| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
Click here to switch to the map view.
The map label for this gene is yhaU [H]
Identifier: 229916094
GI number: 229916094
Start: 324101
End: 325270
Strand: Direct
Name: yhaU [H]
Synonym: EAT1b_0363
Alternate gene names: 229916094
Gene position: 324101-325270 (Clockwise)
Preceding gene: 229916093
Following gene: 229916096
Centisome position: 10.8
GC content: 46.58
Gene sequence:
>1170_bases ATGGATGGATTAAATATCATCGTGTTGCTCGGATTGGCGCTCACCCTCATCTCTGTCCTCAGTCTCCTGATTGAACGATT ATTTTTCCCGAGTATTTTAGCGTTTATCGCAATCGGGGTCGGGGTCGGTTTTTTCTGGGATGGGAATGAAGTCTTTAAAG TCGCGGGAGAGATTGGAATCATTCTTTTATTTTTCCTACTCGGTCTAAAGTTTCCACTACGTGAACTTTGGAAGCGCATG CGGAAAGTGTGGAAGGCGGGAATACTCGATATCATTCTGTCATTCGGAGTATCGTTCGGGATTGCATTAGCATTTGGTCT CGACTTCCCTCGCGCCTTTTTAATCGGGGCCGTCTTATATGCGACGAGCTCCTCCATCTCTGCGAAGCTGCTTGAGCGGC ATTCCGAAAAACATGAAGATATTAAAGAGTTTGTGCTCGCATTACTGATCTTTGAGGATATTTTTGCCCCACTGCTCTTG ACGGTCGCCCCTTTCATCATCCAAGAAGAACCGGTTGCGATGTCCGATATCGGAAAAGTGTTCGCAGGATTTCTTATATT TGGCGTACTCTTGTTCATCGGTTCAAGCTTCGTATCCAAGCAACAAAAATTTTCGAAGCACTTACTGCGACAAGATGATG CGAGCATCGGTCTGATTGGACTCATTCTCTTTTTCGCGGGAATCGGCATGGTGTTTGGATTATCTGAGATTTTAGGGGCA TTTATCGCCGGGATCATGCTCGCCGATATCCACGATGTGAGACCGCTCAAGCGTTTGACCGTACCCGTCCGAGATTTATT CTTGCCGATCTTTTTCATTTCGTTCGGAATCTCGATCAACCTCGAGAAAGGCGTCATCGTAAATGCACTCTTCTTCGTCT TGATTGTGTGGGGAGTATTATCCAAATGGATTGTCGGACGCGTCGGGGGCAGAATCTATGGCTTGACGCGTGTTCAAGCC AATGAAGCCGGGTTCTCACTCGCGCCACGTGGGGAGTTCTCTATTTTATTTACCGCCCTTTCGAACGGGGCCATCAACTT GTTTGTCGGTCTCTATATTTTCGTGTCAGCCATTGTCGGAATCATTCTGTTCCGTTTCTCAGAGTACTTGGCAGAAAAAA CGGAGAAAACCCTCACGAAAGTCTTACCTGACGAGAAAAAAGAAGAATGA
Upstream 100 bases:
>100_bases CGACAGTTCGGTTTTGATTACTCACGACCTGAATCCGTCGGAATGGAGTATCAATGGAATCAAAGAGAAAGCTAATTGGG GTCATGAGAGGAGATGACGT
Downstream 100 bases:
>100_bases ATTGGCGGACCCATACGCTGGGTCCGCCTGTTTTGTGCGTTAGTCTTTCGCTAGTTTGTTGTGCCGTTTTTTACGCCATA CGATATAGATGATGACCCCG
Product: sodium/hydrogen exchanger
Products: Proton [Cytoplasm]; K (I) [Periplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 389; Mature: 389
Protein sequence:
>389_residues MDGLNIIVLLGLALTLISVLSLLIERLFFPSILAFIAIGVGVGFFWDGNEVFKVAGEIGIILLFFLLGLKFPLRELWKRM RKVWKAGILDIILSFGVSFGIALAFGLDFPRAFLIGAVLYATSSSISAKLLERHSEKHEDIKEFVLALLIFEDIFAPLLL TVAPFIIQEEPVAMSDIGKVFAGFLIFGVLLFIGSSFVSKQQKFSKHLLRQDDASIGLIGLILFFAGIGMVFGLSEILGA FIAGIMLADIHDVRPLKRLTVPVRDLFLPIFFISFGISINLEKGVIVNALFFVLIVWGVLSKWIVGRVGGRIYGLTRVQA NEAGFSLAPRGEFSILFTALSNGAINLFVGLYIFVSAIVGIILFRFSEYLAEKTEKTLTKVLPDEKKEE
Sequences:
>Translated_389_residues MDGLNIIVLLGLALTLISVLSLLIERLFFPSILAFIAIGVGVGFFWDGNEVFKVAGEIGIILLFFLLGLKFPLRELWKRM RKVWKAGILDIILSFGVSFGIALAFGLDFPRAFLIGAVLYATSSSISAKLLERHSEKHEDIKEFVLALLIFEDIFAPLLL TVAPFIIQEEPVAMSDIGKVFAGFLIFGVLLFIGSSFVSKQQKFSKHLLRQDDASIGLIGLILFFAGIGMVFGLSEILGA FIAGIMLADIHDVRPLKRLTVPVRDLFLPIFFISFGISINLEKGVIVNALFFVLIVWGVLSKWIVGRVGGRIYGLTRVQA NEAGFSLAPRGEFSILFTALSNGAINLFVGLYIFVSAIVGIILFRFSEYLAEKTEKTLTKVLPDEKKEE >Mature_389_residues MDGLNIIVLLGLALTLISVLSLLIERLFFPSILAFIAIGVGVGFFWDGNEVFKVAGEIGIILLFFLLGLKFPLRELWKRM RKVWKAGILDIILSFGVSFGIALAFGLDFPRAFLIGAVLYATSSSISAKLLERHSEKHEDIKEFVLALLIFEDIFAPLLL TVAPFIIQEEPVAMSDIGKVFAGFLIFGVLLFIGSSFVSKQQKFSKHLLRQDDASIGLIGLILFFAGIGMVFGLSEILGA FIAGIMLADIHDVRPLKRLTVPVRDLFLPIFFISFGISINLEKGVIVNALFFVLIVWGVLSKWIVGRVGGRIYGLTRVQA NEAGFSLAPRGEFSILFTALSNGAINLFVGLYIFVSAIVGIILFRFSEYLAEKTEKTLTKVLPDEKKEE
Specific function: Potassium/proton antiporter that mediates the efflux of potassium ions from the cell. Potassium antiport activity requires the presence of khtT. Has higher activity at alkaline pH. Can also mediate rubidium/proton antiport. Has no permeability for sodium
COG id: COG0475
COG function: function code P; Kef-type K+ transport systems, membrane components
Gene ontology:
Cell location: Cell membrane [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family [H]
Homologues:
Organism=Escherichia coli, GI1786232, Length=387, Percent_Identity=25.0645994832041, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1789749, Length=373, Percent_Identity=26.0053619302949, Blast_Score=65, Evalue=6e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006153 [H]
Pfam domain/function: PF00999 Na_H_Exchanger [H]
EC number: NA
Molecular weight: Translated: 42903; Mature: 42903
Theoretical pI: Translated: 8.81; Mature: 8.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDGLNIIVLLGLALTLISVLSLLIERLFFPSILAFIAIGVGVGFFWDGNEVFKVAGEIGI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHH ILLFFLLGLKFPLRELWKRMRKVWKAGILDIILSFGVSFGIALAFGLDFPRAFLIGAVLY HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH ATSSSISAKLLERHSEKHEDIKEFVLALLIFEDIFAPLLLTVAPFIIQEEPVAMSDIGKV HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH FAGFLIFGVLLFIGSSFVSKQQKFSKHLLRQDDASIGLIGLILFFAGIGMVFGLSEILGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH FIAGIMLADIHDVRPLKRLTVPVRDLFLPIFFISFGISINLEKGVIVNALFFVLIVWGVL HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHHHHHHHHHHHHHH SKWIVGRVGGRIYGLTRVQANEAGFSLAPRGEFSILFTALSNGAINLFVGLYIFVSAIVG HHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHH IILFRFSEYLAEKTEKTLTKVLPDEKKEE HHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MDGLNIIVLLGLALTLISVLSLLIERLFFPSILAFIAIGVGVGFFWDGNEVFKVAGEIGI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHH ILLFFLLGLKFPLRELWKRMRKVWKAGILDIILSFGVSFGIALAFGLDFPRAFLIGAVLY HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH ATSSSISAKLLERHSEKHEDIKEFVLALLIFEDIFAPLLLTVAPFIIQEEPVAMSDIGKV HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH FAGFLIFGVLLFIGSSFVSKQQKFSKHLLRQDDASIGLIGLILFFAGIGMVFGLSEILGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH FIAGIMLADIHDVRPLKRLTVPVRDLFLPIFFISFGISINLEKGVIVNALFFVLIVWGVL HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHHHHHHHHHHHHHH SKWIVGRVGGRIYGLTRVQANEAGFSLAPRGEFSILFTALSNGAINLFVGLYIFVSAIVG HHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHH IILFRFSEYLAEKTEKTLTKVLPDEKKEE HHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; K (I) [Cytoplasm] [C]
Specific reaction: Proton [Periplasm] + K (I) [Cytoplasm] = Proton [Cytoplasm] + K (I) [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9579061; 9384377 [H]