| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
Click here to switch to the map view.
The map label for this gene is 229916063
Identifier: 229916063
GI number: 229916063
Start: 298295
End: 298987
Strand: Direct
Name: 229916063
Synonym: EAT1b_0331
Alternate gene names: NA
Gene position: 298295-298987 (Clockwise)
Preceding gene: 229916061
Following gene: 229916064
Centisome position: 9.94
GC content: 50.07
Gene sequence:
>693_bases TTGAAACGTATGATGCTGCGACTGACCGGTTTCATCATTGTGCTCGTGCTTTTGCTCGGGGCAGTCGGCTGGCTCGGTCA ACATGATAAAGTGAACAATGGATTGTATCGAACCTATTATGGAGAGAACGGTGTCCCGAACACGCATCTGGCCGTCTATC AAGACGCTGCTGACACGTATGACGTGGACTGGCGCCTACTGGCTGCCGTTCATCGGGTAGAGACCATCTTCTCGCACAGT TCTTCGATGCGTTCGTCTGTCGGTGCGATTGGACCATTTCAATTCATGCCCCGCACTTGGCTCGGTTGGGAATATGACAC CGATGACCAAAAAGGCGATGTCCCAGAAGACGAAGTAGATTTGACGGACCTTGCCTTGATTGAGCAGTATGGTGGACTCG GTCGCGACGGAAACGGCGATGGAAAAGCTGACCCACACAGTCTAGTTGATTCTGCGCACACGGCGGCGTATTATTTAAGT GAACACGGTGGGAAAAAGACAGATTCGGTCACGTCCGTCCGAAACGCCATCTTCGAATACAATCGAAGTGAGCAATATGT CAATGATGTCATGACGTACTTCGAGAACTATGAATCAAGCGTGACGTTCATGCCTGATGAGCGTGATACGCTTAGTCAAC GAGTTGCTTATTACACGATTCGATATGTCGAGTGGTTTAAATCGCTCGGCTGA
Upstream 100 bases:
>100_bases GTAAAAATCAAACGTTCGAGCATCCATATCCACTCCTGTCCTTCCTCTTAGCTATATGCTACACTATTCGGGTATTGTCT AAAAGCTAGGAGGCGGTATC
Downstream 100 bases:
>100_bases TGCTTACATGAAAAAGTGAGGAATGGAAATGAACACGCATGTAGAAGAAGTAACCATCCGCGTCAAATCAATCTTCAATG AAGATAAAACGAAACGCTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 230; Mature: 230
Protein sequence:
>230_residues MKRMMLRLTGFIIVLVLLLGAVGWLGQHDKVNNGLYRTYYGENGVPNTHLAVYQDAADTYDVDWRLLAAVHRVETIFSHS SSMRSSVGAIGPFQFMPRTWLGWEYDTDDQKGDVPEDEVDLTDLALIEQYGGLGRDGNGDGKADPHSLVDSAHTAAYYLS EHGGKKTDSVTSVRNAIFEYNRSEQYVNDVMTYFENYESSVTFMPDERDTLSQRVAYYTIRYVEWFKSLG
Sequences:
>Translated_230_residues MKRMMLRLTGFIIVLVLLLGAVGWLGQHDKVNNGLYRTYYGENGVPNTHLAVYQDAADTYDVDWRLLAAVHRVETIFSHS SSMRSSVGAIGPFQFMPRTWLGWEYDTDDQKGDVPEDEVDLTDLALIEQYGGLGRDGNGDGKADPHSLVDSAHTAAYYLS EHGGKKTDSVTSVRNAIFEYNRSEQYVNDVMTYFENYESSVTFMPDERDTLSQRVAYYTIRYVEWFKSLG >Mature_230_residues MKRMMLRLTGFIIVLVLLLGAVGWLGQHDKVNNGLYRTYYGENGVPNTHLAVYQDAADTYDVDWRLLAAVHRVETIFSHS SSMRSSVGAIGPFQFMPRTWLGWEYDTDDQKGDVPEDEVDLTDLALIEQYGGLGRDGNGDGKADPHSLVDSAHTAAYYLS EHGGKKTDSVTSVRNAIFEYNRSEQYVNDVMTYFENYESSVTFMPDERDTLSQRVAYYTIRYVEWFKSLG
Specific function: Unknown
COG id: COG0739
COG function: function code M; Membrane proteins related to metalloendopeptidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26114; Mature: 26114
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRMMLRLTGFIIVLVLLLGAVGWLGQHDKVNNGLYRTYYGENGVPNTHLAVYQDAADTY CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCEEEEEECCCCCC DVDWRLLAAVHRVETIFSHSSSMRSSVGAIGPFQFMPRTWLGWEYDTDDQKGDVPEDEVD CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCC LTDLALIEQYGGLGRDGNGDGKADPHSLVDSAHTAAYYLSEHGGKKTDSVTSVRNAIFEY HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHC NRSEQYVNDVMTYFENYESSVTFMPDERDTLSQRVAYYTIRYVEWFKSLG CCHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKRMMLRLTGFIIVLVLLLGAVGWLGQHDKVNNGLYRTYYGENGVPNTHLAVYQDAADTY CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCEEEEEECCCCCC DVDWRLLAAVHRVETIFSHSSSMRSSVGAIGPFQFMPRTWLGWEYDTDDQKGDVPEDEVD CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCC LTDLALIEQYGGLGRDGNGDGKADPHSLVDSAHTAAYYLSEHGGKKTDSVTSVRNAIFEY HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHC NRSEQYVNDVMTYFENYESSVTFMPDERDTLSQRVAYYTIRYVEWFKSLG CCHHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA