| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is dfrA [H]
Identifier: 229915873
GI number: 229915873
Start: 113442
End: 113930
Strand: Reverse
Name: dfrA [H]
Synonym: EAT1b_0140
Alternate gene names: 229915873
Gene position: 113930-113442 (Counterclockwise)
Preceding gene: 229915874
Following gene: 229915866
Centisome position: 3.8
GC content: 48.26
Gene sequence:
>489_bases ATGATTTCACACGTCGTCGCATATGGGCAGAATCGCGAAATCGGAAAAGACAATGATTTATTATGGCGCTTACCAGATGA CTTGAAACATTTCAAGGCCATCACGTCTGGCGGGACGGTCGTGATGGGAAGAAAGACGTTTGAGTCCATCGGTAAAGCGT TGCCGAACCGACGCAACATCGTCGTCACATCTGATGTTTCCTTTTCAGCCGATCAAGTCGAAGTGTGGCATGATTTAGAC CGTCTCGCCGAAATGAGTCAACAGGAAGAATGGTTTGTCATCGGTGGGGCCATGTTATATGAACAGACGATGCCGATGAC GAGCCGGATCTATGCAACGGAAGTCGCTGCATCGTTCGAGGCCGATACGTATTATCCCGAACAGACTGGGGAATGGTCCG TTACGAGTACGATCGACCACCCGCAAGATGAAACACATGCATATGCCTTTTCATTCAAACAATACGACAAAACAGACATC GCATCATGA
Upstream 100 bases:
>100_bases ACATTGTCCGTGACGTATCTTCAATTGAATCATTCCGTTTTGAAGACTTCGAAATTCTCGGTTATGACCCGCATCCACAT ATTAAAGGAGAAGTGAGCGT
Downstream 100 bases:
>100_bases TGTCTGTTTTTTAGTCTGGCAATTTTTCTAGCCACTGTTCAATTTTTCTCGTGATGACTTCGTCCTGTCCTCCGTCCGCA TAATCGTCATAGATCGCTTC
Product: dihydrofolate reductase region
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 162; Mature: 162
Protein sequence:
>162_residues MISHVVAYGQNREIGKDNDLLWRLPDDLKHFKAITSGGTVVMGRKTFESIGKALPNRRNIVVTSDVSFSADQVEVWHDLD RLAEMSQQEEWFVIGGAMLYEQTMPMTSRIYATEVAASFEADTYYPEQTGEWSVTSTIDHPQDETHAYAFSFKQYDKTDI AS
Sequences:
>Translated_162_residues MISHVVAYGQNREIGKDNDLLWRLPDDLKHFKAITSGGTVVMGRKTFESIGKALPNRRNIVVTSDVSFSADQVEVWHDLD RLAEMSQQEEWFVIGGAMLYEQTMPMTSRIYATEVAASFEADTYYPEQTGEWSVTSTIDHPQDETHAYAFSFKQYDKTDI AS >Mature_162_residues MISHVVAYGQNREIGKDNDLLWRLPDDLKHFKAITSGGTVVMGRKTFESIGKALPNRRNIVVTSDVSFSADQVEVWHDLD RLAEMSQQEEWFVIGGAMLYEQTMPMTSRIYATEVAASFEADTYYPEQTGEWSVTSTIDHPQDETHAYAFSFKQYDKTDI AS
Specific function: Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis [H]
COG id: COG0262
COG function: function code H; Dihydrofolate reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 DHFR (dihydrofolate reductase) domain [H]
Homologues:
Organism=Escherichia coli, GI1786233, Length=159, Percent_Identity=34.5911949685535, Blast_Score=100, Evalue=9e-23, Organism=Drosophila melanogaster, GI116008026, Length=140, Percent_Identity=32.1428571428571, Blast_Score=71, Evalue=3e-13, Organism=Drosophila melanogaster, GI24647458, Length=140, Percent_Identity=32.1428571428571, Blast_Score=71, Evalue=3e-13,
Paralogues:
None
Copy number: 640 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 10,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012259 - InterPro: IPR017925 - InterPro: IPR001796 [H]
Pfam domain/function: PF00186 DHFR_1 [H]
EC number: =1.5.1.3 [H]
Molecular weight: Translated: 18409; Mature: 18409
Theoretical pI: Translated: 4.51; Mature: 4.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISHVVAYGQNREIGKDNDLLWRLPDDLKHFKAITSGGTVVMGRKTFESIGKALPNRRNI CCCCEEEECCCCCCCCCCCEEEECCHHHHHHHHHCCCCEEEECHHHHHHHHHHCCCCCCE VVTSDVSFSADQVEVWHDLDRLAEMSQQEEWFVIGGAMLYEQTMPMTSRIYATEVAASFE EEECCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHCCCCHHHHHHHHHHHHCC ADTYYPEQTGEWSVTSTIDHPQDETHAYAFSFKQYDKTDIAS CCCCCCCCCCCEEEEECCCCCCCCCEEEEEEECCCCCCCCCC >Mature Secondary Structure MISHVVAYGQNREIGKDNDLLWRLPDDLKHFKAITSGGTVVMGRKTFESIGKALPNRRNI CCCCEEEECCCCCCCCCCCEEEECCHHHHHHHHHCCCCEEEECHHHHHHHHHHCCCCCCE VVTSDVSFSADQVEVWHDLDRLAEMSQQEEWFVIGGAMLYEQTMPMTSRIYATEVAASFE EEECCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHCCCCHHHHHHHHHHHHCC ADTYYPEQTGEWSVTSTIDHPQDETHAYAFSFKQYDKTDIAS CCCCCCCCCCCEEEEECCCCCCCCCEEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2840350; 9384377 [H]