| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229915999
Identifier: 229915999
GI number: 229915999
Start: 233821
End: 234798
Strand: Reverse
Name: 229915999
Synonym: EAT1b_0267
Alternate gene names: NA
Gene position: 234798-233821 (Counterclockwise)
Preceding gene: 229916000
Following gene: 229915997
Centisome position: 7.83
GC content: 51.53
Gene sequence:
>978_bases ATGAGATGGTTGTGGTGGGTATTCGCATCCTTTTACATCGGACATGTGTTTCCGTTGCTCTTCTTATTGACACTTCGTCT CCCTCGGAACACACAACTGATTGTACAGACAATCATGAGCGTCGGTGCCCTCTATTTCTCTTATGAAATGAGCATCTTGC TTTTGATTTTCACATACGTTCATGCGTTCATTCGAACGTTGGATTGGACGGACCGTTATGCGATGGCGAGCGTATTGTTT TTGGTGGCAGACTGGTTATTCCCACCGGCATCGCAACCGCTCGCGATGGTGCTCTTCCCGTTCATCTTTTTGATTTGGCA ACGAAACCTGTATTACCGTCGCGACTACAAGCGGATGGTGACGATGTTGACCGTCGGCTTAGGCATCGGACTGACTGTCT CCCTCGTCATTCGTACAATCAAAGAGCTGTTGTTTGGCAATGTCGTCGCCTGGATCACTCCGTTCTTTCTGTGGATCGGG AGCTGGTTCGATGGCATCGTGCTTGACCCGAACGATCGCGTGAACCGGTTCCTCGTTCCGGACAACCCGAACCTCGATGC GGAGACGGTGGCACAGGAGACGTTACTCGAGTCGGCATCGAACAACTCGTTGTTCTACATCGGAGTGTTCGCGATGATCT TGCTGCTTGGGGTAGGATTGTTCTTCTACTTGCAGAAGCGAAAAGACATCCAGGAAGACGGGATGATTCCGAGGAGTATT CACCATCCGACACTTTCAGATAAGCGGATTGTCCGCTCGCCTCGCCAGATTCGCCTCCTTGAGACGGGACGGAAGTTGGA ACAGCAGCACCCGCGTCTTCGAGAGGAGACGGTAGCTGATTGGCTTCAGCGAATCGAGTTCACGGACCACAGGCTCTATG CAGATTGGTTAGAGGCCGCAGAGTATGGAGACAAGGAAGCGCCACAAGCAATCAGCGATTCCTTCGAACGACTCGTCGAG CAAGTGAAAAAACGCTAA
Upstream 100 bases:
>100_bases TGTCCGAGAGTGATTTTCCACTCGCTCGCTCCTTGTTTGAGCGAAAGGTCGCCAAATATAGTGGGAATCAATCGATTCTC CGCTTGGGAGGTGACGGTCA
Downstream 100 bases:
>100_bases AAAACATCCGGCAGAGGAGATTCTTCTGACCGGATGTTTTTCATTATAAAATCGGACTGAGGAGGCGGGACACACTCTCC TTGAAGCGAATCCAACGTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 325; Mature: 325
Protein sequence:
>325_residues MRWLWWVFASFYIGHVFPLLFLLTLRLPRNTQLIVQTIMSVGALYFSYEMSILLLIFTYVHAFIRTLDWTDRYAMASVLF LVADWLFPPASQPLAMVLFPFIFLIWQRNLYYRRDYKRMVTMLTVGLGIGLTVSLVIRTIKELLFGNVVAWITPFFLWIG SWFDGIVLDPNDRVNRFLVPDNPNLDAETVAQETLLESASNNSLFYIGVFAMILLLGVGLFFYLQKRKDIQEDGMIPRSI HHPTLSDKRIVRSPRQIRLLETGRKLEQQHPRLREETVADWLQRIEFTDHRLYADWLEAAEYGDKEAPQAISDSFERLVE QVKKR
Sequences:
>Translated_325_residues MRWLWWVFASFYIGHVFPLLFLLTLRLPRNTQLIVQTIMSVGALYFSYEMSILLLIFTYVHAFIRTLDWTDRYAMASVLF LVADWLFPPASQPLAMVLFPFIFLIWQRNLYYRRDYKRMVTMLTVGLGIGLTVSLVIRTIKELLFGNVVAWITPFFLWIG SWFDGIVLDPNDRVNRFLVPDNPNLDAETVAQETLLESASNNSLFYIGVFAMILLLGVGLFFYLQKRKDIQEDGMIPRSI HHPTLSDKRIVRSPRQIRLLETGRKLEQQHPRLREETVADWLQRIEFTDHRLYADWLEAAEYGDKEAPQAISDSFERLVE QVKKR >Mature_325_residues MRWLWWVFASFYIGHVFPLLFLLTLRLPRNTQLIVQTIMSVGALYFSYEMSILLLIFTYVHAFIRTLDWTDRYAMASVLF LVADWLFPPASQPLAMVLFPFIFLIWQRNLYYRRDYKRMVTMLTVGLGIGLTVSLVIRTIKELLFGNVVAWITPFFLWIG SWFDGIVLDPNDRVNRFLVPDNPNLDAETVAQETLLESASNNSLFYIGVFAMILLLGVGLFFYLQKRKDIQEDGMIPRSI HHPTLSDKRIVRSPRQIRLLETGRKLEQQHPRLREETVADWLQRIEFTDHRLYADWLEAAEYGDKEAPQAISDSFERLVE QVKKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38205; Mature: 38205
Theoretical pI: Translated: 8.67; Mature: 8.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRWLWWVFASFYIGHVFPLLFLLTLRLPRNTQLIVQTIMSVGALYFSYEMSILLLIFTYV CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HAFIRTLDWTDRYAMASVLFLVADWLFPPASQPLAMVLFPFIFLIWQRNLYYRRDYKRMV HHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHH TMLTVGLGIGLTVSLVIRTIKELLFGNVVAWITPFFLWIGSWFDGIVLDPNDRVNRFLVP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCEEECC DNPNLDAETVAQETLLESASNNSLFYIGVFAMILLLGVGLFFYLQKRKDIQEDGMIPRSI CCCCCCHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCC HHPTLSDKRIVRSPRQIRLLETGRKLEQQHPRLREETVADWLQRIEFTDHRLYADWLEAA CCCCCCCHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH EYGDKEAPQAISDSFERLVEQVKKR HCCCCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRWLWWVFASFYIGHVFPLLFLLTLRLPRNTQLIVQTIMSVGALYFSYEMSILLLIFTYV CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HAFIRTLDWTDRYAMASVLFLVADWLFPPASQPLAMVLFPFIFLIWQRNLYYRRDYKRMV HHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHH TMLTVGLGIGLTVSLVIRTIKELLFGNVVAWITPFFLWIGSWFDGIVLDPNDRVNRFLVP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCEEECC DNPNLDAETVAQETLLESASNNSLFYIGVFAMILLLGVGLFFYLQKRKDIQEDGMIPRSI CCCCCCHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCC HHPTLSDKRIVRSPRQIRLLETGRKLEQQHPRLREETVADWLQRIEFTDHRLYADWLEAA CCCCCCCHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH EYGDKEAPQAISDSFERLVEQVKKR HCCCCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA