| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is ypiP [H]
Identifier: 229915917
GI number: 229915917
Start: 162082
End: 162873
Strand: Reverse
Name: ypiP [H]
Synonym: EAT1b_0185
Alternate gene names: 229915917
Gene position: 162873-162082 (Counterclockwise)
Preceding gene: 229915918
Following gene: 229915916
Centisome position: 5.43
GC content: 46.09
Gene sequence:
>792_bases ATGTATATTGTAACCACTTGTTTACGTCCGACAGATGATGTCTTATCTCGAGCACATTCGCATGCCGCAGCGTACAAGAT AACATTTGTCGACCGGCGCAAACTTTCCATCGACGAGTTGAAGAAACGTCATCAACGAGATGTACTTGTATTTGATAAAC GACGTGTCGAATTCACACCTCTGCATAGTAAAGAACCGTTCTTTTTCCACCCATCGAGCTCCGTCTTTCGGGTGAAGCAA CTGAGCCGAGGCGGAACAGACCCACTCATTGACGCCATGCAAGCAACTCCAGGTGATCATATTCTAGATTGTACACTCGG ACTCGGCTCGGACAGTATCGTCATGAGCCATGTCGCCGGTTCAAACGGTAAAGTTATCGGCCTTGAGAGTCAGTTCATTA CGGCACAACTCGTCCGAGAAGGCATGTCCGTGTGGGTCGAAAAAGATGAGCAGGTCAATGAGGCGATGCGACGCATTGAG GTCGTTCACTCCAACTCTCTCGACTATTTAAAAACGTGTGCGGATAATTCGTTTGATTGTATCTACTTTGATCCGATGTT TGAAAAGACGATTTCAGAATCGGTTCATCTGAACCCACTTCGCACAATCGCCGACACTTCCCCTCTCACGCAAGAATTGA TTACCGAAGCAACACGAGTAGCCAAGAAACGAATTGTCTTGAAGGCGCATTTTGAGAGCGATACCTTTGAACGGTACGGT TTCACTCACATAAAACGTAAAACGTCGAAGTTCCATTATGGATATATCGACCTTGAGTCTAAGTCTATTTAG
Upstream 100 bases:
>100_bases CTCGCTTCTCATAAAGCACTCATCGATGAATTATCAGACTTACTCAGCAAGAAAAAATGAGACGCACCTGCGTCTCATTT TTTATGAAGGAGCCCGAATC
Downstream 100 bases:
>100_bases TCAAATTGAACTAAATAGGTCTTTAGACTCCTTTTTTGTTTATTATTTTCTGAATATTGACATTAATCAGACACAAAGAG TACATTTACAACAAGCTCAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 263; Mature: 263
Protein sequence:
>263_residues MYIVTTCLRPTDDVLSRAHSHAAAYKITFVDRRKLSIDELKKRHQRDVLVFDKRRVEFTPLHSKEPFFFHPSSSVFRVKQ LSRGGTDPLIDAMQATPGDHILDCTLGLGSDSIVMSHVAGSNGKVIGLESQFITAQLVREGMSVWVEKDEQVNEAMRRIE VVHSNSLDYLKTCADNSFDCIYFDPMFEKTISESVHLNPLRTIADTSPLTQELITEATRVAKKRIVLKAHFESDTFERYG FTHIKRKTSKFHYGYIDLESKSI
Sequences:
>Translated_263_residues MYIVTTCLRPTDDVLSRAHSHAAAYKITFVDRRKLSIDELKKRHQRDVLVFDKRRVEFTPLHSKEPFFFHPSSSVFRVKQ LSRGGTDPLIDAMQATPGDHILDCTLGLGSDSIVMSHVAGSNGKVIGLESQFITAQLVREGMSVWVEKDEQVNEAMRRIE VVHSNSLDYLKTCADNSFDCIYFDPMFEKTISESVHLNPLRTIADTSPLTQELITEATRVAKKRIVLKAHFESDTFERYG FTHIKRKTSKFHYGYIDLESKSI >Mature_263_residues MYIVTTCLRPTDDVLSRAHSHAAAYKITFVDRRKLSIDELKKRHQRDVLVFDKRRVEFTPLHSKEPFFFHPSSSVFRVKQ LSRGGTDPLIDAMQATPGDHILDCTLGLGSDSIVMSHVAGSNGKVIGLESQFITAQLVREGMSVWVEKDEQVNEAMRRIE VVHSNSLDYLKTCADNSFDCIYFDPMFEKTISESVHLNPLRTIADTSPLTQELITEATRVAKKRIVLKAHFESDTFERYG FTHIKRKTSKFHYGYIDLESKSI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004154 - InterPro: IPR007536 [H]
Pfam domain/function: PF04445 DUF548 [H]
EC number: NA
Molecular weight: Translated: 30029; Mature: 30029
Theoretical pI: Translated: 8.04; Mature: 8.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYIVTTCLRPTDDVLSRAHSHAAAYKITFVDRRKLSIDELKKRHQRDVLVFDKRRVEFTP CEEEEEECCCCHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHHHCCCEEEEECCCEEEEE LHSKEPFFFHPSSSVFRVKQLSRGGTDPLIDAMQATPGDHILDCTLGLGSDSIVMSHVAG CCCCCCEEECCCCCHHHHHHHHCCCCCHHHHHHHCCCCCCEEEEEECCCCCCEEEEEECC SNGKVIGLESQFITAQLVREGMSVWVEKDEQVNEAMRRIEVVHSNSLDYLKTCADNSFDC CCCCEEEECHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCE IYFDPMFEKTISESVHLNPLRTIADTSPLTQELITEATRVAKKRIVLKAHFESDTFERYG EEECHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHEEEEEECCCCCHHHHC FTHIKRKTSKFHYGYIDLESKSI HHHHHHHCCCEEEEEEEECCCCC >Mature Secondary Structure MYIVTTCLRPTDDVLSRAHSHAAAYKITFVDRRKLSIDELKKRHQRDVLVFDKRRVEFTP CEEEEEECCCCHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHHHCCCEEEEECCCEEEEE LHSKEPFFFHPSSSVFRVKQLSRGGTDPLIDAMQATPGDHILDCTLGLGSDSIVMSHVAG CCCCCCEEECCCCCHHHHHHHHCCCCCHHHHHHHCCCCCCEEEEEECCCCCCEEEEEECC SNGKVIGLESQFITAQLVREGMSVWVEKDEQVNEAMRRIEVVHSNSLDYLKTCADNSFDC CCCCEEEECHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCE IYFDPMFEKTISESVHLNPLRTIADTSPLTQELITEATRVAKKRIVLKAHFESDTFERYG EEECHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHEEEEEECCCCCHHHHC FTHIKRKTSKFHYGYIDLESKSI HHHHHHHCCCEEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]