| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is bcp [C]
Identifier: 229915901
GI number: 229915901
Start: 144234
End: 144869
Strand: Reverse
Name: bcp [C]
Synonym: EAT1b_0169
Alternate gene names: 229915901
Gene position: 144869-144234 (Counterclockwise)
Preceding gene: 229915904
Following gene: 229915900
Centisome position: 4.83
GC content: 44.34
Gene sequence:
>636_bases ATGAATTCATTATTGGAAGAAATCAAATCGTATAAAGATCAGTTTAAACAAAAGGCACCTGCCGAGAAGCAACGATTGAT GGCTCAGGCGACTCAAGAATTGAAAGATTCAGGAATCGCATCAGGGTTAACAGTTGGAGATCAAGCGCCGTCGTTTGAAT TGCCTCACGCGGACGGGACAACCGTCAATTTGAAAACGCTCCTTGAAAATGGACCAGTCATCGTCACATTTTACCGAGGT GGATGGTGCCCATACTGTAACCTCGAGCTCCGCGCTTACCAGCGCGAGTTGGCAACGATTCAAGAAAAAGGCGCGACTCT TGTCGCGATCAGTCCGGAAACGCCGGATTATTCCCTTTCGACGAAAGAAAAGAATGAACTTGATTTTTATGTATTGAGTG ATGTTGATAATATTGTCGCACGTCAATTCGACCTCGTCTTTGACATACCAGATTACTTGATTGATATTTATAAAGCATCT GGACTAAATGTCGATGCACATAACGGGAACGAGGATTGGCAGTTGCCGAAACCGGCCACGTTCATCATCCAATCTGATGG AACGATTTCGTTCAGTGATGTGCCTGCTGACTATACAGAACGTGTCGACCCGAAAACGGTTATTGAAAAATTGTAA
Upstream 100 bases:
>100_bases AATTTGAAATGGAGTTTCACCGTTGTGTTTGATTGAACAAATCAAACTATTCGTATTTACCAATAAATTGAGTTACCATA TCGGAAAAGGGGGTCAAAGC
Downstream 100 bases:
>100_bases AAAAAGGAGATGACACGCGTCATCTCAGCTTGTTGACAAATAACATGTTCGAACTCGTCCTTCCGGCGCCCACGCTTTCC GCAGGCAATCCCGGAGCCGC
Product: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen
Products: Acceptor; H2O; oxidized thioredoxin [C]
Alternate protein names: Peroxiredoxin; Redoxin; AhpC/Tsa Family Protein; Peroxiredoxin-Like Protein; Redoxin Superfamily; Antioxidant AhpC/TSA Family; AhpC-TSA; Peroxiredoxin/AhpC/Tsa Family Protein; AhpC/Tsa Family Protein Selenocysteine-Containing; Bacterioferritin Comigratory Protein; Alkyl Hydroperoxide Reductase/Thiol Specific Antioxidant; Peroxiredoxin Family Protein; Peroxiredoxin Thioredoxin-Like Fold Protein; Redoxin Domain Protein; Alkyl Hydroperoxide Reductase; Helix-Turn-Helix Fis-Type; Antioxidant AhpC/TSA Family Protein
Number of amino acids: Translated: 211; Mature: 211
Protein sequence:
>211_residues MNSLLEEIKSYKDQFKQKAPAEKQRLMAQATQELKDSGIASGLTVGDQAPSFELPHADGTTVNLKTLLENGPVIVTFYRG GWCPYCNLELRAYQRELATIQEKGATLVAISPETPDYSLSTKEKNELDFYVLSDVDNIVARQFDLVFDIPDYLIDIYKAS GLNVDAHNGNEDWQLPKPATFIIQSDGTISFSDVPADYTERVDPKTVIEKL
Sequences:
>Translated_211_residues MNSLLEEIKSYKDQFKQKAPAEKQRLMAQATQELKDSGIASGLTVGDQAPSFELPHADGTTVNLKTLLENGPVIVTFYRG GWCPYCNLELRAYQRELATIQEKGATLVAISPETPDYSLSTKEKNELDFYVLSDVDNIVARQFDLVFDIPDYLIDIYKAS GLNVDAHNGNEDWQLPKPATFIIQSDGTISFSDVPADYTERVDPKTVIEKL >Mature_211_residues MNSLLEEIKSYKDQFKQKAPAEKQRLMAQATQELKDSGIASGLTVGDQAPSFELPHADGTTVNLKTLLENGPVIVTFYRG GWCPYCNLELRAYQRELATIQEKGATLVAISPETPDYSLSTKEKNELDFYVLSDVDNIVARQFDLVFDIPDYLIDIYKAS GLNVDAHNGNEDWQLPKPATFIIQSDGTISFSDVPADYTERVDPKTVIEKL
Specific function: Unknown
COG id: COG1225
COG function: function code O; Peroxiredoxin
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23570; Mature: 23570
Theoretical pI: Translated: 4.30; Mature: 4.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSLLEEIKSYKDQFKQKAPAEKQRLMAQATQELKDSGIASGLTVGDQAPSFELPHADGT CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCC TVNLKTLLENGPVIVTFYRGGWCPYCNLELRAYQRELATIQEKGATLVAISPETPDYSLS EEEEEHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCC TKEKNELDFYVLSDVDNIVARQFDLVFDIPDYLIDIYKASGLNVDAHNGNEDWQLPKPAT CCCCCCCCEEEECCHHHHHHHHHHEEEECHHHHHHHHHCCCCEEECCCCCCCCCCCCCEE FIIQSDGTISFSDVPADYTERVDPKTVIEKL EEEECCCEEEECCCCCHHHHCCCHHHHHHCC >Mature Secondary Structure MNSLLEEIKSYKDQFKQKAPAEKQRLMAQATQELKDSGIASGLTVGDQAPSFELPHADGT CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCC TVNLKTLLENGPVIVTFYRGGWCPYCNLELRAYQRELATIQEKGATLVAISPETPDYSLS EEEEEHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCC TKEKNELDFYVLSDVDNIVARQFDLVFDIPDYLIDIYKASGLNVDAHNGNEDWQLPKPAT CCCCCCCCEEEECCHHHHHHHHHHEEEECHHHHHHHHHCCCCEEECCCCCCCCCCCCCEE FIIQSDGTISFSDVPADYTERVDPKTVIEKL EEEECCCEEEECCCCCHHHHCCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: reduced acceptor; H2O2; reduced thioredoxin [C]
Specific reaction: reduced acceptor + H2O2 = Acceptor + H2O reduced thioredoxin + H2O2 = oxidized thioredoxin + H2O [C]
General reaction: Oxidoreductases; Acting on a peroxide as acceptor; Peroxidase [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA