| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
Click here to switch to the map view.
The map label for this gene is ina [H]
Identifier: 229915916
GI number: 229915916
Start: 159550
End: 161943
Strand: Reverse
Name: ina [H]
Synonym: EAT1b_0184
Alternate gene names: 229915916
Gene position: 161943-159550 (Counterclockwise)
Preceding gene: 229915917
Following gene: 229915915
Centisome position: 5.4
GC content: 48.79
Gene sequence:
>2394_bases ATGAAAAAACGTTCCATCCGTCGAACGACACTCGCGGCTCTCATGACATCTGCCATGACAGTCAGTATCGTTCCGGCAGC TGGTGCTGCACCCCTCTCGGTTGCACCATCGGTTCCGACAACGAGCGAGCTCGCTCCATTCGACCACAACATCATCGATG AAGAGCGTCTCGCGAAAGCTCTCGAGAAACGTGGCGTCATCAAAAAAGGATTGTCCGCATCTGAACGCATGAAAGCAGTC GATGCGTATATCGCGAAAAAACAAGGTGAAGCGAAAGATCCACATAAGCACGACGACAAAGTGAACGAGAAGGCTTCGAA AGCAAAAGAGAAGATACATACTCAATTCGAAAAGGAATCAAAACGAATTCTTGATAAAGCGAAAAAAGGGCAAGGAAATT ACCGTAAAGGGAAACCGAACGGTCAAGTAAAAGTATCTCCTGCCCAGCAATCTGCATACAATGGTTCGGTACGTGAAGAT AAAGTCCTCGTTCTCCTCGTCGAGTACAGCGACTTCAAACACAATAACATCATCCAAGAGCCGGGCTATATGTACAGCGA TAACTTCAGTAAAGAACATTACGAAAAGTATATGTTCGGTGATCAACAATTTGAACTCTTTAACGGTGAAAAGGTTCAAA CGTTCAAACAATACTATGAAGAACAATCAGGCGGAAGTTATACGGTCGATGGTGAGGTTTCGGAGTGGTTGACCGTTCCG GGAACCGCGAAAGACTATGGAGCTGACAAAGGTGATGGCGGACATGATAACGTCGGACCAGGACCACGTCAACTCGTCAA AGATGCGTTGAATGCTGCGGTCGCATCTGGAATCGATTTGAAAGAACATGATCAATACGACCTTTACGATTTGGATGGAG ACGGTGACTTCAATGAGCCGGACGGTCTCGTTGACCACTTGATGATCATCCACGCTGGGACTGGTCAAGAAGCGGGTGGC GGTGCGCTCGGTGACGATGCGGTATGGTCACATCGCTGGGTTCTTAACGGTGTTTATCCAGTAGCCAACACAGAAGCTGC AGTTCCTTACTGGGGTGGGAAAATGGCTGCATATGATTACACGATTCAACCTGAAGATGGTGCGGTCGGCGTTTTCGCAC ACGAGTTCGGACATGACCTCGGTCTTCCAGATGAGTACGATACGCAGTACACAGGTCAAGGTGAGCCGGTACAATCATGG TCGATCATGAGTGGCGGTAGCTGGGCTGGTAAAGTCGCTGGTACGGAGCCAACAAGCTTCTCACCACAAAACAAAGAATA CTTCCAAAAAATCATGGGTGGAAACTGGGCAAACATCACAGAAGTCGACCTTGAAGACATCAACTCCCAAGGGTTCGTCG CACAACTCGACCAATCTGTGACGAAATCAAACAACCCAGGCATCGTCAAAGTCAACCTTCCTGATAAGAAGATTAAAGGA ATCGAACCAGCTTATGGCGATCGCTACTATTACTCGACAAAAGGTGACGACATCCATACTGAGATGGCAACACCAGCTGT GAAACTCGGTGCGGACGGAGTCCTCGCATTCGATTCATTCTATGAAGTCGAATCGGACTATGATTACTTGTACATCAAAG CCCTCAGTGGTGGTCAAGAAGTCGTTCTCGATGTATTCGGTGACGACGTCAACGGCGCAAACGAAGCAGGCTACCCTGCT GAGACGACGAACGGTGCATGGGTCAACAAATCATACGACCTCTCACAATTCGCTGGACAAGATGTTCAAATCGTCTTTGA ATACGTGACAGACGGCGGTGTCGCTATGAAAGGCTTCGCAGTCGACAACTTGTCAATCAAATCAGAATCAGCAACACTCT TCGCAGATGATGCGGAAGGCGCTGAAGCCGTGACGCTCGATGGATTCGTCTCTTCAGACGGATACGATTCAAAACCACAC TATTACTACCTTGAGTGGCGTAACCACGCCGGGTCGGATATGGGTCTTCTCAACGGCCGCGGCGTGAAATATAACACTGG TCTTGTCGTTTGGTATGGTGATGACTCGTTCACAGACAACTGGGTCGGTGTCCACCCTGGTGAAGGCTTCCTCGGTGTCG TCGATTCACATCCTGAAGCGCTCATCGGTAACTTGAACGGTCAACAGACAGTCGCAGGTAGTACACGTTACCAAATTGCT GATGCGGCGTTCAGTCTCGATAAGACGCTCGCTTGGTATATCGATTCACCGAGTCGTGGCGTGTACGATTACAAAGCACA GCCTGGCGTGAAGCAGTTCAATGATGCAAACTCTTACATCAACTCGCTTATTCCAGATGCAGGACGCAAACTTCCGCAAT ACGGTCTCGTCATTGACGTAGTCGGTGAAGCGAAAGACAACTCTGCAGGTGCCGTTTGGATCCGTACAAAATAA
Upstream 100 bases:
>100_bases TTTATTATTTTCTGAATATTGACATTAATCAGACACAAAGAGTACATTTACAACAAGCTCACACATTTTCCCATTATTTT TTAACAGGAGGTTCACACAA
Downstream 100 bases:
>100_bases TGATGTAGCATTCGACCTCCAGTCTTCCTTTATCGAAGATTGGAGGTCTTATTATTCTAAAAAAGCTTGAAAACGACGAA TAATCTGTGTAACATAGTTG
Product: M6 family metalloprotease domain protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 797; Mature: 797
Protein sequence:
>797_residues MKKRSIRRTTLAALMTSAMTVSIVPAAGAAPLSVAPSVPTTSELAPFDHNIIDEERLAKALEKRGVIKKGLSASERMKAV DAYIAKKQGEAKDPHKHDDKVNEKASKAKEKIHTQFEKESKRILDKAKKGQGNYRKGKPNGQVKVSPAQQSAYNGSVRED KVLVLLVEYSDFKHNNIIQEPGYMYSDNFSKEHYEKYMFGDQQFELFNGEKVQTFKQYYEEQSGGSYTVDGEVSEWLTVP GTAKDYGADKGDGGHDNVGPGPRQLVKDALNAAVASGIDLKEHDQYDLYDLDGDGDFNEPDGLVDHLMIIHAGTGQEAGG GALGDDAVWSHRWVLNGVYPVANTEAAVPYWGGKMAAYDYTIQPEDGAVGVFAHEFGHDLGLPDEYDTQYTGQGEPVQSW SIMSGGSWAGKVAGTEPTSFSPQNKEYFQKIMGGNWANITEVDLEDINSQGFVAQLDQSVTKSNNPGIVKVNLPDKKIKG IEPAYGDRYYYSTKGDDIHTEMATPAVKLGADGVLAFDSFYEVESDYDYLYIKALSGGQEVVLDVFGDDVNGANEAGYPA ETTNGAWVNKSYDLSQFAGQDVQIVFEYVTDGGVAMKGFAVDNLSIKSESATLFADDAEGAEAVTLDGFVSSDGYDSKPH YYYLEWRNHAGSDMGLLNGRGVKYNTGLVVWYGDDSFTDNWVGVHPGEGFLGVVDSHPEALIGNLNGQQTVAGSTRYQIA DAAFSLDKTLAWYIDSPSRGVYDYKAQPGVKQFNDANSYINSLIPDAGRKLPQYGLVIDVVGEAKDNSAGAVWIRTK
Sequences:
>Translated_797_residues MKKRSIRRTTLAALMTSAMTVSIVPAAGAAPLSVAPSVPTTSELAPFDHNIIDEERLAKALEKRGVIKKGLSASERMKAV DAYIAKKQGEAKDPHKHDDKVNEKASKAKEKIHTQFEKESKRILDKAKKGQGNYRKGKPNGQVKVSPAQQSAYNGSVRED KVLVLLVEYSDFKHNNIIQEPGYMYSDNFSKEHYEKYMFGDQQFELFNGEKVQTFKQYYEEQSGGSYTVDGEVSEWLTVP GTAKDYGADKGDGGHDNVGPGPRQLVKDALNAAVASGIDLKEHDQYDLYDLDGDGDFNEPDGLVDHLMIIHAGTGQEAGG GALGDDAVWSHRWVLNGVYPVANTEAAVPYWGGKMAAYDYTIQPEDGAVGVFAHEFGHDLGLPDEYDTQYTGQGEPVQSW SIMSGGSWAGKVAGTEPTSFSPQNKEYFQKIMGGNWANITEVDLEDINSQGFVAQLDQSVTKSNNPGIVKVNLPDKKIKG IEPAYGDRYYYSTKGDDIHTEMATPAVKLGADGVLAFDSFYEVESDYDYLYIKALSGGQEVVLDVFGDDVNGANEAGYPA ETTNGAWVNKSYDLSQFAGQDVQIVFEYVTDGGVAMKGFAVDNLSIKSESATLFADDAEGAEAVTLDGFVSSDGYDSKPH YYYLEWRNHAGSDMGLLNGRGVKYNTGLVVWYGDDSFTDNWVGVHPGEGFLGVVDSHPEALIGNLNGQQTVAGSTRYQIA DAAFSLDKTLAWYIDSPSRGVYDYKAQPGVKQFNDANSYINSLIPDAGRKLPQYGLVIDVVGEAKDNSAGAVWIRTK >Mature_797_residues MKKRSIRRTTLAALMTSAMTVSIVPAAGAAPLSVAPSVPTTSELAPFDHNIIDEERLAKALEKRGVIKKGLSASERMKAV DAYIAKKQGEAKDPHKHDDKVNEKASKAKEKIHTQFEKESKRILDKAKKGQGNYRKGKPNGQVKVSPAQQSAYNGSVRED KVLVLLVEYSDFKHNNIIQEPGYMYSDNFSKEHYEKYMFGDQQFELFNGEKVQTFKQYYEEQSGGSYTVDGEVSEWLTVP GTAKDYGADKGDGGHDNVGPGPRQLVKDALNAAVASGIDLKEHDQYDLYDLDGDGDFNEPDGLVDHLMIIHAGTGQEAGG GALGDDAVWSHRWVLNGVYPVANTEAAVPYWGGKMAAYDYTIQPEDGAVGVFAHEFGHDLGLPDEYDTQYTGQGEPVQSW SIMSGGSWAGKVAGTEPTSFSPQNKEYFQKIMGGNWANITEVDLEDINSQGFVAQLDQSVTKSNNPGIVKVNLPDKKIKG IEPAYGDRYYYSTKGDDIHTEMATPAVKLGADGVLAFDSFYEVESDYDYLYIKALSGGQEVVLDVFGDDVNGANEAGYPA ETTNGAWVNKSYDLSQFAGQDVQIVFEYVTDGGVAMKGFAVDNLSIKSESATLFADDAEGAEAVTLDGFVSSDGYDSKPH YYYLEWRNHAGSDMGLLNGRGVKYNTGLVVWYGDDSFTDNWVGVHPGEGFLGVVDSHPEALIGNLNGQQTVAGSTRYQIA DAAFSLDKTLAWYIDSPSRGVYDYKAQPGVKQFNDANSYINSLIPDAGRKLPQYGLVIDVVGEAKDNSAGAVWIRTK
Specific function: Neutral metalloprotease that is secreted to degrade antibacterial proteins produced by the insect host for its defense (attacins and cecropins). Probably degrades some unknown crucial protein(s) too, since it is toxic when injected to insect larvae [H]
COG id: COG4412
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M6 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012300 - InterPro: IPR008757 [H]
Pfam domain/function: PF05547 Peptidase_M6 [H]
EC number: NA
Molecular weight: Translated: 86906; Mature: 86906
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKRSIRRTTLAALMTSAMTVSIVPAAGAAPLSVAPSVPTTSELAPFDHNIIDEERLAKA CCCCHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH LEKRGVIKKGLSASERMKAVDAYIAKKQGEAKDPHKHDDKVNEKASKAKEKIHTQFEKES HHHCCHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH KRILDKAKKGQGNYRKGKPNGQVKVSPAQQSAYNGSVREDKVLVLLVEYSDFKHNNIIQE HHHHHHHHCCCCCCCCCCCCCCEEECCCHHHCCCCCCCCCEEEEEEEECCCCCCCCCCCC PGYMYSDNFSKEHYEKYMFGDQQFELFNGEKVQTFKQYYEEQSGGSYTVDGEVSEWLTVP CCCEECCCCCHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHCCCCCEEECCCCHHEEECC GTAKDYGADKGDGGHDNVGPGPRQLVKDALNAAVASGIDLKEHDQYDLYDLDGDGDFNEP CCCHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCC DGLVDHLMIIHAGTGQEAGGGALGDDAVWSHRWVLNGVYPVANTEAAVPYWGGKMAAYDY CHHHEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEECEEECCCCCCCCCCCCCEEEEEEE TIQPEDGAVGVFAHEFGHDLGLPDEYDTQYTGQGEPVQSWSIMSGGSWAGKVAGTEPTSF EECCCCCEEEEEEHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCC SPQNKEYFQKIMGGNWANITEVDLEDINSQGFVAQLDQSVTKSNNPGIVKVNLPDKKIKG CCCCHHHHHHHHCCCCCCEEEEHHHHCCCCCHHHHHHHHHHCCCCCCEEEEECCCHHHCC IEPAYGDRYYYSTKGDDIHTEMATPAVKLGADGVLAFDSFYEVESDYDYLYIKALSGGQE CCCCCCCEEEEECCCCCEEHHHCCCEEEECCCCEEEEHHHHCCCCCCCEEEEEEECCCCE VVLDVFGDDVNGANEAGYPAETTNGAWVNKSYDLSQFAGQDVQIVFEYVTDGGVAMKGFA EEEEEECCCCCCCCCCCCCCCCCCCCEECCCCCHHHHCCCCEEEEEEECCCCCEEEEEEE VDNLSIKSESATLFADDAEGAEAVTLDGFVSSDGYDSKPHYYYLEWRNHAGSDMGLLNGR ECCEEEECCCCEEEECCCCCCCEEEECCEECCCCCCCCCCEEEEEECCCCCCCCEEECCC GVKYNTGLVVWYGDDSFTDNWVGVHPGEGFLGVVDSHPEALIGNLNGQQTVAGSTRYQIA CEEEECCEEEEECCCCCCCCEEEECCCCCEEEEECCCCCCEEECCCCCEEECCCCEEEEH DAAFSLDKTLAWYIDSPSRGVYDYKAQPGVKQFNDANSYINSLIPDAGRKLPQYGLVIDV HHHHHCCCEEEEEEECCCCCEEEECCCCCCHHHHHHHHHHHHHCCHHHCCCCCCCEEEEE VGEAKDNSAGAVWIRTK ECCCCCCCCCEEEEEEC >Mature Secondary Structure MKKRSIRRTTLAALMTSAMTVSIVPAAGAAPLSVAPSVPTTSELAPFDHNIIDEERLAKA CCCCHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH LEKRGVIKKGLSASERMKAVDAYIAKKQGEAKDPHKHDDKVNEKASKAKEKIHTQFEKES HHHCCHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH KRILDKAKKGQGNYRKGKPNGQVKVSPAQQSAYNGSVREDKVLVLLVEYSDFKHNNIIQE HHHHHHHHCCCCCCCCCCCCCCEEECCCHHHCCCCCCCCCEEEEEEEECCCCCCCCCCCC PGYMYSDNFSKEHYEKYMFGDQQFELFNGEKVQTFKQYYEEQSGGSYTVDGEVSEWLTVP CCCEECCCCCHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHCCCCCEEECCCCHHEEECC GTAKDYGADKGDGGHDNVGPGPRQLVKDALNAAVASGIDLKEHDQYDLYDLDGDGDFNEP CCCHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCC DGLVDHLMIIHAGTGQEAGGGALGDDAVWSHRWVLNGVYPVANTEAAVPYWGGKMAAYDY CHHHEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEECEEECCCCCCCCCCCCCEEEEEEE TIQPEDGAVGVFAHEFGHDLGLPDEYDTQYTGQGEPVQSWSIMSGGSWAGKVAGTEPTSF EECCCCCEEEEEEHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCC SPQNKEYFQKIMGGNWANITEVDLEDINSQGFVAQLDQSVTKSNNPGIVKVNLPDKKIKG CCCCHHHHHHHHCCCCCCEEEEHHHHCCCCCHHHHHHHHHHCCCCCCEEEEECCCHHHCC IEPAYGDRYYYSTKGDDIHTEMATPAVKLGADGVLAFDSFYEVESDYDYLYIKALSGGQE CCCCCCCEEEEECCCCCEEHHHCCCEEEECCCCEEEEHHHHCCCCCCCEEEEEEECCCCE VVLDVFGDDVNGANEAGYPAETTNGAWVNKSYDLSQFAGQDVQIVFEYVTDGGVAMKGFA EEEEEECCCCCCCCCCCCCCCCCCCCEECCCCCHHHHCCCCEEEEEEECCCCCEEEEEEE VDNLSIKSESATLFADDAEGAEAVTLDGFVSSDGYDSKPHYYYLEWRNHAGSDMGLLNGR ECCEEEECCCCEEEECCCCCCCEEEECCEECCCCCCCCCCEEEEEECCCCCCCCEEECCC GVKYNTGLVVWYGDDSFTDNWVGVHPGEGFLGVVDSHPEALIGNLNGQQTVAGSTRYQIA CEEEECCEEEEECCCCCCCCEEEECCCCCEEEEECCCCCCEEECCCCCEEECCCCEEEEH DAAFSLDKTLAWYIDSPSRGVYDYKAQPGVKQFNDANSYINSLIPDAGRKLPQYGLVIDV HHHHHCCCEEEEEEECCCCCEEEECCCCCCHHHHHHHHHHHHHCCHHHCCCCCCCEEEEE VGEAKDNSAGAVWIRTK ECCCCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2089225; 6421577 [H]