Definition Exiguobacterium sp. AT1b, complete genome.
Accession NC_012673
Length 2,999,895

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The map label for this gene is yqkF [H]

Identifier: 229916189

GI number: 229916189

Start: 418822

End: 419652

Strand: Direct

Name: yqkF [H]

Synonym: EAT1b_0458

Alternate gene names: 229916189

Gene position: 418822-419652 (Clockwise)

Preceding gene: 229916186

Following gene: 229916191

Centisome position: 13.96

GC content: 50.54

Gene sequence:

>831_bases
ATGAGTGAACTCGGACTCGGAACGATGACGATTTTGAAACACGGGGAAAAAGAGGCGAAGAATATCTTAGATGCAGCTAT
TCAATCGGGGATTCGCCATATCGATACGGCAGACGTCTATGCGCGACAAGCTGTCGAGCGTGTGATTGGGGAAACGTTAG
GTCAAGAACGACAACACCTATTTTTAGCGAGTAAGGGTGGGAATGAACTGACTGAGGATGGTATGCGTTGGAATCCTGAG
CCGTCTTATTTAGAGAACGCCTTACACGGGTCGCTCGAGCGATTGAAAACCGATTATCTGGATCTATATTATATACATGG
CGGCACGCTCGAGGATGACCTCGACGCAACGATCGAATGGGCACAAAAACAAAAACGAGACGGTCTGATTCGACAAATCG
GACTCTCGTCGATTCGTCCGAACGTCATCAACCATTGGGTCAAATCCGGTGCACTCGATGTTCTCATGACGCCGTATTCA
CTACTCGACCGCCGGGCAGAGACGCTCGACGTTTCAATCCCCATCGTCGGCCGAGGCGTTCTTGCCAAAGGCCTATTAAC
GGATGATTGGGAGACGCGTCTTGGAGATAAGGGATTTGAGGCGTGGCGAAAAGAGGAACTCGCCAGTGAACTGGCGATGA
TGCCAACACCGATTCAAGCCTATGCACTCGAAGCCGCAAGTCGGTTCTGTGACGTCGTCTTACCCGGTGCATCTTCAGTC
AAGCAATTGAACGAGACGATTCGCGCGTTCGAAACTGAAATCGATGATGAAGTGCTTGATCGCCTACTCGCTCGTTTACC
GGTCCATCCATACACAAAACACGTGACCTGA

Upstream 100 bases:

>100_bases
CTTCCCGCTCAATCGTTTTTTCTTCCATATGATTACTCCTCACTTTTCGATATACTCTGATTATGAGTCAAACCTACATT
TCGAACAAGGAGGAATCCAA

Downstream 100 bases:

>100_bases
TCCGCTCAGGTCACGTGTTTTTCGTTGCGTGCTTGAATCTGTTCGATCGCCCAGTCCGCCCATCCGGCATAGTTCTCCAT
CATCCGGATCGCATATTCGC

Product: aldo/keto reductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 276; Mature: 275

Protein sequence:

>276_residues
MSELGLGTMTILKHGEKEAKNILDAAIQSGIRHIDTADVYARQAVERVIGETLGQERQHLFLASKGGNELTEDGMRWNPE
PSYLENALHGSLERLKTDYLDLYYIHGGTLEDDLDATIEWAQKQKRDGLIRQIGLSSIRPNVINHWVKSGALDVLMTPYS
LLDRRAETLDVSIPIVGRGVLAKGLLTDDWETRLGDKGFEAWRKEELASELAMMPTPIQAYALEAASRFCDVVLPGASSV
KQLNETIRAFETEIDDEVLDRLLARLPVHPYTKHVT

Sequences:

>Translated_276_residues
MSELGLGTMTILKHGEKEAKNILDAAIQSGIRHIDTADVYARQAVERVIGETLGQERQHLFLASKGGNELTEDGMRWNPE
PSYLENALHGSLERLKTDYLDLYYIHGGTLEDDLDATIEWAQKQKRDGLIRQIGLSSIRPNVINHWVKSGALDVLMTPYS
LLDRRAETLDVSIPIVGRGVLAKGLLTDDWETRLGDKGFEAWRKEELASELAMMPTPIQAYALEAASRFCDVVLPGASSV
KQLNETIRAFETEIDDEVLDRLLARLPVHPYTKHVT
>Mature_275_residues
SELGLGTMTILKHGEKEAKNILDAAIQSGIRHIDTADVYARQAVERVIGETLGQERQHLFLASKGGNELTEDGMRWNPEP
SYLENALHGSLERLKTDYLDLYYIHGGTLEDDLDATIEWAQKQKRDGLIRQIGLSSIRPNVINHWVKSGALDVLMTPYSL
LDRRAETLDVSIPIVGRGVLAKGLLTDDWETRLGDKGFEAWRKEELASELAMMPTPIQAYALEAASRFCDVVLPGASSVK
QLNETIRAFETEIDDEVLDRLLARLPVHPYTKHVT

Specific function: Unknown

COG id: COG0667

COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldo/keto reductase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1789199, Length=335, Percent_Identity=26.865671641791, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1787674, Length=279, Percent_Identity=25.089605734767, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1788070, Length=301, Percent_Identity=23.9202657807309, Blast_Score=69, Evalue=5e-13,
Organism=Escherichia coli, GI1788081, Length=117, Percent_Identity=37.6068376068376, Blast_Score=64, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001395
- InterPro:   IPR020471
- InterPro:   IPR023210 [H]

Pfam domain/function: PF00248 Aldo_ket_red [H]

EC number: NA

Molecular weight: Translated: 30887; Mature: 30756

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSELGLGTMTILKHGEKEAKNILDAAIQSGIRHIDTADVYARQAVERVIGETLGQERQHL
CCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCHHHHEE
FLASKGGNELTEDGMRWNPEPSYLENALHGSLERLKTDYLDLYYIHGGTLEDDLDATIEW
EEECCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHH
AQKQKRDGLIRQIGLSSIRPNVINHWVKSGALDVLMTPYSLLDRRAETLDVSIPIVGRGV
HHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHEEECCCCCCHH
LAKGLLTDDWETRLGDKGFEAWRKEELASELAMMPTPIQAYALEAASRFCDVVLPGASSV
HHHCCCCCCHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHH
KQLNETIRAFETEIDDEVLDRLLARLPVHPYTKHVT
HHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
SELGLGTMTILKHGEKEAKNILDAAIQSGIRHIDTADVYARQAVERVIGETLGQERQHL
CCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCHHHHEE
FLASKGGNELTEDGMRWNPEPSYLENALHGSLERLKTDYLDLYYIHGGTLEDDLDATIEW
EEECCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHH
AQKQKRDGLIRQIGLSSIRPNVINHWVKSGALDVLMTPYSLLDRRAETLDVSIPIVGRGV
HHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHEEECCCCCCHH
LAKGLLTDDWETRLGDKGFEAWRKEELASELAMMPTPIQAYALEAASRFCDVVLPGASSV
HHHCCCCCCHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCHHHH
KQLNETIRAFETEIDDEVLDRLLARLPVHPYTKHVT
HHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]