Definition Exiguobacterium sp. AT1b, complete genome.
Accession NC_012673
Length 2,999,895

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The map label for this gene is 229916101

Identifier: 229916101

GI number: 229916101

Start: 332199

End: 332795

Strand: Reverse

Name: 229916101

Synonym: EAT1b_0370

Alternate gene names: NA

Gene position: 332795-332199 (Counterclockwise)

Preceding gene: 229916106

Following gene: 229916095

Centisome position: 11.09

GC content: 40.2

Gene sequence:

>597_bases
GTGGACGGTAAAAATAAAATTCTAGATGCAGCGAGAACGGTCATTATTCGAAGTGGAGTGAACGGGGCAACAGTCAGAGC
GATTGCAATCGAGGCGAATATGACGACAGGAGCCATCTACCATCATTACAAAAATAAAGAGGATTTATTGTACGATTTAA
TGAATGAGAGCTTGTCTGTCTCCTCTCAAATCGCAAAAGAAATGACGGGCGATTCGTATTCTAAAGAACGCATCAAAATG
GAGATTGCACGAAATACGGCGGAACGGTTTCATAAAGATGCAGAGAACCGTCTGCAGTATCATTTTGCTCATGAAGTACT
ACTGGGCAATATGGATGCACAACTGAAATTAAAGGACAAATATGCAGAATGGACAAAACAAATCGAACAAATTCTGATTC
ATTTGTACGGATTAGAAAACACTCGTCTAAACAATGCGTTCAGTTCATGGTTGATAGGGGCAGTCGACGGGGTCGTCTTA
CAATATCTACTAGACGTCAATGAAAATTCTATAGATGAGATGATGGAGGTGTTCGATCTCCTACTTGAGAAAGGACTTCC
TTCTTTCGTAGAACGTTTGAATGAACAGGATAAATAA

Upstream 100 bases:

>100_bases
TGTTCAGTCAATGTGAATTATTTCACAAAATTTAGTCCTGAGCACTTGCATTGGCAGAGCTATGTTATTCTAAAAATGGA
CTCGAAAGGGGAGGATAATT

Downstream 100 bases:

>100_bases
AAAGACCCGTCACAGAGTAACGTGACGGGTGCTTGACGATTAAGAATAGGTCATCGTGCTCATGCATACTGAGGCTTCTT
TCAATTGTTCACGGACGGCA

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: TetR-Family Transcriptional Regulator

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MDGKNKILDAARTVIIRSGVNGATVRAIAIEANMTTGAIYHHYKNKEDLLYDLMNESLSVSSQIAKEMTGDSYSKERIKM
EIARNTAERFHKDAENRLQYHFAHEVLLGNMDAQLKLKDKYAEWTKQIEQILIHLYGLENTRLNNAFSSWLIGAVDGVVL
QYLLDVNENSIDEMMEVFDLLLEKGLPSFVERLNEQDK

Sequences:

>Translated_198_residues
MDGKNKILDAARTVIIRSGVNGATVRAIAIEANMTTGAIYHHYKNKEDLLYDLMNESLSVSSQIAKEMTGDSYSKERIKM
EIARNTAERFHKDAENRLQYHFAHEVLLGNMDAQLKLKDKYAEWTKQIEQILIHLYGLENTRLNNAFSSWLIGAVDGVVL
QYLLDVNENSIDEMMEVFDLLLEKGLPSFVERLNEQDK
>Mature_198_residues
MDGKNKILDAARTVIIRSGVNGATVRAIAIEANMTTGAIYHHYKNKEDLLYDLMNESLSVSSQIAKEMTGDSYSKERIKM
EIARNTAERFHKDAENRLQYHFAHEVLLGNMDAQLKLKDKYAEWTKQIEQILIHLYGLENTRLNNAFSSWLIGAVDGVVL
QYLLDVNENSIDEMMEVFDLLLEKGLPSFVERLNEQDK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22668; Mature: 22668

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDGKNKILDAARTVIIRSGVNGATVRAIAIEANMTTGAIYHHYKNKEDLLYDLMNESLSV
CCCHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCHHHHHHHHCCHHHHHHHHHHHHHHH
SSQIAKEMTGDSYSKERIKMEIARNTAERFHKDAENRLQYHFAHEVLLGNMDAQLKLKDK
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHH
YAEWTKQIEQILIHLYGLENTRLNNAFSSWLIGAVDGVVLQYLLDVNENSIDEMMEVFDL
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
LLEKGLPSFVERLNEQDK
HHHCCCHHHHHHHCCCCC
>Mature Secondary Structure
MDGKNKILDAARTVIIRSGVNGATVRAIAIEANMTTGAIYHHYKNKEDLLYDLMNESLSV
CCCHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCHHHHHHHHCCHHHHHHHHHHHHHHH
SSQIAKEMTGDSYSKERIKMEIARNTAERFHKDAENRLQYHFAHEVLLGNMDAQLKLKDK
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHH
YAEWTKQIEQILIHLYGLENTRLNNAFSSWLIGAVDGVVLQYLLDVNENSIDEMMEVFDL
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
LLEKGLPSFVERLNEQDK
HHHCCCHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA