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The map label for this gene is ccdC [H]

Identifier: 229916129

GI number: 229916129

Start: 362454

End: 362906

Strand: Reverse

Name: ccdC [H]

Synonym: EAT1b_0398

Alternate gene names: 229916129

Gene position: 362906-362454 (Counterclockwise)

Preceding gene: 229916130

Following gene: 229916125

Centisome position: 12.1

GC content: 46.58

Gene sequence:

>453_bases
ATGTTATGGGGGTCGACTCTCGTTGCGTTGTTAATGGGTATCGTAGCGAGCTTTGTTCGTGTAAAAGCATCGGCAAAGCC
GACGAATGCGAAGAAAATTTTAATCCCACCACTTGCGATGACGACCGGGATGATTCAGTTTTTGATTCCTGCGTTTCGCT
TGTCATGGGTCGAAGTGGCTGAGGCTCTTGCAGTCGGGCTCATCTTCAGTCTGTTTTTGATTAAGACATCAAACTTTGAA
AAACGGGACGGCGAAGTGTATCTCTCACGATCGAAAGCATTTTTCGTGGTCGTGTTCGCACTCCTTGCCATTCGTACAGC
AATGAAGATTTGGGTCGGTCATGAGGTCGATCTCTTCTCGACCGGCGGATTGTTTTATTTGATTGCTTGGGGGATGATTG
TCCCGTGGCGAATCGCCATGTATCAAAAATATAAACGAATCGCAATCACGTAA

Upstream 100 bases:

>100_bases
TTCGGCGTACTATTATATTTTGACGGAATGAATCGGTTCGCTGCATGGATGAGCGAGCTTGTCGGATTCACCGGATTTTA
AGGGGTTGACCGAGATGTCA

Downstream 100 bases:

>100_bases
AAATGGAGTGGCGTTGAGCCACTCCATTTTTTATTTAGTCTGCTTTCGTAGCGGCGACTTCCGTCTCCGCGTCGATTCCA
GTGTTCGCCTTGACGAGGAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 150; Mature: 150

Protein sequence:

>150_residues
MLWGSTLVALLMGIVASFVRVKASAKPTNAKKILIPPLAMTTGMIQFLIPAFRLSWVEVAEALAVGLIFSLFLIKTSNFE
KRDGEVYLSRSKAFFVVVFALLAIRTAMKIWVGHEVDLFSTGGLFYLIAWGMIVPWRIAMYQKYKRIAIT

Sequences:

>Translated_150_residues
MLWGSTLVALLMGIVASFVRVKASAKPTNAKKILIPPLAMTTGMIQFLIPAFRLSWVEVAEALAVGLIFSLFLIKTSNFE
KRDGEVYLSRSKAFFVVVFALLAIRTAMKIWVGHEVDLFSTGGLFYLIAWGMIVPWRIAMYQKYKRIAIT
>Mature_150_residues
MLWGSTLVALLMGIVASFVRVKASAKPTNAKKILIPPLAMTTGMIQFLIPAFRLSWVEVAEALAVGLIFSLFLIKTSNFE
KRDGEVYLSRSKAFFVVVFALLAIRTAMKIWVGHEVDLFSTGGLFYLIAWGMIVPWRIAMYQKYKRIAIT

Specific function: Unknown

COG id: COG4846

COG function: function code O; Membrane protein involved in cytochrome C biogenesis

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009916 [H]

Pfam domain/function: PF07301 DUF1453 [H]

EC number: NA

Molecular weight: Translated: 16821; Mature: 16821

Theoretical pI: Translated: 10.87; Mature: 10.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLWGSTLVALLMGIVASFVRVKASAKPTNAKKILIPPLAMTTGMIQFLIPAFRLSWVEVA
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHH
EALAVGLIFSLFLIKTSNFEKRDGEVYLSRSKAFFVVVFALLAIRTAMKIWVGHEVDLFS
HHHHHHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
TGGLFYLIAWGMIVPWRIAMYQKYKRIAIT
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLWGSTLVALLMGIVASFVRVKASAKPTNAKKILIPPLAMTTGMIQFLIPAFRLSWVEVA
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHH
EALAVGLIFSLFLIKTSNFEKRDGEVYLSRSKAFFVVVFALLAIRTAMKIWVGHEVDLFS
HHHHHHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
TGGLFYLIAWGMIVPWRIAMYQKYKRIAIT
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9068642; 8969507; 9384377 [H]