| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
Click here to switch to the map view.
The map label for this gene is 229916062
Identifier: 229916062
GI number: 229916062
Start: 297522
End: 298217
Strand: Reverse
Name: 229916062
Synonym: EAT1b_0330
Alternate gene names: NA
Gene position: 298217-297522 (Counterclockwise)
Preceding gene: 229916065
Following gene: 229916060
Centisome position: 9.94
GC content: 48.99
Gene sequence:
>696_bases ATGCTCGAACGTTTGATTTTTACAGCCATCATCGGCTACATGCTGATCGTTCAGATCTTCAATGCCAAATTGATTCGTCC CTTGATTGAAACGAGAGGACGGGCATGGGTTTACGAACAAACCGTGAAGTCGGCATGGGGACTGACCTTGTTGATTGTCG CCCTCATCTTTTTATTTCAAGTACCGCCAGCAAAAGTTGGATTGACATTCGCACCAGAAGCGGGGAACGAACAGGCTTGG CAAGTCTTTTACTTGTCATGCATCCTAGTCACCGTGACACTCGTCTTTTATCTGTTGGTCAAAACTTCAGCACGTCTCCG ACATGTGTTACGCCCTTACTATGAGCTCGATTTAGAGAAGTTGCTACTACCCCGGACAAAAGCAGAAGAACAGGCGTGGA ACGCCGTCTCGGTCACGGCTGGCGTGACCGAGGAATTCATATTCAGAGGAGTCCTGCTATACACGATTTCCCTCTATATC GAGGTGCCAGATGTGACTCTCGCCCTAATCGGGGGCGCCCTTTTCGGCGTGGCCCACGCCTATCAAGGGATAAAGGGAGT ATTTACGACAGGGATTGTTGGATTCGGATTAGGCATCCTCTATTTAGGGATGGGAGTCCTTTGGCCGGTCATGGTGTTAC ATGTACTTCTAGATTTGATTGCCGGTCCAATCCATGTCGATGCAAAAAGCGAGTGA
Upstream 100 bases:
>100_bases AGTCGCAGCATCATACGTTTCAAGATACCGCCTCCTAGCTTTTAGACAATACCCGAATAGTGTAGCATATAGCTAAGAGG AAGGACAGGAGTGGATATGG
Downstream 100 bases:
>100_bases CCGCCTCCTCATAGGCGAGAGCGTCCTTGATCATGCAATCGGTATGTTCTGCCCCATCAATTAACAACAAATCGTTCTTT CGGTTCAAGGCATTCATTTC
Product: Abortive infection protein
Products: NA
Alternate protein names: CAAX Amino Protease
Number of amino acids: Translated: 231; Mature: 231
Protein sequence:
>231_residues MLERLIFTAIIGYMLIVQIFNAKLIRPLIETRGRAWVYEQTVKSAWGLTLLIVALIFLFQVPPAKVGLTFAPEAGNEQAW QVFYLSCILVTVTLVFYLLVKTSARLRHVLRPYYELDLEKLLLPRTKAEEQAWNAVSVTAGVTEEFIFRGVLLYTISLYI EVPDVTLALIGGALFGVAHAYQGIKGVFTTGIVGFGLGILYLGMGVLWPVMVLHVLLDLIAGPIHVDAKSE
Sequences:
>Translated_231_residues MLERLIFTAIIGYMLIVQIFNAKLIRPLIETRGRAWVYEQTVKSAWGLTLLIVALIFLFQVPPAKVGLTFAPEAGNEQAW QVFYLSCILVTVTLVFYLLVKTSARLRHVLRPYYELDLEKLLLPRTKAEEQAWNAVSVTAGVTEEFIFRGVLLYTISLYI EVPDVTLALIGGALFGVAHAYQGIKGVFTTGIVGFGLGILYLGMGVLWPVMVLHVLLDLIAGPIHVDAKSE >Mature_231_residues MLERLIFTAIIGYMLIVQIFNAKLIRPLIETRGRAWVYEQTVKSAWGLTLLIVALIFLFQVPPAKVGLTFAPEAGNEQAW QVFYLSCILVTVTLVFYLLVKTSARLRHVLRPYYELDLEKLLLPRTKAEEQAWNAVSVTAGVTEEFIFRGVLLYTISLYI EVPDVTLALIGGALFGVAHAYQGIKGVFTTGIVGFGLGILYLGMGVLWPVMVLHVLLDLIAGPIHVDAKSE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25666; Mature: 25666
Theoretical pI: Translated: 7.65; Mature: 7.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLERLIFTAIIGYMLIVQIFNAKLIRPLIETRGRAWVYEQTVKSAWGLTLLIVALIFLFQ CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHC VPPAKVGLTFAPEAGNEQAWQVFYLSCILVTVTLVFYLLVKTSARLRHVLRPYYELDLEK CCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLLPRTKAEEQAWNAVSVTAGVTEEFIFRGVLLYTISLYIEVPDVTLALIGGALFGVAHA HHCCCCCHHHHHCCHHEEHHCHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHH YQGIKGVFTTGIVGFGLGILYLGMGVLWPVMVLHVLLDLIAGPIHVDAKSE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MLERLIFTAIIGYMLIVQIFNAKLIRPLIETRGRAWVYEQTVKSAWGLTLLIVALIFLFQ CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHC VPPAKVGLTFAPEAGNEQAWQVFYLSCILVTVTLVFYLLVKTSARLRHVLRPYYELDLEK CCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LLLPRTKAEEQAWNAVSVTAGVTEEFIFRGVLLYTISLYIEVPDVTLALIGGALFGVAHA HHCCCCCHHHHHCCHHEEHHCHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHH YQGIKGVFTTGIVGFGLGILYLGMGVLWPVMVLHVLLDLIAGPIHVDAKSE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA