| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is ywnE [H]
Identifier: 229915904
GI number: 229915904
Start: 148537
End: 149982
Strand: Reverse
Name: ywnE [H]
Synonym: EAT1b_0172
Alternate gene names: 229915904
Gene position: 149982-148537 (Counterclockwise)
Preceding gene: 229915908
Following gene: 229915901
Centisome position: 5.0
GC content: 48.34
Gene sequence:
>1446_bases ATGATTTTCAGTTGGGGACTTTATATCGTCCTCGGGTTAAACATGTTGTTCGCACTCGCCGTCATCTTCGCCGAAAGACG TGACGTCGGCGCGACCTGGGCCTGGCTTCTTGTCCTGTTTTTCTTACCAGTGCTCGGCTTTATCGTCTATCTCTTCCTAG GGCGACAACTTAAAAAGGATAACTTCTATAATTTAAGTGTAGAAGAACGTTCCTTCCATTCGCTTCAAGTCGAAGCGCAA CTTGAACAAATTCATACGCGCCAAACCCAGCTCGCGCAGCCGCTGTTTGAAAAGTATGACCAACTGCTTCAAATGAACTT ACGATCTTCTAAATCGTTGATCAGTGTACATAACCGTTCCCTCATCTTGCACGACGGCGAACAAAAGTTTAAAGCGTTGA TGGATGACATTCGCTCGGCCGAGACGGAGATCAATATTCAATATTACATCATCCAGCGTGACGCTCTCGGTCAGGCACTG TTGAAAGAGTTGATCGAGCGTGCGAAAGCCGGCGTCAAAGTTCGACTCCTTTACGATGCGGTCGGCTCACGTAGTCTTCG GAACTCGGACTTTAAAGAGTTGATTGCGAACGATGGCGAGGTGCGCGTCTTCTTCCCACCGACACTCGGGATCATCAACT TCAAGTTGAACAACCGAAATCACCGAAAGGTCGTCATCATCGATGGGAAAATCGGCTATGTCGGTGGATTCAATGTCGGT ACCGAGTATTTAGGTTTAGTCGAAAAATTTGGCTATTGGCGTGACACGCACCTGCGTGTCGAAGGAGATGTCGTTTACAA TTTACAACACCGATTCATATTGGACTGGAATTATTCTGGTCACCGTAAACATGATCCTGAAAATGCCTTCTGCTTTGCGC GACATGACATTAAAGAAAATTCTCCGATGCAAATCGTCACGAGTGGACCAAACTCGGATACGGAACATTTGAAGAATATG ATGATCAAGATGATCATGTCCGCCAAACGACGGGTCGTCATTCAAACGCCATACTTCATTCCAGATACAAGCTTTATGGA CGCTTGCAAAATGGCACTCCATTCTGGCGTTCAGATGGATATCATGATCCCTGGAAAACCGGACCATCCATTCGTCATGT GGGCGTCCCTCTCGTTCCTTGGGGAACTCCTCGACTACGGGGCAAACGTCTATCTGTATGATGAAGGGTTTCTCCACGCG AAGACGCTCGTCGTCGATGATGAGATCGCGACCGTCGGGACGACAAATTTGGACGCTCGAAGCTTCCGTCTCAATTTTGA AGTGAACGCACTCATCTATGATGAGAGGGTCGCCCTCGAACTCGTTTCGTTATTCGAGACCGACACTGCGGTCAGTCGCA CCTATACAGTGGAAGACTATGAATCCCGTAAATGGACGGTGCGCGCCCGTGAAGGGGTGTCACGCCTTCTTAGTCCGATC CTGTGA
Upstream 100 bases:
>100_bases CTTCTCCCCCTATTTCATTTGATAGCATCCTATTCCCTCATTTGATGTATGATTAAGCTATGAATCGATTATAAAGGGGT GTATGTCGTTGGATTGGTCT
Downstream 100 bases:
>100_bases ACTACTCACCACTTATTTGCTTCGCAAATGGAAGGGGGAGCTTCTTGGGAAGACCGTGCTCTCACTAGCCACGGTTATGG ACCAAGCTCGTCGGGCAGTC
Product: phospholipase D/transphosphatidylase
Products: NA
Alternate protein names: CL synthase 2 [H]
Number of amino acids: Translated: 481; Mature: 481
Protein sequence:
>481_residues MIFSWGLYIVLGLNMLFALAVIFAERRDVGATWAWLLVLFFLPVLGFIVYLFLGRQLKKDNFYNLSVEERSFHSLQVEAQ LEQIHTRQTQLAQPLFEKYDQLLQMNLRSSKSLISVHNRSLILHDGEQKFKALMDDIRSAETEINIQYYIIQRDALGQAL LKELIERAKAGVKVRLLYDAVGSRSLRNSDFKELIANDGEVRVFFPPTLGIINFKLNNRNHRKVVIIDGKIGYVGGFNVG TEYLGLVEKFGYWRDTHLRVEGDVVYNLQHRFILDWNYSGHRKHDPENAFCFARHDIKENSPMQIVTSGPNSDTEHLKNM MIKMIMSAKRRVVIQTPYFIPDTSFMDACKMALHSGVQMDIMIPGKPDHPFVMWASLSFLGELLDYGANVYLYDEGFLHA KTLVVDDEIATVGTTNLDARSFRLNFEVNALIYDERVALELVSLFETDTAVSRTYTVEDYESRKWTVRAREGVSRLLSPI L
Sequences:
>Translated_481_residues MIFSWGLYIVLGLNMLFALAVIFAERRDVGATWAWLLVLFFLPVLGFIVYLFLGRQLKKDNFYNLSVEERSFHSLQVEAQ LEQIHTRQTQLAQPLFEKYDQLLQMNLRSSKSLISVHNRSLILHDGEQKFKALMDDIRSAETEINIQYYIIQRDALGQAL LKELIERAKAGVKVRLLYDAVGSRSLRNSDFKELIANDGEVRVFFPPTLGIINFKLNNRNHRKVVIIDGKIGYVGGFNVG TEYLGLVEKFGYWRDTHLRVEGDVVYNLQHRFILDWNYSGHRKHDPENAFCFARHDIKENSPMQIVTSGPNSDTEHLKNM MIKMIMSAKRRVVIQTPYFIPDTSFMDACKMALHSGVQMDIMIPGKPDHPFVMWASLSFLGELLDYGANVYLYDEGFLHA KTLVVDDEIATVGTTNLDARSFRLNFEVNALIYDERVALELVSLFETDTAVSRTYTVEDYESRKWTVRAREGVSRLLSPI L >Mature_481_residues MIFSWGLYIVLGLNMLFALAVIFAERRDVGATWAWLLVLFFLPVLGFIVYLFLGRQLKKDNFYNLSVEERSFHSLQVEAQ LEQIHTRQTQLAQPLFEKYDQLLQMNLRSSKSLISVHNRSLILHDGEQKFKALMDDIRSAETEINIQYYIIQRDALGQAL LKELIERAKAGVKVRLLYDAVGSRSLRNSDFKELIANDGEVRVFFPPTLGIINFKLNNRNHRKVVIIDGKIGYVGGFNVG TEYLGLVEKFGYWRDTHLRVEGDVVYNLQHRFILDWNYSGHRKHDPENAFCFARHDIKENSPMQIVTSGPNSDTEHLKNM MIKMIMSAKRRVVIQTPYFIPDTSFMDACKMALHSGVQMDIMIPGKPDHPFVMWASLSFLGELLDYGANVYLYDEGFLHA KTLVVDDEIATVGTTNLDARSFRLNFEVNALIYDERVALELVSLFETDTAVSRTYTVEDYESRKWTVRAREGVSRLLSPI L
Specific function: Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol [H]
COG id: COG1502
COG function: function code I; Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 PLD phosphodiesterase domains [H]
Homologues:
Organism=Escherichia coli, GI1787502, Length=483, Percent_Identity=27.1221532091097, Blast_Score=186, Evalue=3e-48, Organism=Escherichia coli, GI1787007, Length=324, Percent_Identity=29.6296296296296, Blast_Score=137, Evalue=2e-33, Organism=Escherichia coli, GI87081826, Length=371, Percent_Identity=25.8760107816712, Blast_Score=75, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022924 - InterPro: IPR015679 - InterPro: IPR001736 [H]
Pfam domain/function: PF00614 PLDc [H]
EC number: 2.7.8.-
Molecular weight: Translated: 55401; Mature: 55401
Theoretical pI: Translated: 6.90; Mature: 6.90
Prosite motif: PS50035 PLD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIFSWGLYIVLGLNMLFALAVIFAERRDVGATWAWLLVLFFLPVLGFIVYLFLGRQLKKD CEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC NFYNLSVEERSFHSLQVEAQLEQIHTRQTQLAQPLFEKYDQLLQMNLRSSKSLISVHNRS CCEEEEECCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCE LILHDGEQKFKALMDDIRSAETEINIQYYIIQRDALGQALLKELIERAKAGVKVRLLYDA EEEECCHHHHHHHHHHHHCCCCEEEEEEEEEECHHHHHHHHHHHHHHHHCCEEEEEEEEC VGSRSLRNSDFKELIANDGEVRVFFPPTLGIINFKLNNRNHRKVVIIDGKIGYVGGFNVG CCCCCCCCCHHHHHHCCCCCEEEEECCCEEEEEEEECCCCCCEEEEEECCEEEEECCCCC TEYLGLVEKFGYWRDTHLRVEGDVVYNLQHRFILDWNYSGHRKHDPENAFCFARHDIKEN HHHHHHHHHHCCCCCCEEEEECCEEEEEEEEEEEEECCCCCCCCCCCCCEEEEECCCCCC SPMQIVTSGPNSDTEHLKNMMIKMIMSAKRRVVIQTPYFIPDTSFMDACKMALHSGVQMD CCEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEECCEECCCCHHHHHHHHHHHCCCEEE IMIPGKPDHPFVMWASLSFLGELLDYGANVYLYDEGFLHAKTLVVDDEIATVGTTNLDAR EEECCCCCCCEEEEHHHHHHHHHHHCCCCEEEEECCCEEEEEEEEECCEEEECCCCCCCE SFRLNFEVNALIYDERVALELVSLFETDTAVSRTYTVEDYESRKWTVRAREGVSRLLSPI EEEEEEEEEEEEECCHHHHHHHHHHHCCCHHCEEEEECCCCCCEEEEEHHHHHHHHHHHC L C >Mature Secondary Structure MIFSWGLYIVLGLNMLFALAVIFAERRDVGATWAWLLVLFFLPVLGFIVYLFLGRQLKKD CEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC NFYNLSVEERSFHSLQVEAQLEQIHTRQTQLAQPLFEKYDQLLQMNLRSSKSLISVHNRS CCEEEEECCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCE LILHDGEQKFKALMDDIRSAETEINIQYYIIQRDALGQALLKELIERAKAGVKVRLLYDA EEEECCHHHHHHHHHHHHCCCCEEEEEEEEEECHHHHHHHHHHHHHHHHCCEEEEEEEEC VGSRSLRNSDFKELIANDGEVRVFFPPTLGIINFKLNNRNHRKVVIIDGKIGYVGGFNVG CCCCCCCCCHHHHHHCCCCCEEEEECCCEEEEEEEECCCCCCEEEEEECCEEEEECCCCC TEYLGLVEKFGYWRDTHLRVEGDVVYNLQHRFILDWNYSGHRKHDPENAFCFARHDIKEN HHHHHHHHHHCCCCCCEEEEECCEEEEEEEEEEEEECCCCCCCCCCCCCEEEEECCCCCC SPMQIVTSGPNSDTEHLKNMMIKMIMSAKRRVVIQTPYFIPDTSFMDACKMALHSGVQMD CCEEEEECCCCCHHHHHHHHHHHHHHHCCCEEEEECCEECCCCHHHHHHHHHHHCCCEEE IMIPGKPDHPFVMWASLSFLGELLDYGANVYLYDEGFLHAKTLVVDDEIATVGTTNLDAR EEECCCCCCCEEEEHHHHHHHHHHHCCCCEEEEECCCEEEEEEEEECCEEEECCCCCCCE SFRLNFEVNALIYDERVALELVSLFETDTAVSRTYTVEDYESRKWTVRAREGVSRLLSPI EEEEEEEEEEEEECCHHHHHHHHHHHCCCHHCEEEEECCCCCCEEEEEHHHHHHHHHHHC L C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferring phosphorus-containing groups [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9150240; 9384377 [H]