| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229916151
Identifier: 229916151
GI number: 229916151
Start: 384227
End: 384745
Strand: Reverse
Name: 229916151
Synonym: EAT1b_0420
Alternate gene names: NA
Gene position: 384745-384227 (Counterclockwise)
Preceding gene: 229916152
Following gene: 229916149
Centisome position: 12.83
GC content: 43.74
Gene sequence:
>519_bases ATGGAGTTTGAGGATCTATTCTTCTATCATGGGATGATTCATGTGTTTGATTTTCAGCATGATTTAGAATCGAGTCGCCT CACCTTTCAAGTGAAATTACTCGATCACCAGAGAAAGCGAAACACGACGTTCCGTGAACGAGTCGAAGTGGGCCGGGTTC ATTCCCAGCGAGAAGTGATCAATGTAAAACTATGCTTTGAAGACGTCATCTATATGGAGGTCATTCAAGAGTCATTTGCG GATGGAATCATCGATGAACCGTCAGATGAGTTCGAAGGAACGCAGATCAAACGATTCGAGCAATCCGGGTATTTGGATTT CTTGACACGAACGCGTTTCTCGTTTTGGGAGTTGATACATGACGATTCAACACCGTTCACGCACTATCGTATTTGCGGTC TGAACTCAGTTTTAGAAATCATCACGCTTTCGGAACCGACCGTTGCATCTGTGATTTCACTCGATTGTAATCGAAAGGGG AGTCCAACCGTATATTTCAGTGGAAAGTTCTACACGTAA
Upstream 100 bases:
>100_bases CTGAAGCGTGTATACTTTCACTTTTCATTTTAGGAGATGTTAGGCGAGGCTATGGCGTCGGAGTATTTCAATACGAAAGT GACGAAAAGGAGGAGTGACA
Downstream 100 bases:
>100_bases AGGCGCCCTCTCTTAGAGAAGGCGCCTCTTGTTTATACAGAAGATGCGGTTAAAATGGACTGTTCGGTCAATCGCCCAAT CCAGATTAACGGAATGGTCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 172; Mature: 172
Protein sequence:
>172_residues MEFEDLFFYHGMIHVFDFQHDLESSRLTFQVKLLDHQRKRNTTFRERVEVGRVHSQREVINVKLCFEDVIYMEVIQESFA DGIIDEPSDEFEGTQIKRFEQSGYLDFLTRTRFSFWELIHDDSTPFTHYRICGLNSVLEIITLSEPTVASVISLDCNRKG SPTVYFSGKFYT
Sequences:
>Translated_172_residues MEFEDLFFYHGMIHVFDFQHDLESSRLTFQVKLLDHQRKRNTTFRERVEVGRVHSQREVINVKLCFEDVIYMEVIQESFA DGIIDEPSDEFEGTQIKRFEQSGYLDFLTRTRFSFWELIHDDSTPFTHYRICGLNSVLEIITLSEPTVASVISLDCNRKG SPTVYFSGKFYT >Mature_172_residues MEFEDLFFYHGMIHVFDFQHDLESSRLTFQVKLLDHQRKRNTTFRERVEVGRVHSQREVINVKLCFEDVIYMEVIQESFA DGIIDEPSDEFEGTQIKRFEQSGYLDFLTRTRFSFWELIHDDSTPFTHYRICGLNSVLEIITLSEPTVASVISLDCNRKG SPTVYFSGKFYT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20329; Mature: 20329
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEFEDLFFYHGMIHVFDFQHDLESSRLTFQVKLLDHQRKRNTTFRERVEVGRVHSQREVI CCCHHHHHHHCEEEEEECHHCCCCCEEEEEEEEECCHHHCCCHHHHHHHHHHCCCCCCEE NVKLCFEDVIYMEVIQESFADGIIDEPSDEFEGTQIKRFEQSGYLDFLTRTRFSFWELIH EEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHC DDSTPFTHYRICGLNSVLEIITLSEPTVASVISLDCNRKGSPTVYFSGKFYT CCCCCCCEEEEECHHHHHHHHCCCCCCHHHEEEECCCCCCCCEEEECCEECC >Mature Secondary Structure MEFEDLFFYHGMIHVFDFQHDLESSRLTFQVKLLDHQRKRNTTFRERVEVGRVHSQREVI CCCHHHHHHHCEEEEEECHHCCCCCEEEEEEEEECCHHHCCCHHHHHHHHHHCCCCCCEE NVKLCFEDVIYMEVIQESFADGIIDEPSDEFEGTQIKRFEQSGYLDFLTRTRFSFWELIH EEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHC DDSTPFTHYRICGLNSVLEIITLSEPTVASVISLDCNRKGSPTVYFSGKFYT CCCCCCCEEEEECHHHHHHHHCCCCCCHHHEEEECCCCCCCCEEEECCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA