Definition Exiguobacterium sp. AT1b, complete genome.
Accession NC_012673
Length 2,999,895

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The map label for this gene is bcp [C]

Identifier: 229915901

GI number: 229915901

Start: 144234

End: 144869

Strand: Reverse

Name: bcp [C]

Synonym: EAT1b_0169

Alternate gene names: 229915901

Gene position: 144869-144234 (Counterclockwise)

Preceding gene: 229915904

Following gene: 229915900

Centisome position: 4.83

GC content: 44.34

Gene sequence:

>636_bases
ATGAATTCATTATTGGAAGAAATCAAATCGTATAAAGATCAGTTTAAACAAAAGGCACCTGCCGAGAAGCAACGATTGAT
GGCTCAGGCGACTCAAGAATTGAAAGATTCAGGAATCGCATCAGGGTTAACAGTTGGAGATCAAGCGCCGTCGTTTGAAT
TGCCTCACGCGGACGGGACAACCGTCAATTTGAAAACGCTCCTTGAAAATGGACCAGTCATCGTCACATTTTACCGAGGT
GGATGGTGCCCATACTGTAACCTCGAGCTCCGCGCTTACCAGCGCGAGTTGGCAACGATTCAAGAAAAAGGCGCGACTCT
TGTCGCGATCAGTCCGGAAACGCCGGATTATTCCCTTTCGACGAAAGAAAAGAATGAACTTGATTTTTATGTATTGAGTG
ATGTTGATAATATTGTCGCACGTCAATTCGACCTCGTCTTTGACATACCAGATTACTTGATTGATATTTATAAAGCATCT
GGACTAAATGTCGATGCACATAACGGGAACGAGGATTGGCAGTTGCCGAAACCGGCCACGTTCATCATCCAATCTGATGG
AACGATTTCGTTCAGTGATGTGCCTGCTGACTATACAGAACGTGTCGACCCGAAAACGGTTATTGAAAAATTGTAA

Upstream 100 bases:

>100_bases
AATTTGAAATGGAGTTTCACCGTTGTGTTTGATTGAACAAATCAAACTATTCGTATTTACCAATAAATTGAGTTACCATA
TCGGAAAAGGGGGTCAAAGC

Downstream 100 bases:

>100_bases
AAAAAGGAGATGACACGCGTCATCTCAGCTTGTTGACAAATAACATGTTCGAACTCGTCCTTCCGGCGCCCACGCTTTCC
GCAGGCAATCCCGGAGCCGC

Product: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen

Products: Acceptor; H2O; oxidized thioredoxin [C]

Alternate protein names: Peroxiredoxin; Redoxin; AhpC/Tsa Family Protein; Peroxiredoxin-Like Protein; Redoxin Superfamily; Antioxidant AhpC/TSA Family; AhpC-TSA; Peroxiredoxin/AhpC/Tsa Family Protein; AhpC/Tsa Family Protein Selenocysteine-Containing; Bacterioferritin Comigratory Protein; Alkyl Hydroperoxide Reductase/Thiol Specific Antioxidant; Peroxiredoxin Family Protein; Peroxiredoxin Thioredoxin-Like Fold Protein; Redoxin Domain Protein; Alkyl Hydroperoxide Reductase; Helix-Turn-Helix Fis-Type; Antioxidant AhpC/TSA Family Protein

Number of amino acids: Translated: 211; Mature: 211

Protein sequence:

>211_residues
MNSLLEEIKSYKDQFKQKAPAEKQRLMAQATQELKDSGIASGLTVGDQAPSFELPHADGTTVNLKTLLENGPVIVTFYRG
GWCPYCNLELRAYQRELATIQEKGATLVAISPETPDYSLSTKEKNELDFYVLSDVDNIVARQFDLVFDIPDYLIDIYKAS
GLNVDAHNGNEDWQLPKPATFIIQSDGTISFSDVPADYTERVDPKTVIEKL

Sequences:

>Translated_211_residues
MNSLLEEIKSYKDQFKQKAPAEKQRLMAQATQELKDSGIASGLTVGDQAPSFELPHADGTTVNLKTLLENGPVIVTFYRG
GWCPYCNLELRAYQRELATIQEKGATLVAISPETPDYSLSTKEKNELDFYVLSDVDNIVARQFDLVFDIPDYLIDIYKAS
GLNVDAHNGNEDWQLPKPATFIIQSDGTISFSDVPADYTERVDPKTVIEKL
>Mature_211_residues
MNSLLEEIKSYKDQFKQKAPAEKQRLMAQATQELKDSGIASGLTVGDQAPSFELPHADGTTVNLKTLLENGPVIVTFYRG
GWCPYCNLELRAYQRELATIQEKGATLVAISPETPDYSLSTKEKNELDFYVLSDVDNIVARQFDLVFDIPDYLIDIYKAS
GLNVDAHNGNEDWQLPKPATFIIQSDGTISFSDVPADYTERVDPKTVIEKL

Specific function: Unknown

COG id: COG1225

COG function: function code O; Peroxiredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23570; Mature: 23570

Theoretical pI: Translated: 4.30; Mature: 4.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSLLEEIKSYKDQFKQKAPAEKQRLMAQATQELKDSGIASGLTVGDQAPSFELPHADGT
CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCC
TVNLKTLLENGPVIVTFYRGGWCPYCNLELRAYQRELATIQEKGATLVAISPETPDYSLS
EEEEEHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCC
TKEKNELDFYVLSDVDNIVARQFDLVFDIPDYLIDIYKASGLNVDAHNGNEDWQLPKPAT
CCCCCCCCEEEECCHHHHHHHHHHEEEECHHHHHHHHHCCCCEEECCCCCCCCCCCCCEE
FIIQSDGTISFSDVPADYTERVDPKTVIEKL
EEEECCCEEEECCCCCHHHHCCCHHHHHHCC
>Mature Secondary Structure
MNSLLEEIKSYKDQFKQKAPAEKQRLMAQATQELKDSGIASGLTVGDQAPSFELPHADGT
CCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCC
TVNLKTLLENGPVIVTFYRGGWCPYCNLELRAYQRELATIQEKGATLVAISPETPDYSLS
EEEEEHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCC
TKEKNELDFYVLSDVDNIVARQFDLVFDIPDYLIDIYKASGLNVDAHNGNEDWQLPKPAT
CCCCCCCCEEEECCHHHHHHHHHHEEEECHHHHHHHHHCCCCEEECCCCCCCCCCCCCEE
FIIQSDGTISFSDVPADYTERVDPKTVIEKL
EEEECCCEEEECCCCCHHHHCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: reduced acceptor; H2O2; reduced thioredoxin [C]

Specific reaction: reduced acceptor + H2O2 = Acceptor + H2O reduced thioredoxin + H2O2 = oxidized thioredoxin + H2O [C]

General reaction: Oxidoreductases; Acting on a peroxide as acceptor; Peroxidase [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA