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The map label for this gene is 229915953

Identifier: 229915953

GI number: 229915953

Start: 192803

End: 193264

Strand: Reverse

Name: 229915953

Synonym: EAT1b_0221

Alternate gene names: NA

Gene position: 193264-192803 (Counterclockwise)

Preceding gene: 229915954

Following gene: 229915952

Centisome position: 6.44

GC content: 43.51

Gene sequence:

>462_bases
ATGCAAAAATCCGAATTTATTGAACAAGTTTCTCGAAAAATGAAATTGATTCGTATCGAATCTCAGTATTCACAGGAAGA
GATGGCGAACTTACTCGGTATTTCAAAAAAAACGCTCATCCAAATCGAGAAGGAGCGGAATGAAGCGAGTTGGTCGACGA
TTGTGACGCTATGCGCCTTGTTTAACGAAAGTGAGATTCTCATACACTTGATTGGTGACGACCCCGTCGAATTCGTCAAA
CTGATTGCGACCGAGAACACTTATGAGCCGAAAGAAAAAACACTCGGCGGACGCGTCTTTTGGCATGCAATCGAGTCAGG
TCCACATTACACCCTTCAACAAAATATCATCAGCGGACATTATCGGATCATCGATCTCAATCATGTGAGGTGGTACAGCA
CATTTGATGCAGAGGATGCCGAACAGGTACGATTGAAGTTAGAACATCAGCGAGAGGTGTAA

Upstream 100 bases:

>100_bases
GTCTGCCTGCTCTTATTTATCGTGTTTCTCGGAATCTCGTGGATTTTGATTTTCATAAGCTCAGCGACGCTGTAAGTCAG
ACAAACAAGAAGGAGCACTT

Downstream 100 bases:

>100_bases
GATGACGAAGAAGCGTAAAGATTTGATGATAGCTTTAACCCTCATCATCTTCACAATCGCCTATTTTTGGCTGATTCCGA
ATCTCATGATTGGTTACATT

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: Helix-Turn-Helix Domain-Containing Protein; Transcriptional Regulator XRE Family; Transcriptional Regulator; HTH Domain Protein; Helix-Turn-Helix Domain Protein

Number of amino acids: Translated: 153; Mature: 153

Protein sequence:

>153_residues
MQKSEFIEQVSRKMKLIRIESQYSQEEMANLLGISKKTLIQIEKERNEASWSTIVTLCALFNESEILIHLIGDDPVEFVK
LIATENTYEPKEKTLGGRVFWHAIESGPHYTLQQNIISGHYRIIDLNHVRWYSTFDAEDAEQVRLKLEHQREV

Sequences:

>Translated_153_residues
MQKSEFIEQVSRKMKLIRIESQYSQEEMANLLGISKKTLIQIEKERNEASWSTIVTLCALFNESEILIHLIGDDPVEFVK
LIATENTYEPKEKTLGGRVFWHAIESGPHYTLQQNIISGHYRIIDLNHVRWYSTFDAEDAEQVRLKLEHQREV
>Mature_153_residues
MQKSEFIEQVSRKMKLIRIESQYSQEEMANLLGISKKTLIQIEKERNEASWSTIVTLCALFNESEILIHLIGDDPVEFVK
LIATENTYEPKEKTLGGRVFWHAIESGPHYTLQQNIISGHYRIIDLNHVRWYSTFDAEDAEQVRLKLEHQREV

Specific function: Unknown

COG id: COG1476

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17932; Mature: 17932

Theoretical pI: Translated: 5.61; Mature: 5.61

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKSEFIEQVSRKMKLIRIESQYSQEEMANLLGISKKTLIQIEKERNEASWSTIVTLCAL
CCHHHHHHHHHHHHHEEEECCCCCHHHHHHHHCCCHHHHEEEEHHCCCCHHHHHHHHHHH
FNESEILIHLIGDDPVEFVKLIATENTYEPKEKTLGGRVFWHAIESGPHYTLQQNIISGH
CCCCEEEEEEECCCHHHHHHHHHCCCCCCCHHHCCCCEEEEEEECCCCCEEEHHHHCCCC
YRIIDLNHVRWYSTFDAEDAEQVRLKLEHQREV
EEEEEECCEEEEECCCCCCHHHHHHHHHHCCCC
>Mature Secondary Structure
MQKSEFIEQVSRKMKLIRIESQYSQEEMANLLGISKKTLIQIEKERNEASWSTIVTLCAL
CCHHHHHHHHHHHHHEEEECCCCCHHHHHHHHCCCHHHHEEEEHHCCCCHHHHHHHHHHH
FNESEILIHLIGDDPVEFVKLIATENTYEPKEKTLGGRVFWHAIESGPHYTLQQNIISGH
CCCCEEEEEEECCCHHHHHHHHHCCCCCCCHHHCCCCEEEEEEECCCCCEEEHHHHCCCC
YRIIDLNHVRWYSTFDAEDAEQVRLKLEHQREV
EEEEEECCEEEEECCCCCCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA