| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229916055
Identifier: 229916055
GI number: 229916055
Start: 291397
End: 292284
Strand: Direct
Name: 229916055
Synonym: EAT1b_0323
Alternate gene names: NA
Gene position: 291397-292284 (Clockwise)
Preceding gene: 229916052
Following gene: 229916056
Centisome position: 9.71
GC content: 48.65
Gene sequence:
>888_bases ATGGCCAAACGACCGCTGACCCCTCGAGAAAGTGAGTTGATTGCGACCGCGTTATTTGTTGTCGGAAGCGTCCCATATTC AGGACATATCGACCGTCTCGAATCCCTCACCTTACGTGACATCGCTGATGACTATTTGAATGGAACTTCCACTTCGGCAG ACGCGATTGACGCACTTGATCAATACATCTACGTTCGGCGTCATCGCTTCAAAAACGTGACCCCTCATAACCTCTGGACA TTGGATGACCGGACGGAACAGGAAGCACTGCGTCATATCTCCAAGCGACCTGAATTGAAAAAGGGTCAGACGTTGAATAA ACGGAATCAACCGTTTCAAGCGGGACAAGAGATTGAATTCAAAGTGGACAAGCATGTCGACCGTGGACAATTCCGCATCT ACATCGGAAAACTTCAAGGCTACACGTGTAAAGCCCAGTCAAAAGAACGTGAAAAGATGAAGTCAGTGTCAGGATGGATC ACACATATCGACCCGAAAGACCGACTGGTTTTTGTCAACGTGACAGACTTCGGACGGATGCCAATCGAACCTGCAATGAA ACAAGAACTTGAATCGATGAGCGCCTCGATGCTCGGTTGGTTCGCCACGGCAACAATCCCTTCTGAAGAAGAAGCACTCC TTGCCAAACAGATGATTGGCACGTTACAGCGACGCGATCAACCGTATTGGTTCACGTTGACGACCGCGTTGAACCACCCT CGCCCAGAACATGTGAAACGCTGGGGAACAGTCGTGAATCTTCTCGTCAAAGCGAGTAACGGTGACCAAAAGGCCATCCA AACATTAGAGACACAAGAAGACAAATATTTTAAGGATGCGTTCATCCGCGCACTCCGTGCCCTTCATCAAGAGATGACGA AACAATAA
Upstream 100 bases:
>100_bases CTGTCCATTCCTCATTTTTTTCCAAATCGCAGTTGAGTTCACAACGGTCGAACTGTTTTTGTTATACTAATCATATGAAT TGAGAGAGAGGAAGTGCACC
Downstream 100 bases:
>100_bases AGCTGATACGACTCGAGGTGACTCCGCATGGGTCACCTCGTTTCGTGTCGAACCTATTTTGGAAAGGAACGACCGATATG CGTATACTCATCGTAGAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 295; Mature: 294
Protein sequence:
>295_residues MAKRPLTPRESELIATALFVVGSVPYSGHIDRLESLTLRDIADDYLNGTSTSADAIDALDQYIYVRRHRFKNVTPHNLWT LDDRTEQEALRHISKRPELKKGQTLNKRNQPFQAGQEIEFKVDKHVDRGQFRIYIGKLQGYTCKAQSKEREKMKSVSGWI THIDPKDRLVFVNVTDFGRMPIEPAMKQELESMSASMLGWFATATIPSEEEALLAKQMIGTLQRRDQPYWFTLTTALNHP RPEHVKRWGTVVNLLVKASNGDQKAIQTLETQEDKYFKDAFIRALRALHQEMTKQ
Sequences:
>Translated_295_residues MAKRPLTPRESELIATALFVVGSVPYSGHIDRLESLTLRDIADDYLNGTSTSADAIDALDQYIYVRRHRFKNVTPHNLWT LDDRTEQEALRHISKRPELKKGQTLNKRNQPFQAGQEIEFKVDKHVDRGQFRIYIGKLQGYTCKAQSKEREKMKSVSGWI THIDPKDRLVFVNVTDFGRMPIEPAMKQELESMSASMLGWFATATIPSEEEALLAKQMIGTLQRRDQPYWFTLTTALNHP RPEHVKRWGTVVNLLVKASNGDQKAIQTLETQEDKYFKDAFIRALRALHQEMTKQ >Mature_294_residues AKRPLTPRESELIATALFVVGSVPYSGHIDRLESLTLRDIADDYLNGTSTSADAIDALDQYIYVRRHRFKNVTPHNLWTL DDRTEQEALRHISKRPELKKGQTLNKRNQPFQAGQEIEFKVDKHVDRGQFRIYIGKLQGYTCKAQSKEREKMKSVSGWIT HIDPKDRLVFVNVTDFGRMPIEPAMKQELESMSASMLGWFATATIPSEEEALLAKQMIGTLQRRDQPYWFTLTTALNHPR PEHVKRWGTVVNLLVKASNGDQKAIQTLETQEDKYFKDAFIRALRALHQEMTKQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34012; Mature: 33881
Theoretical pI: Translated: 9.73; Mature: 9.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKRPLTPRESELIATALFVVGSVPYSGHIDRLESLTLRDIADDYLNGTSTSADAIDALD CCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH QYIYVRRHRFKNVTPHNLWTLDDRTEQEALRHISKRPELKKGQTLNKRNQPFQAGQEIEF HHHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEE KVDKHVDRGQFRIYIGKLQGYTCKAQSKEREKMKSVSGWITHIDPKDRLVFVNVTDFGRM EECCCCCCCEEEEEEEEECCEEECCCHHHHHHHHHHHCCEEEECCCCCEEEEEECCCCCC PIEPAMKQELESMSASMLGWFATATIPSEEEALLAKQMIGTLQRRDQPYWFTLTTALNHP CCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCC RPEHVKRWGTVVNLLVKASNGDQKAIQTLETQEDKYFKDAFIRALRALHQEMTKQ CHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AKRPLTPRESELIATALFVVGSVPYSGHIDRLESLTLRDIADDYLNGTSTSADAIDALD CCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH QYIYVRRHRFKNVTPHNLWTLDDRTEQEALRHISKRPELKKGQTLNKRNQPFQAGQEIEF HHHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEE KVDKHVDRGQFRIYIGKLQGYTCKAQSKEREKMKSVSGWITHIDPKDRLVFVNVTDFGRM EECCCCCCCEEEEEEEEECCEEECCCHHHHHHHHHHHCCEEEECCCCCEEEEEECCCCCC PIEPAMKQELESMSASMLGWFATATIPSEEEALLAKQMIGTLQRRDQPYWFTLTTALNHP CCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCC RPEHVKRWGTVVNLLVKASNGDQKAIQTLETQEDKYFKDAFIRALRALHQEMTKQ CHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA