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The map label for this gene is bdlA [H]

Identifier: 229916018

GI number: 229916018

Start: 253502

End: 254407

Strand: Reverse

Name: bdlA [H]

Synonym: EAT1b_0286

Alternate gene names: 229916018

Gene position: 254407-253502 (Counterclockwise)

Preceding gene: 229916019

Following gene: 229916016

Centisome position: 8.48

GC content: 47.9

Gene sequence:

>906_bases
ATGAGTACTTTGAACCAAAAAAGAATTCAATCTGCAGACGTTTTTCAATCCATTGAAACGAATATGGCGATGATTCGATT
CGATCGTCAACGCCGGGTCGTCGATGTGAACGATACGTTTGCGAAAGCAATGAAATATAGACGCGAGGAGATGATTGGCA
TGCAGCATCACTTGTTCTGCCCTTCTTCCTTTGTCAATAGTCCAGAGTATTCGGCATTTTGGGAGAAATTATGGAATGGT
TTCAGTTTCTCGGATAAAGTGGAGCGTGAGAATGCAAAAGGGGAAACCATTTGGCTCGAGGCGACGTATATGCCGATTTT
TGAAGGAGATGATGTCATCGGTGTCGTCAAGATCGCATCGGACATCACCGCACGGCAACAAGTGATTGAGGATTATGCGT
ATCGCTTTAAATCGATGACCGATGTGCTCGACGAACGGGCGAAGACAGGCATGCAAGACACGAAAGTATTGAATGAAACG
ATTGAAAAGCTTGCAAAAGATGCCGCGGACAACCTCCATGCCCTTCAGAACTTGCGTCGTCAAGCCGATGACATCGCGAA
AATTGCCTCGTCGATCAAAGAGATTGCCGCACAAACGAATCTGTTGTCCCTGAATGCTGCCATCGAAGCGGCACGAGCAG
GTGAACACGGGCTTGGATTTAATGTGGTTGCGACTGAGGTCCGCAACCTCTCCCGTATGGTTGAACGTGCGGTCATCGAC
GTCAACTCGAACACGGAAGGGATGAACGTCGAGCTTCGGAAAATTGTAGAAGGTGTCACTGCGTCCAATCAAGAGATTCA
GTTAAGTGCAAAAACGATGGAACAGACGATGGAGCGATTCCATACGTTCGAGCAGGCAGCAGCCGAGTTACATGATACGG
CCGACACGTTTACATCCAACCTGTGA

Upstream 100 bases:

>100_bases
TCTGTATAAAAAGAGAGTAATGATATGTTATGGGATACGTTACACTGAAATTCACGATTTAGTACGAACATCCTAAGAAT
AAGAAAGGTTGCTATCTATA

Downstream 100 bases:

>100_bases
ACCGATTGACCCTACACAGGGTCAGTCGGTTTTTTTGAGTCGTAACGTATGTCCGTGTCGTTTCAACCAATCTTTCGCTG
TAGCGGTATTCGGATAGATC

Product: methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor

Products: NA

Alternate protein names: Chemotaxis regulator BdlA [H]

Number of amino acids: Translated: 301; Mature: 300

Protein sequence:

>301_residues
MSTLNQKRIQSADVFQSIETNMAMIRFDRQRRVVDVNDTFAKAMKYRREEMIGMQHHLFCPSSFVNSPEYSAFWEKLWNG
FSFSDKVERENAKGETIWLEATYMPIFEGDDVIGVVKIASDITARQQVIEDYAYRFKSMTDVLDERAKTGMQDTKVLNET
IEKLAKDAADNLHALQNLRRQADDIAKIASSIKEIAAQTNLLSLNAAIEAARAGEHGLGFNVVATEVRNLSRMVERAVID
VNSNTEGMNVELRKIVEGVTASNQEIQLSAKTMEQTMERFHTFEQAAAELHDTADTFTSNL

Sequences:

>Translated_301_residues
MSTLNQKRIQSADVFQSIETNMAMIRFDRQRRVVDVNDTFAKAMKYRREEMIGMQHHLFCPSSFVNSPEYSAFWEKLWNG
FSFSDKVERENAKGETIWLEATYMPIFEGDDVIGVVKIASDITARQQVIEDYAYRFKSMTDVLDERAKTGMQDTKVLNET
IEKLAKDAADNLHALQNLRRQADDIAKIASSIKEIAAQTNLLSLNAAIEAARAGEHGLGFNVVATEVRNLSRMVERAVID
VNSNTEGMNVELRKIVEGVTASNQEIQLSAKTMEQTMERFHTFEQAAAELHDTADTFTSNL
>Mature_300_residues
STLNQKRIQSADVFQSIETNMAMIRFDRQRRVVDVNDTFAKAMKYRREEMIGMQHHLFCPSSFVNSPEYSAFWEKLWNGF
SFSDKVERENAKGETIWLEATYMPIFEGDDVIGVVKIASDITARQQVIEDYAYRFKSMTDVLDERAKTGMQDTKVLNETI
EKLAKDAADNLHALQNLRRQADDIAKIASSIKEIAAQTNLLSLNAAIEAARAGEHGLGFNVVATEVRNLSRMVERAVIDV
NSNTEGMNVELRKIVEGVTASNQEIQLSAKTMEQTMERFHTFEQAAAELHDTADTFTSNL

Specific function: Essential for biofilm dispersion by sensing environmental cues. May be involved in sensing and transducing signals within cells, resulting in the modulation of c-di-GMP levels, swimming motility and adhesiveness of the bacterial cell surface [H]

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 PAS (PER-ARNT-SIM) domains [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=121, Percent_Identity=36.3636363636364, Blast_Score=69, Evalue=5e-13,
Organism=Escherichia coli, GI1789453, Length=123, Percent_Identity=38.2113821138211, Blast_Score=69, Evalue=5e-13,
Organism=Escherichia coli, GI1788195, Length=145, Percent_Identity=35.1724137931034, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1788194, Length=59, Percent_Identity=57.6271186440678, Blast_Score=66, Evalue=3e-12,
Organism=Escherichia coli, GI1787690, Length=162, Percent_Identity=30.8641975308642, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR013656
- InterPro:   IPR013655 [H]

Pfam domain/function: PF00015 MCPsignal; PF08447 PAS_3; PF08448 PAS_4 [H]

EC number: NA

Molecular weight: Translated: 34075; Mature: 33944

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: PS50113 PAC ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTLNQKRIQSADVFQSIETNMAMIRFDRQRRVVDVNDTFAKAMKYRREEMIGMQHHLFC
CCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCEEECCHHHHHHHHHHHHHHHCCHHHCCC
PSSFVNSPEYSAFWEKLWNGFSFSDKVERENAKGETIWLEATYMPIFEGDDVIGVVKIAS
CHHHCCCCCHHHHHHHHHCCCCCCHHHHHCCCCCCEEEEEEEEEEEECCCCEEEHHHHHH
DITARQQVIEDYAYRFKSMTDVLDERAKTGMQDTKVLNETIEKLAKDAADNLHALQNLRR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QADDIAKIASSIKEIAAQTNLLSLNAAIEAARAGEHGLGFNVVATEVRNLSRMVERAVID
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHC
VNSNTEGMNVELRKIVEGVTASNQEIQLSAKTMEQTMERFHTFEQAAAELHDTADTFTSN
CCCCCCCCCHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
L
C
>Mature Secondary Structure 
STLNQKRIQSADVFQSIETNMAMIRFDRQRRVVDVNDTFAKAMKYRREEMIGMQHHLFC
CCCCHHHHHHHHHHHHHHHHHHHEEECCCCCEEECCHHHHHHHHHHHHHHHCCHHHCCC
PSSFVNSPEYSAFWEKLWNGFSFSDKVERENAKGETIWLEATYMPIFEGDDVIGVVKIAS
CHHHCCCCCHHHHHHHHHCCCCCCHHHHHCCCCCCEEEEEEEEEEEECCCCEEEHHHHHH
DITARQQVIEDYAYRFKSMTDVLDERAKTGMQDTKVLNETIEKLAKDAADNLHALQNLRR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QADDIAKIASSIKEIAAQTNLLSLNAAIEAARAGEHGLGFNVVATEVRNLSRMVERAVID
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHC
VNSNTEGMNVELRKIVEGVTASNQEIQLSAKTMEQTMERFHTFEQAAAELHDTADTFTSN
CCCCCCCCCHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
L
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]