Definition Exiguobacterium sp. AT1b, complete genome.
Accession NC_012673
Length 2,999,895

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The map label for this gene is yfiS [H]

Identifier: 229915947

GI number: 229915947

Start: 186656

End: 187879

Strand: Reverse

Name: yfiS [H]

Synonym: EAT1b_0215

Alternate gene names: 229915947

Gene position: 187879-186656 (Counterclockwise)

Preceding gene: 229915949

Following gene: 229915944

Centisome position: 6.26

GC content: 46.98

Gene sequence:

>1224_bases
TTGAATTCGTTTCGAAAAACCTCTGCGCTACTGCTCGTCAGTGTCGGAATCTCAAACCTTGGTGCCTGGATATACTTCAT
TGCGCTCAACTTGATTATCCTAGAGATGACTGGATCCCCTTTCGCCGTCTCGATTCTGTATGTATTAGTCCCGCTCGCCT
CGCTCGTCTCGAATCTTTGGTCAGGTAGCCTGATTGACCGGGTCGATACGAGACGACTGATGATGTTACTGGATGGTCTG
CGTGCGTTCCTCGTATTCAGCTTAGGCTGGATTGATTCACTGTGGCTCATCTACGGGATTGTCTTTCTTCTCAATGTGAT
GAGCTCGTTATTCGAATCATCGAGTCTGGTCTACATGACGCAACTCGTACCTGCCTCGAACCGACAAAAGTTCAATGCGA
TGAAAAACTTTGTACAGTCATCCGGGTTTATTTTAGGTCCGACGATTGCGGGTCTACTCTTTCTAGTCGGGAGCCCGACA
TTTGCGATTTTTGTGAACGCCTTCGCACTCATTGGATCGGTCGGTATGCTGATGCTCCTCCCATCTCACCTTCGAACGAA
TGCGCCTGTTGAACCATTCTCTATGCGGATGATCATTGACGATTGGAAGGTTGTCATCCGATTCGCTTCGAATGGCAGAT
ATGTGATGCTCATTTATGGATTGTTCTGTGTCATGACCATCTTCATGTCTGGACTCGATTCGTTGGAGGCGTCATTCGCG
ACCCAAGTCCTTCACTTGTCTGAAAGCCGATATGGCTTTCTCGTCAGTATCGCTGGGATTGGGATTATCTTTGGATCACT
CATCAATTCAAGATGGAGTCACCGCTTGTCCTTATCGTTTTGTATTGGATTCGGGGCGATCATGACACCAGTCGGCTATC
TTCTTTTCGCAAGTTCATCGTCATTCATGATGGCCTCGGTTGGATTTTTTGTCCTGACATTCGCGCTTGCCTTTGCAAAT
ACAGGATTCTTATCATTCTATCAACACCATGTCCCGGTCGAAATCATGGGTAGGTTCTCTGGCGCTATCAATGTGGCAGA
GTCGCTACTCGTCATCCTACTCACATTTGGGATTGGACTTCTTGCCGACATGGTTGGGATTCGTCCAGTCTATCTCGCAT
TCTCGATTATCTTCTTCCTTGTTGGTTGTTACACCATACATGTCATGCGCGACCGTTCGAAACGGGAGTATTTCTCTCAC
AATCAAATCAAAGAAGTTTCTTAA

Upstream 100 bases:

>100_bases
GGGTGGCACCACGATGAGAATCTCGTCCCCAAGAATTCGTTCTTGGGGGTGGGATTTTTTTGCGTTCCGAAAGTGATCAA
AAATAGAAGGAGTGATTGAC

Downstream 100 bases:

>100_bases
GTCATGAGCCGGTCGTTTATATGCGACCGGCTTGTTCGATTCGATGAATCGCTTCGATGATTGTGTCTGGTCGTTGTAAA
TGAATTTGGTGTCCTGCCTT

Product: major facilitator superfamily MFS_1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 407; Mature: 407

Protein sequence:

>407_residues
MNSFRKTSALLLVSVGISNLGAWIYFIALNLIILEMTGSPFAVSILYVLVPLASLVSNLWSGSLIDRVDTRRLMMLLDGL
RAFLVFSLGWIDSLWLIYGIVFLLNVMSSLFESSSLVYMTQLVPASNRQKFNAMKNFVQSSGFILGPTIAGLLFLVGSPT
FAIFVNAFALIGSVGMLMLLPSHLRTNAPVEPFSMRMIIDDWKVVIRFASNGRYVMLIYGLFCVMTIFMSGLDSLEASFA
TQVLHLSESRYGFLVSIAGIGIIFGSLINSRWSHRLSLSFCIGFGAIMTPVGYLLFASSSSFMMASVGFFVLTFALAFAN
TGFLSFYQHHVPVEIMGRFSGAINVAESLLVILLTFGIGLLADMVGIRPVYLAFSIIFFLVGCYTIHVMRDRSKREYFSH
NQIKEVS

Sequences:

>Translated_407_residues
MNSFRKTSALLLVSVGISNLGAWIYFIALNLIILEMTGSPFAVSILYVLVPLASLVSNLWSGSLIDRVDTRRLMMLLDGL
RAFLVFSLGWIDSLWLIYGIVFLLNVMSSLFESSSLVYMTQLVPASNRQKFNAMKNFVQSSGFILGPTIAGLLFLVGSPT
FAIFVNAFALIGSVGMLMLLPSHLRTNAPVEPFSMRMIIDDWKVVIRFASNGRYVMLIYGLFCVMTIFMSGLDSLEASFA
TQVLHLSESRYGFLVSIAGIGIIFGSLINSRWSHRLSLSFCIGFGAIMTPVGYLLFASSSSFMMASVGFFVLTFALAFAN
TGFLSFYQHHVPVEIMGRFSGAINVAESLLVILLTFGIGLLADMVGIRPVYLAFSIIFFLVGCYTIHVMRDRSKREYFSH
NQIKEVS
>Mature_407_residues
MNSFRKTSALLLVSVGISNLGAWIYFIALNLIILEMTGSPFAVSILYVLVPLASLVSNLWSGSLIDRVDTRRLMMLLDGL
RAFLVFSLGWIDSLWLIYGIVFLLNVMSSLFESSSLVYMTQLVPASNRQKFNAMKNFVQSSGFILGPTIAGLLFLVGSPT
FAIFVNAFALIGSVGMLMLLPSHLRTNAPVEPFSMRMIIDDWKVVIRFASNGRYVMLIYGLFCVMTIFMSGLDSLEASFA
TQVLHLSESRYGFLVSIAGIGIIFGSLINSRWSHRLSLSFCIGFGAIMTPVGYLLFASSSSFMMASVGFFVLTFALAFAN
TGFLSFYQHHVPVEIMGRFSGAINVAESLLVILLTFGIGLLADMVGIRPVYLAFSIIFFLVGCYTIHVMRDRSKREYFSH
NQIKEVS

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. TCR/tet family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 45036; Mature: 45036

Theoretical pI: Translated: 9.44; Mature: 9.44

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSFRKTSALLLVSVGISNLGAWIYFIALNLIILEMTGSPFAVSILYVLVPLASLVSNLW
CCCHHHHHHHHHEECCHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHH
SGSLIDRVDTRRLMMLLDGLRAFLVFSLGWIDSLWLIYGIVFLLNVMSSLFESSSLVYMT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
QLVPASNRQKFNAMKNFVQSSGFILGPTIAGLLFLVGSPTFAIFVNAFALIGSVGMLMLL
ECCCCCCHHHHHHHHHHHHHCCCEECHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
PSHLRTNAPVEPFSMRMIIDDWKVVIRFASNGRYVMLIYGLFCVMTIFMSGLDSLEASFA
HHHHCCCCCCCCHHHHHHHHHHHHHHEECCCCCEEHHHHHHHHHHHHHHHCHHHHHHHHH
TQVLHLSESRYGFLVSIAGIGIIFGSLINSRWSHRLSLSFCIGFGAIMTPVGYLLFASSS
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
SFMMASVGFFVLTFALAFANTGFLSFYQHHVPVEIMGRFSGAINVAESLLVILLTFGIGL
CHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LADMVGIRPVYLAFSIIFFLVGCYTIHVMRDRSKREYFSHNQIKEVS
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCC
>Mature Secondary Structure
MNSFRKTSALLLVSVGISNLGAWIYFIALNLIILEMTGSPFAVSILYVLVPLASLVSNLW
CCCHHHHHHHHHEECCHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHH
SGSLIDRVDTRRLMMLLDGLRAFLVFSLGWIDSLWLIYGIVFLLNVMSSLFESSSLVYMT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
QLVPASNRQKFNAMKNFVQSSGFILGPTIAGLLFLVGSPTFAIFVNAFALIGSVGMLMLL
ECCCCCCHHHHHHHHHHHHHCCCEECHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
PSHLRTNAPVEPFSMRMIIDDWKVVIRFASNGRYVMLIYGLFCVMTIFMSGLDSLEASFA
HHHHCCCCCCCCHHHHHHHHHHHHHHEECCCCCEEHHHHHHHHHHHHHHHCHHHHHHHHH
TQVLHLSESRYGFLVSIAGIGIIFGSLINSRWSHRLSLSFCIGFGAIMTPVGYLLFASSS
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
SFMMASVGFFVLTFALAFANTGFLSFYQHHVPVEIMGRFSGAINVAESLLVILLTFGIGL
CHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LADMVGIRPVYLAFSIIFFLVGCYTIHVMRDRSKREYFSHNQIKEVS
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8946165; 9384377 [H]