| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
Click here to switch to the map view.
The map label for this gene is 229916134
Identifier: 229916134
GI number: 229916134
Start: 367706
End: 367939
Strand: Reverse
Name: 229916134
Synonym: EAT1b_0403
Alternate gene names: NA
Gene position: 367939-367706 (Counterclockwise)
Preceding gene: 229916135
Following gene: 229916133
Centisome position: 12.27
GC content: 42.74
Gene sequence:
>234_bases TTGAGTACATTATTCTGGATTCTTCTTGTCGTGGCAGCACTCATCGGGGGTATCGCGATTGGATTCTTTATCGCGCGTAA ATACATGATGAACTACCTTGAACAGAACCCGCCAATCAATGAAGATATGATTCGTACGTTGATGATGCAGATGGGTCAAA AGCCATCACAGAAGAAAGTCAACCAAGTGATGCGCGCCATGAACGTGCAGATGAAAAACGAAAAGAAATCATAA
Upstream 100 bases:
>100_bases CAATCGTTTGGCCGTCACTTTTTTTCTGGACGACTAGCGAAGTTGTTCAATTTAGTGTATAGTAAAAAACGATGTTTCAT ATGGTAGAGGAGGTAAAGCC
Downstream 100 bases:
>100_bases TCAATCACGAAAGCACTTCGGTTCCCGAAGTGCTTTTTTGTTTCCTCTTTTTGTTAGACAATCGAACAGACTTTCGCTAC GATTAATAAATAATCTTCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 77; Mature: 76
Protein sequence:
>77_residues MSTLFWILLVVAALIGGIAIGFFIARKYMMNYLEQNPPINEDMIRTLMMQMGQKPSQKKVNQVMRAMNVQMKNEKKS
Sequences:
>Translated_77_residues MSTLFWILLVVAALIGGIAIGFFIARKYMMNYLEQNPPINEDMIRTLMMQMGQKPSQKKVNQVMRAMNVQMKNEKKS >Mature_76_residues STLFWILLVVAALIGGIAIGFFIARKYMMNYLEQNPPINEDMIRTLMMQMGQKPSQKKVNQVMRAMNVQMKNEKKS
Specific function: Unknown
COG id: COG3763
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0154 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y403_EXISA (C4L2S7)
Other databases:
- EMBL: CP001615 - RefSeq: YP_002884780.1 - GeneID: 7868518 - GenomeReviews: CP001615_GR - KEGG: eat:EAT1b_0403 - OMA: FYGARAY - ProtClustDB: CLSK2489290 - HAMAP: MF_00363 - InterPro: IPR005359 - ProDom: PD048972
Pfam domain/function: PF03672 UPF0154
EC number: NA
Molecular weight: Translated: 8911; Mature: 8780
Theoretical pI: Translated: 10.75; Mature: 10.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x22ebb9bc)-;
Cys/Met content:
0.0 %Cys (Translated Protein) 13.0 %Met (Translated Protein) 13.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 11.8 %Met (Mature Protein) 11.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTLFWILLVVAALIGGIAIGFFIARKYMMNYLEQNPPINEDMIRTLMMQMGQKPSQKKV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHH NQVMRAMNVQMKNEKKS HHHHHHHHHHHHHCCCH >Mature Secondary Structure STLFWILLVVAALIGGIAIGFFIARKYMMNYLEQNPPINEDMIRTLMMQMGQKPSQKKV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHH NQVMRAMNVQMKNEKKS HHHHHHHHHHHHHCCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA