| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is yrbG [C]
Identifier: 229916089
GI number: 229916089
Start: 320119
End: 321108
Strand: Reverse
Name: yrbG [C]
Synonym: EAT1b_0358
Alternate gene names: 229916089
Gene position: 321108-320119 (Counterclockwise)
Preceding gene: 229916090
Following gene: 229916088
Centisome position: 10.7
GC content: 48.59
Gene sequence:
>990_bases ATGGTATTTGTTTATTTCTTATTGGCCGCGGCCATCACTGTATATGCCGCCATCAAATTGTCAACGTACGCCGACGTCAT GACTGAAAAATCGAAAATGGGCGGGATGCTCGTCGGTACGGTTTTATTGGCAGGAGCGACGTCGCTCCCGGAAGTGACAA CGAGTATATCGGCTGTCATGATTGACAACCCCGACATTGCCATCGGGAACATGCTTGGGAGTAACCTATTCAATATCTTT ATCTTAGCGATGTTCGACCTATACTTCCGACAGAAGCAATTATTCAACTATGCGAGCCGGGACCATCTGTATACGGCTGG ACTTGGGTTACTCTTGACCGTCACGACGTTGATCGCTTTGATCGTTCGCGTCGATATGACGTTTATCGGAATCGGAGTCG ACGCACTCCTCATTGCGATTCTTTACGGCATCGGAATCTATTATATCGGGAAACAACCGAAAGATCCGGTCGCGGAACAA GAGGTCGAAGAAGAAGTGGTTGTTGGGAAATATGAAGACATCACGCTCAAACGTGCGGTCTTTGGATTCATCATCGCTGC AATCGTGATCATGGCGGCAGGAACAGCCCTTTCGATCACGGGAGACCAGATTGCCGTCGTCACAGGACTCGGTTCTAGCT TTGTCGGTAGCTTCTTGATTGCGGCATCGACGTCACTCCCGGAAGCGGTCGCCGTGTTCATGGCGCTCAAGCTTCGTAAT GTCAACTTGGCATTCGGTTCGATTCTCGGTTCGAATATCTTCAATATGCTCATTATCGCCATGTCCGATGTCTTTTATCG GAATGGATCAATCCTCGCAGATGTCTCGACGTCACACCTCGTATCTGCGGTCGGGATCACCATCCTATCGATCCTTGTGA TGTACAGTGTGCTCAGACAAAATGTCACGTCGAAGGTACGTTATGTGATTCCTTCGTTACTCGTTGTCGTCGTCTATTTC GTTTCGTCTTACTTGATCTTTATCGGGTAA
Upstream 100 bases:
>100_bases CACTCGGTCCATCGAGCTTTTACAAGTCCGCAAGACCTTTTTATGGGCGTTTTTGTCGTCCATAAAAAGGTCTTTTTTGT TTACCCAAGGAGGAGAAAAA
Downstream 100 bases:
>100_bases ACTCATACATCAGCCTTAGGGCTGATGTTTTTTTAATTGGGAATGCGAATTCATTGCTTCGGGTATAGGGGAATGGAAGG AGGGGTGGCGATGCAAATGC
Product: sodium/calcium exchanger membrane region
Products: Na (I) [Cytoplasm]; Ca (II) [Periplasm] [C]
Alternate protein names: Cation Antiporter; Sodium/Calcium Exchanger Membrane Protein; Cation Transporter; Sodium-Calcium Exchanger; Sodium/Calcium Antiporter; Sodium/Calcium Exchanger Protein; Ca2+Cation Antiporter CaCA Family; Ca2+/Na+ Antiporter; Ca2+/H+ Antiporter
Number of amino acids: Translated: 329; Mature: 329
Protein sequence:
>329_residues MVFVYFLLAAAITVYAAIKLSTYADVMTEKSKMGGMLVGTVLLAGATSLPEVTTSISAVMIDNPDIAIGNMLGSNLFNIF ILAMFDLYFRQKQLFNYASRDHLYTAGLGLLLTVTTLIALIVRVDMTFIGIGVDALLIAILYGIGIYYIGKQPKDPVAEQ EVEEEVVVGKYEDITLKRAVFGFIIAAIVIMAAGTALSITGDQIAVVTGLGSSFVGSFLIAASTSLPEAVAVFMALKLRN VNLAFGSILGSNIFNMLIIAMSDVFYRNGSILADVSTSHLVSAVGITILSILVMYSVLRQNVTSKVRYVIPSLLVVVVYF VSSYLIFIG
Sequences:
>Translated_329_residues MVFVYFLLAAAITVYAAIKLSTYADVMTEKSKMGGMLVGTVLLAGATSLPEVTTSISAVMIDNPDIAIGNMLGSNLFNIF ILAMFDLYFRQKQLFNYASRDHLYTAGLGLLLTVTTLIALIVRVDMTFIGIGVDALLIAILYGIGIYYIGKQPKDPVAEQ EVEEEVVVGKYEDITLKRAVFGFIIAAIVIMAAGTALSITGDQIAVVTGLGSSFVGSFLIAASTSLPEAVAVFMALKLRN VNLAFGSILGSNIFNMLIIAMSDVFYRNGSILADVSTSHLVSAVGITILSILVMYSVLRQNVTSKVRYVIPSLLVVVVYF VSSYLIFIG >Mature_329_residues MVFVYFLLAAAITVYAAIKLSTYADVMTEKSKMGGMLVGTVLLAGATSLPEVTTSISAVMIDNPDIAIGNMLGSNLFNIF ILAMFDLYFRQKQLFNYASRDHLYTAGLGLLLTVTTLIALIVRVDMTFIGIGVDALLIAILYGIGIYYIGKQPKDPVAEQ EVEEEVVVGKYEDITLKRAVFGFIIAAIVIMAAGTALSITGDQIAVVTGLGSSFVGSFLIAASTSLPEAVAVFMALKLRN VNLAFGSILGSNIFNMLIIAMSDVFYRNGSILADVSTSHLVSAVGITILSILVMYSVLRQNVTSKVRYVIPSLLVVVVYF VSSYLIFIG
Specific function: Unknown
COG id: COG0530
COG function: function code P; Ca2+/Na+ antiporter
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35300; Mature: 35300
Theoretical pI: Translated: 5.26; Mature: 5.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVFVYFLLAAAITVYAAIKLSTYADVMTEKSKMGGMLVGTVLLAGATSLPEVTTSISAVM CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCHHHHCCEEEE IDNPDIAIGNMLGSNLFNIFILAMFDLYFRQKQLFNYASRDHLYTAGLGLLLTVTTLIAL ECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH IVRVDMTFIGIGVDALLIAILYGIGIYYIGKQPKDPVAEQEVEEEVVVGKYEDITLKRAV HHHHHHHHHHCCHHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHCCCCCCHHHHHHH FGFIIAAIVIMAAGTALSITGDQIAVVTGLGSSFVGSFLIAASTSLPEAVAVFMALKLRN HHHHHHHHHHHHCCCEEEECCCCEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCC VNLAFGSILGSNIFNMLIIAMSDVFYRNGSILADVSTSHLVSAVGITILSILVMYSVLRQ CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHH NVTSKVRYVIPSLLVVVVYFVSSYLIFIG HHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MVFVYFLLAAAITVYAAIKLSTYADVMTEKSKMGGMLVGTVLLAGATSLPEVTTSISAVM CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCHHHHCCEEEE IDNPDIAIGNMLGSNLFNIFILAMFDLYFRQKQLFNYASRDHLYTAGLGLLLTVTTLIAL ECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH IVRVDMTFIGIGVDALLIAILYGIGIYYIGKQPKDPVAEQEVEEEVVVGKYEDITLKRAV HHHHHHHHHHCCHHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHCCCCCCHHHHHHH FGFIIAAIVIMAAGTALSITGDQIAVVTGLGSSFVGSFLIAASTSLPEAVAVFMALKLRN HHHHHHHHHHHHCCCEEEECCCCEEEEECCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCC VNLAFGSILGSNIFNMLIIAMSDVFYRNGSILADVSTSHLVSAVGITILSILVMYSVLRQ CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHH NVTSKVRYVIPSLLVVVVYFVSSYLIFIG HHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Na (I) [Periplasm]; Ca (II) [Cytoplasm] [C]
Specific reaction: Na (I) [Periplasm] + Ca (II) [Cytoplasm] = Na (I) [Cytoplasm] + Ca (II) [Periplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA