Definition Vibrio cholerae MJ-1236 chromosome 1, complete genome.
Accession NC_012668
Length 3,149,584

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Identifier: 229608821

GI number:

Start: 3054481

End: 3056619

Strand: Reverse

Name: Not Available

Synonym: VCD_003743

Alternate gene names: NA

Gene position: NA

Preceding gene: 229608824

Following gene: 229608820

Centisome position: NA

GC content: NA

Gene sequence:

>2139_bases
TTGCTATGTCACCTGACAGAGCGGATACAACTGGCACTGGAACGGTTAACTGATGGGTTCATTTACCATATCCGCAAGCA
ACAAGAAGCTGCCAACACCTTTGCACAACAAGCAGTGTTCCTGTCCTGGCAGTCAGCCGCGGACAATGTCACGAAAGCGG
CAGAGTTACTGCATCTGTTTGTGGATGAGAACATTGATGATAATCAACCCTTCTCAGTAGTCAGACAACAGGCATTGAAG
GTCATGAATGACAGGGATATCCAGACCCTCTGCCTTTACCTGAAAAAACAGAAACGGACCGTGGAAGAGTACCAGTGGCA
ACATTACGATGAACAATGCAATCTCCTGGAGCAACTGTTAAGGCAGGTGTTCTTGTGCCTTGAATGTGAGGCCGGTAAAG
GCTCAGAAGCCGTCGTCGCCCAACTTCAACAGATGCAGACGGAAATCGCATTCGGTGGACCACTGAAGACGATGGATACG
TCGCTCATCCCGAAAAAGCACCTCCCATGGTTGGTTAAACAGGATAACGTTAACCCGCAACGTTACGAATGGCTGCTCTA
CCGGCAGTTAACCTCACGACTGAATGGACGCATTTATTTGCCAAATGTTACCAAATACCGCGCACTGGAAGACGACCTGA
TCCCCCAGACATCGCAGGATACCTTGCTGGCCTCATCAACACTGGACAGACTAAAACAGCCCGCAGAGTTATTGTTACAG
GAGAAACAACACCGGCTGGAAAGTGCACTCAAAGACGTTGCTCTCCATATTGATGAGGGAGACAATCGAAATGTGATCAT
GAAAAATCGTACCGGTACCCGCTGGCGTCTGCCGACCAAAAGCGCTACATCTCTGGTCAACAATCCCTTTTTTAAGCGAA
TGCAACCGGTCGGTATCGCGGATGTACTGCGGTATGTAGAGCGCGAAACCGGGTTCATGAAATGTCTGACTCATGTACTT
CCGATACAAAAACAAGGGTTCACTCATCAGGATGATTTACTGGCCATTCTGATTGCCAACGCCACTCACCGTGGTGTGTA
TGGCATGGCGCAGATCTCCGATCGAAGCTATGAACACCTGAGTACGGTGCAGGCCAACTATATCCGGCCTGAAACGCTGC
ATGACGCCAGCGACGTGATCAATAATGCGGTTGCAGCGCTACCCATCTTCCGCCACTACCATATTCAGGAGGACCAGCTG
CATGCCAGTGCGGATGGTCAGAAATTCGAAACCCATCTGGAAACCTTTAAAACCCGGTACTCCTCTAAGTATTTCGGCAC
CAACAAAGGGATCACGGCCATGACACTGGTGGCCAACCACAGCGCCCTCAATGCTCGGATCATCGGTTCCAACGAGCACG
AATCACACTATATTTATGACCTGTTACAATCCAACAGCAGTGAAATCAAACCTGACGTACTCTCGACAGATACACACGGT
GTCAATCATGTTAACTTCGCCTTACTGGATCTATGCGGTTACAGTTTTGCACCGCGATACGCGCAGTTCAGTAGTGTCAT
CAATGATCTGTTTGATGTGACTGAAAGTGAACAAGGCAGCACCATACTGGCGCTAAAGAAGCCTATCAGAACGAATGTTA
TTACAACGGGATGGCAAGATATCAGGCGTATTGTTCTGTCACTTCAGACAAAGCGGACGACACAAGCAATGCTGGTAAGA
AAGTTGTCTGGTTACCCTTCTGGACACCCAATATTACAGGCTCTGACGGAGTATAATCGACTGGTTAAAGCGCAATATTT
ACTTGACTACATCGACGATGCCAGTTTGCGGCAGTATGTGCAACGTGCCCTGAACCGGGGAGAAGCATGGCACTTCCTTA
GACGAGCCATTGCGTCGGTGAATGGTGATCAGTTCCGTGGCAAAAACGAGTCTGAAATCGCTATCTGGAATGAATGCGCA
AGATTGCTTGCCAACGCGATCATCTACTTCAACTCCGCGATACTGAGTCATCTTCTGGGACACTTTGAAGCGAGAGGAGA
TGAAGAGAAAGCGGGTATCACTCGTGCTGTTTCGCCCGTTGCGTGGCAAAATATCAACTTAAGCGGAACGTATAACTTCA
CTAATACTGGGAAATTGCCCAATATTGGCGAAATAACAAGGCCGATAGTGGATGATTAG

Upstream 100 bases:

>100_bases
GCTTAATCTGTCTCTTAAAAATCGACAACACTTCGGTGAGCTCATCAACTATTACGGTAGTAAACTCAAACGATTCAAAC
GCGCACAGCAGCATCTATGG

Downstream 100 bases:

>100_bases
GCTCCAAGCTGAAAGTAAACCACCTCCGCAGCCATTTATTGGTGTGGTCTACAGAGGATTATGTCTTTTTAGAGGGGAAA
ATCCCTAGAACCCCACCTTG

Product: transposase Tn3 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>712_residues
MLCHLTERIQLALERLTDGFIYHIRKQQEAANTFAQQAVFLSWQSAADNVTKAAELLHLFVDENIDDNQPFSVVRQQALK
VMNDRDIQTLCLYLKKQKRTVEEYQWQHYDEQCNLLEQLLRQVFLCLECEAGKGSEAVVAQLQQMQTEIAFGGPLKTMDT
SLIPKKHLPWLVKQDNVNPQRYEWLLYRQLTSRLNGRIYLPNVTKYRALEDDLIPQTSQDTLLASSTLDRLKQPAELLLQ
EKQHRLESALKDVALHIDEGDNRNVIMKNRTGTRWRLPTKSATSLVNNPFFKRMQPVGIADVLRYVERETGFMKCLTHVL
PIQKQGFTHQDDLLAILIANATHRGVYGMAQISDRSYEHLSTVQANYIRPETLHDASDVINNAVAALPIFRHYHIQEDQL
HASADGQKFETHLETFKTRYSSKYFGTNKGITAMTLVANHSALNARIIGSNEHESHYIYDLLQSNSSEIKPDVLSTDTHG
VNHVNFALLDLCGYSFAPRYAQFSSVINDLFDVTESEQGSTILALKKPIRTNVITTGWQDIRRIVLSLQTKRTTQAMLVR
KLSGYPSGHPILQALTEYNRLVKAQYLLDYIDDASLRQYVQRALNRGEAWHFLRRAIASVNGDQFRGKNESEIAIWNECA
RLLANAIIYFNSAILSHLLGHFEARGDEEKAGITRAVSPVAWQNINLSGTYNFTNTGKLPNIGEITRPIVDD

Sequences:
NA

Specific function: NA

COG id: COG4644

COG function: function code L; Transposase and inactivated derivatives, TnpA family

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA