Definition Exiguobacterium sp. AT1b, complete genome.
Accession NC_012673
Length 2,999,895

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The map label for this gene is 229915908

Identifier: 229915908

GI number: 229915908

Start: 152307

End: 153341

Strand: Reverse

Name: 229915908

Synonym: EAT1b_0176

Alternate gene names: NA

Gene position: 153341-152307 (Counterclockwise)

Preceding gene: 229915911

Following gene: 229915904

Centisome position: 5.11

GC content: 53.24

Gene sequence:

>1035_bases
ATGGTCATTATTCAAGGAATCGCACTTTTACTGCTCATCCTCGCCTTGTTCACGCTGTTTAGTTATAAGGCGCCATTCGG
AATGAAGGCAATGGGCGCCCTTGCTGGAGCGGCCATCGCGAGTTTCCTCGTCGAAGCGTTTAATGCGTATGCCATCGGCG
GATTGCTACCACTCCCTCTTTATGAAGAAGTCGGTCAGGCGGCAGGCGCCTTGTCGGGTCCTGCCGCTGCGGCACTCGTC
GCCATCGCACTCGGGATCAACCCCGTCTATAGTTTGATGATCGGGTTGTCCGTATCAGGATTCGGAATCCTTCCTGGATT
TTTCGCCGGTTACATCTTGGCTTTAGCCGGCACTCGAATCAATCGCTATCTGCCGACCGGCGTCGATATGATTTTCTACG
TCATCGTGATGGCACCGCTCGCCCGTCTCGTCGCGACCGGGGTAGACCCACTCGTGACAAATACACTTGAACAAATCGGA
GCTGTCATCGAACTCGCAGCAACTCAAAATCCGGTCGTCATGGGTCTCGTCTTAGGAGGGATCGTCACGGTCGTATCGAC
ATCACCTCTCAGTTCGATGGCCTTGACGGCGATGCTCGGTTTGACCGGGGTCCCGATGGCGATTGCCGCGCTCGCGTTGA
CCGCGTCCATCTCAATGAATTACTTGTTGTTCCGTCAATTGAAAATCGGCACAAAGAAAGATCAGCTCTCTGTCGCCATC
GAACCGTTGACGCAAGCTGACCTCATTTCTGCTAACCCGATTCCGATTTACAGTGTCAACTTTGTCGGTGGAGCCATCGC
CGGATTGATTGTCGCCATGACCGGTATGATCAACGATGCGCCGGGTTCGGCAGCCGGGATTCCGGGACTTCTAGTCATGT
ATGGTTTCAACGATTGGCAAACGGTCACCTTCACAGCCGTCGTGCTGTTCATCCTTGGGATCGGTTTCGGCTTGATTGGA
AGTCGTTTGTTCAAAAATTTCCCGATTGTCCGTCATACGGAAAAAGTCGAATCGACAGAAGAAGATGCGGCCTAA

Upstream 100 bases:

>100_bases
AATTTTGATTTTTCTTCTGAAAATGGCTTTACAGAAGTCTTTCTATGCACGAATATAGAATAAATTATGAATAAATAGAG
ATAGAAAGAAGGAAGAGTTT

Downstream 100 bases:

>100_bases
TCAAAAAATCGATGCACGCTCGAACGAATTGTTCAGCGGCATCGATTTTTTATTATGACTCGTATGATTGTTCTTACAAT
AGAAAAGTGTCGACACGTTC

Product: membrane protein; regulatory protein

Products: NA

Alternate protein names: Regulatory Protein; Regulatory Protein PfoR; Transcriptional Regulator; Perfringolysin O Regulatory Protein; Transcriptional Regulator PfoR

Number of amino acids: Translated: 344; Mature: 344

Protein sequence:

>344_residues
MVIIQGIALLLLILALFTLFSYKAPFGMKAMGALAGAAIASFLVEAFNAYAIGGLLPLPLYEEVGQAAGALSGPAAAALV
AIALGINPVYSLMIGLSVSGFGILPGFFAGYILALAGTRINRYLPTGVDMIFYVIVMAPLARLVATGVDPLVTNTLEQIG
AVIELAATQNPVVMGLVLGGIVTVVSTSPLSSMALTAMLGLTGVPMAIAALALTASISMNYLLFRQLKIGTKKDQLSVAI
EPLTQADLISANPIPIYSVNFVGGAIAGLIVAMTGMINDAPGSAAGIPGLLVMYGFNDWQTVTFTAVVLFILGIGFGLIG
SRLFKNFPIVRHTEKVESTEEDAA

Sequences:

>Translated_344_residues
MVIIQGIALLLLILALFTLFSYKAPFGMKAMGALAGAAIASFLVEAFNAYAIGGLLPLPLYEEVGQAAGALSGPAAAALV
AIALGINPVYSLMIGLSVSGFGILPGFFAGYILALAGTRINRYLPTGVDMIFYVIVMAPLARLVATGVDPLVTNTLEQIG
AVIELAATQNPVVMGLVLGGIVTVVSTSPLSSMALTAMLGLTGVPMAIAALALTASISMNYLLFRQLKIGTKKDQLSVAI
EPLTQADLISANPIPIYSVNFVGGAIAGLIVAMTGMINDAPGSAAGIPGLLVMYGFNDWQTVTFTAVVLFILGIGFGLIG
SRLFKNFPIVRHTEKVESTEEDAA
>Mature_344_residues
MVIIQGIALLLLILALFTLFSYKAPFGMKAMGALAGAAIASFLVEAFNAYAIGGLLPLPLYEEVGQAAGALSGPAAAALV
AIALGINPVYSLMIGLSVSGFGILPGFFAGYILALAGTRINRYLPTGVDMIFYVIVMAPLARLVATGVDPLVTNTLEQIG
AVIELAATQNPVVMGLVLGGIVTVVSTSPLSSMALTAMLGLTGVPMAIAALALTASISMNYLLFRQLKIGTKKDQLSVAI
EPLTQADLISANPIPIYSVNFVGGAIAGLIVAMTGMINDAPGSAAGIPGLLVMYGFNDWQTVTFTAVVLFILGIGFGLIG
SRLFKNFPIVRHTEKVESTEEDAA

Specific function: Unknown

COG id: COG1299

COG function: function code G; Phosphotransferase system, fructose-specific IIC component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35482; Mature: 35482

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVIIQGIALLLLILALFTLFSYKAPFGMKAMGALAGAAIASFLVEAFNAYAIGGLLPLPL
CEEHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
YEEVGQAAGALSGPAAAALVAIALGINPVYSLMIGLSVSGFGILPGFFAGYILALAGTRI
HHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
NRYLPTGVDMIFYVIVMAPLARLVATGVDPLVTNTLEQIGAVIELAATQNPVVMGLVLGG
HHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
IVTVVSTSPLSSMALTAMLGLTGVPMAIAALALTASISMNYLLFRQLKIGTKKDQLSVAI
HHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHEEEE
EPLTQADLISANPIPIYSVNFVGGAIAGLIVAMTGMINDAPGSAAGIPGLLVMYGFNDWQ
CCCCHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCH
TVTFTAVVLFILGIGFGLIGSRLFKNFPIVRHTEKVESTEEDAA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCC
>Mature Secondary Structure
MVIIQGIALLLLILALFTLFSYKAPFGMKAMGALAGAAIASFLVEAFNAYAIGGLLPLPL
CEEHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
YEEVGQAAGALSGPAAAALVAIALGINPVYSLMIGLSVSGFGILPGFFAGYILALAGTRI
HHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
NRYLPTGVDMIFYVIVMAPLARLVATGVDPLVTNTLEQIGAVIELAATQNPVVMGLVLGG
HHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
IVTVVSTSPLSSMALTAMLGLTGVPMAIAALALTASISMNYLLFRQLKIGTKKDQLSVAI
HHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHEEEE
EPLTQADLISANPIPIYSVNFVGGAIAGLIVAMTGMINDAPGSAAGIPGLLVMYGFNDWQ
CCCCHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCH
TVTFTAVVLFILGIGFGLIGSRLFKNFPIVRHTEKVESTEEDAA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA