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The map label for this gene is yjhB [H]

Identifier: 229916007

GI number: 229916007

Start: 240467

End: 241084

Strand: Reverse

Name: yjhB [H]

Synonym: EAT1b_0275

Alternate gene names: 229916007

Gene position: 241084-240467 (Counterclockwise)

Preceding gene: 229916009

Following gene: 229916006

Centisome position: 8.04

GC content: 50.65

Gene sequence:

>618_bases
ATGTCTCAATGGCTGACGTGGGCGAAACGGATTCAGGCGCTGTCTCAGGCCGGTCTGACGTTCACGCGTGATCAATATGA
CCGAGAACGGTACGAAGAGTTACAAGAAATCGTAAGAGAGATGTATGAACGGCACTCGGACTTATCGAACGAGGCCATCT
TACAACTCGTTCATGTGGACGGTTATCCGACTCCGAAACTTGATGTGCGAGGCGTCATCTTCAAAGATGACCGAATCCTG
CTCGTGAAGGAGCGGTCAGATGGGTTGTGGACCTTACCCGGCGGTTTCTGTGAAGTGAATCGCTCTACTGCCTCGAATAT
CATCAAAGAAGTAGAGGAAGAGGCTGGCCTGGATGTGATTCCAGTACGGTTGCTCGCCTTGTTCGATATGCATGAACATC
CACACCCACCTCTCTCGGAGCATTATTACAAACTTTTCATCGAGTGTGCACTGATTGGTGACGGGGAGGGGAGCGCCGGC
GTGGAGACGAGTGACGTCGGTTTCTTTGAACGAGACGATTTACCTGATCTCTCCCTTGCCCGCAATACGATCGAACAGAT
TCATATGTGCTTTGACGCACATTGGCAAGAAGAAGACTGGACCACTTTATTCGACTAG

Upstream 100 bases:

>100_bases
ACGTGATTGAAAACTGATGTCAGAGAATGTGAGTTATGAAAAGGAAGAATGCATCAATTTGCCGAAAAAGACATGTAGGA
CAAAAGATAGGGGGATCTAT

Downstream 100 bases:

>100_bases
GAGGCTCAATGATGCAAGTAAGACGATATGGACATATCCATCAACTGACCTTTTACGCTCCCGTACTGCCAATCAACGTT
CAACTGTTTGAGCATGAGCT

Product: NUDIX hydrolase

Products: AMP; D-ribose 5-phosphate

Alternate protein names: NA

Number of amino acids: Translated: 205; Mature: 204

Protein sequence:

>205_residues
MSQWLTWAKRIQALSQAGLTFTRDQYDRERYEELQEIVREMYERHSDLSNEAILQLVHVDGYPTPKLDVRGVIFKDDRIL
LVKERSDGLWTLPGGFCEVNRSTASNIIKEVEEEAGLDVIPVRLLALFDMHEHPHPPLSEHYYKLFIECALIGDGEGSAG
VETSDVGFFERDDLPDLSLARNTIEQIHMCFDAHWQEEDWTTLFD

Sequences:

>Translated_205_residues
MSQWLTWAKRIQALSQAGLTFTRDQYDRERYEELQEIVREMYERHSDLSNEAILQLVHVDGYPTPKLDVRGVIFKDDRIL
LVKERSDGLWTLPGGFCEVNRSTASNIIKEVEEEAGLDVIPVRLLALFDMHEHPHPPLSEHYYKLFIECALIGDGEGSAG
VETSDVGFFERDDLPDLSLARNTIEQIHMCFDAHWQEEDWTTLFD
>Mature_204_residues
SQWLTWAKRIQALSQAGLTFTRDQYDRERYEELQEIVREMYERHSDLSNEAILQLVHVDGYPTPKLDVRGVIFKDDRILL
VKERSDGLWTLPGGFCEVNRSTASNIIKEVEEEAGLDVIPVRLLALFDMHEHPHPPLSEHYYKLFIECALIGDGEGSAGV
ETSDVGFFERDDLPDLSLARNTIEQIHMCFDAHWQEEDWTTLFD

Specific function: Probably mediates the hydrolysis of some nucleoside diphosphate derivatives [H]

COG id: COG1051

COG function: function code F; ADP-ribose pyrophosphatase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000086
- InterPro:   IPR015797 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: 3.6.1.13

Molecular weight: Translated: 23740; Mature: 23609

Theoretical pI: Translated: 4.34; Mature: 4.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQWLTWAKRIQALSQAGLTFTRDQYDRERYEELQEIVREMYERHSDLSNEAILQLVHVD
CCHHHHHHHHHHHHHHCCCEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHEEEEECC
GYPTPKLDVRGVIFKDDRILLVKERSDGLWTLPGGFCEVNRSTASNIIKEVEEEAGLDVI
CCCCCCCCEEEEEEECCEEEEEEECCCCEEECCCCCEECCHHHHHHHHHHHHHHCCCCHH
PVRLLALFDMHEHPHPPLSEHYYKLFIECALIGDGEGSAGVETSDVGFFERDDLPDLSLA
HHHHHHHHHHHCCCCCCHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHH
RNTIEQIHMCFDAHWQEEDWTTLFD
HHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
SQWLTWAKRIQALSQAGLTFTRDQYDRERYEELQEIVREMYERHSDLSNEAILQLVHVD
CHHHHHHHHHHHHHHCCCEECHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHEEEEECC
GYPTPKLDVRGVIFKDDRILLVKERSDGLWTLPGGFCEVNRSTASNIIKEVEEEAGLDVI
CCCCCCCCEEEEEEECCEEEEEEECCCCEEECCCCCEECCHHHHHHHHHHHHHHCCCCHH
PVRLLALFDMHEHPHPPLSEHYYKLFIECALIGDGEGSAGVETSDVGFFERDDLPDLSLA
HHHHHHHHHHHCCCCCCHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHH
RNTIEQIHMCFDAHWQEEDWTTLFD
HHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ADPribose; H2O

Specific reaction: ADP-ribose + H2O = AMP + D-ribose 5-phosphate

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9579062; 9384377 [H]