| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is yqkF [H]
Identifier: 229916189
GI number: 229916189
Start: 418822
End: 419652
Strand: Direct
Name: yqkF [H]
Synonym: EAT1b_0458
Alternate gene names: 229916189
Gene position: 418822-419652 (Clockwise)
Preceding gene: 229916186
Following gene: 229916191
Centisome position: 13.96
GC content: 50.54
Gene sequence:
>831_bases ATGAGTGAACTCGGACTCGGAACGATGACGATTTTGAAACACGGGGAAAAAGAGGCGAAGAATATCTTAGATGCAGCTAT TCAATCGGGGATTCGCCATATCGATACGGCAGACGTCTATGCGCGACAAGCTGTCGAGCGTGTGATTGGGGAAACGTTAG GTCAAGAACGACAACACCTATTTTTAGCGAGTAAGGGTGGGAATGAACTGACTGAGGATGGTATGCGTTGGAATCCTGAG CCGTCTTATTTAGAGAACGCCTTACACGGGTCGCTCGAGCGATTGAAAACCGATTATCTGGATCTATATTATATACATGG CGGCACGCTCGAGGATGACCTCGACGCAACGATCGAATGGGCACAAAAACAAAAACGAGACGGTCTGATTCGACAAATCG GACTCTCGTCGATTCGTCCGAACGTCATCAACCATTGGGTCAAATCCGGTGCACTCGATGTTCTCATGACGCCGTATTCA CTACTCGACCGCCGGGCAGAGACGCTCGACGTTTCAATCCCCATCGTCGGCCGAGGCGTTCTTGCCAAAGGCCTATTAAC GGATGATTGGGAGACGCGTCTTGGAGATAAGGGATTTGAGGCGTGGCGAAAAGAGGAACTCGCCAGTGAACTGGCGATGA TGCCAACACCGATTCAAGCCTATGCACTCGAAGCCGCAAGTCGGTTCTGTGACGTCGTCTTACCCGGTGCATCTTCAGTC AAGCAATTGAACGAGACGATTCGCGCGTTCGAAACTGAAATCGATGATGAAGTGCTTGATCGCCTACTCGCTCGTTTACC GGTCCATCCATACACAAAACACGTGACCTGA
Upstream 100 bases:
>100_bases CTTCCCGCTCAATCGTTTTTTCTTCCATATGATTACTCCTCACTTTTCGATATACTCTGATTATGAGTCAAACCTACATT TCGAACAAGGAGGAATCCAA
Downstream 100 bases:
>100_bases TCCGCTCAGGTCACGTGTTTTTCGTTGCGTGCTTGAATCTGTTCGATCGCCCAGTCCGCCCATCCGGCATAGTTCTCCAT CATCCGGATCGCATATTCGC
Product: aldo/keto reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 276; Mature: 275
Protein sequence:
>276_residues MSELGLGTMTILKHGEKEAKNILDAAIQSGIRHIDTADVYARQAVERVIGETLGQERQHLFLASKGGNELTEDGMRWNPE PSYLENALHGSLERLKTDYLDLYYIHGGTLEDDLDATIEWAQKQKRDGLIRQIGLSSIRPNVINHWVKSGALDVLMTPYS LLDRRAETLDVSIPIVGRGVLAKGLLTDDWETRLGDKGFEAWRKEELASELAMMPTPIQAYALEAASRFCDVVLPGASSV KQLNETIRAFETEIDDEVLDRLLARLPVHPYTKHVT
Sequences:
>Translated_276_residues MSELGLGTMTILKHGEKEAKNILDAAIQSGIRHIDTADVYARQAVERVIGETLGQERQHLFLASKGGNELTEDGMRWNPE PSYLENALHGSLERLKTDYLDLYYIHGGTLEDDLDATIEWAQKQKRDGLIRQIGLSSIRPNVINHWVKSGALDVLMTPYS LLDRRAETLDVSIPIVGRGVLAKGLLTDDWETRLGDKGFEAWRKEELASELAMMPTPIQAYALEAASRFCDVVLPGASSV KQLNETIRAFETEIDDEVLDRLLARLPVHPYTKHVT >Mature_275_residues SELGLGTMTILKHGEKEAKNILDAAIQSGIRHIDTADVYARQAVERVIGETLGQERQHLFLASKGGNELTEDGMRWNPEP SYLENALHGSLERLKTDYLDLYYIHGGTLEDDLDATIEWAQKQKRDGLIRQIGLSSIRPNVINHWVKSGALDVLMTPYSL LDRRAETLDVSIPIVGRGVLAKGLLTDDWETRLGDKGFEAWRKEELASELAMMPTPIQAYALEAASRFCDVVLPGASSVK QLNETIRAFETEIDDEVLDRLLARLPVHPYTKHVT
Specific function: Unknown
COG id: COG0667
COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldo/keto reductase 2 family [H]
Homologues:
Organism=Escherichia coli, GI1789199, Length=335, Percent_Identity=26.865671641791, Blast_Score=73, Evalue=2e-14, Organism=Escherichia coli, GI1787674, Length=279, Percent_Identity=25.089605734767, Blast_Score=70, Evalue=1e-13, Organism=Escherichia coli, GI1788070, Length=301, Percent_Identity=23.9202657807309, Blast_Score=69, Evalue=5e-13, Organism=Escherichia coli, GI1788081, Length=117, Percent_Identity=37.6068376068376, Blast_Score=64, Evalue=8e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR020471 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: NA
Molecular weight: Translated: 30887; Mature: 30756
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSELGLGTMTILKHGEKEAKNILDAAIQSGIRHIDTADVYARQAVERVIGETLGQERQHL CCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCHHHHEE FLASKGGNELTEDGMRWNPEPSYLENALHGSLERLKTDYLDLYYIHGGTLEDDLDATIEW EEECCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHH AQKQKRDGLIRQIGLSSIRPNVINHWVKSGALDVLMTPYSLLDRRAETLDVSIPIVGRGV HHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHEEECCCCCCHH LAKGLLTDDWETRLGDKGFEAWRKEELASELAMMPTPIQAYALEAASRFCDVVLPGASSV HHHCCCCCCHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHH KQLNETIRAFETEIDDEVLDRLLARLPVHPYTKHVT HHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure SELGLGTMTILKHGEKEAKNILDAAIQSGIRHIDTADVYARQAVERVIGETLGQERQHL CCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCHHHHEE FLASKGGNELTEDGMRWNPEPSYLENALHGSLERLKTDYLDLYYIHGGTLEDDLDATIEW EEECCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHH AQKQKRDGLIRQIGLSSIRPNVINHWVKSGALDVLMTPYSLLDRRAETLDVSIPIVGRGV HHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHEEECCCCCCHH LAKGLLTDDWETRLGDKGFEAWRKEELASELAMMPTPIQAYALEAASRFCDVVLPGASSV HHHCCCCCCHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHH KQLNETIRAFETEIDDEVLDRLLARLPVHPYTKHVT HHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]