Definition Vibrio cholerae MJ-1236 chromosome 1, complete genome.
Accession NC_012668
Length 3,149,584

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Identifier: 229608796

GI number:

Start: 3026042

End: 3029668

Strand: Reverse

Name: Not Available

Synonym: VCD_003718

Alternate gene names: NA

Gene position: NA

Preceding gene: 229608797

Following gene: 229608795

Centisome position: NA

GC content: NA

Gene sequence:

>3627_bases
ATGAATACGAACAACATTAAAAAATACGCACCAAAAGCGCGCCGCGAATTTATGGATGCGGTAGCTAAACGATTAAATAC
CTTTGGTATCACCGCGAATAAAAAGGGCGAGCTACAAATTGCAGAAGCGAATCTACAAGGTTCTGTACTTCAAATCGCCG
GTAACAGTTTTGACGGTAAACTGGCCGAGCCCAGAAAACGCATAGTAGCCAGAAGCCAGAAACTTGGGTATACACAACTT
ATTGAACAAGTAGCTTATACCTGGTTCAACCGTCTGTGTGCTATTCGCTATATGGAAATCCATGACTATCTAGGCCACGG
TTTCCGTGTTTTGTCGCATCCAGACAATCCTAAAGGCTTTGAAATTATCGATCATGCGCAAGATGCTGCGGATGAACTCG
GATTAGATAGAGCTCGCATTATTGAACTCAAGCTTGCGGGCAACAAAGACGAAGAGCTGTATCGTGAACTGCTGTTAGGC
CAGTGCCATAAGCTTCATGAAGCGATGCCTTTCTTATTTGACGCATTGGACGATGAAACAGAACTTCTGCTACCAGACAA
CCTAACACGTACCGACTCAATACTGCGTGGATTGGTAGACAGCATTCCTGAAGATGACTGGCAACAAGTCGAAGTGATTG
GTTGGCTTTACCAGTTTTACATTTCTGAAAAGAAAGATCAGGTAATGGGTAAGGTGGTCAAGAGTGAAGACATCCCTGCC
GCCACCCAGCTATTTACACCCAACTGGATTGTGAAGTACCTGGTACAAAACTCAGTCGGTCGCCAATGGCTGCAAACCTA
CCCAGACTCTGCCATTAAAACGCAGATGGAATACTACATTGAGCCTGCTGAACAATCTGACGAAGTTAACCAACAGCTAA
AGGCTATTACGCCAGAATCTATTGAACCTGAAACCATCAAAGTACTTGACCCAGCTTGTGGTTCGGGCCACATATTGATT
GAAGCCTATAACGTGCTAAAAGCCATCTACGAAGAGCGTGGTTTCCGCTCTCGTGACATTCCAAAGATGATTCTGGAGAA
CAACCTCTACGGCCTAGACATAGATGATCGTGCAGCGCAGTTATCTGGCTTTGCGCTGATGATGATGGCTAGAGATGACG
ATAAGCGTATTTTTACCCGTAACGTGCGACTTAATGTACTGTCATTGCAGGAAAGTAACCATATCGACCTGCCAACGTTG
TGGAAAGCACTCAACCTATCGGGAAGTTGGCAAAGCGGCACATCACAAGGCTTGTTCTCAGATGATGAGCAAGATTTAAG
CTCGTTCAACGCAGACAACCGCTACCAACTGCTGAAGCGAACGTTGGCAAGATTTACTCAGGCTAAGACCTTTGGTTCTT
TGATTGATGTTCCAAACGATGATCATGAGCAGCTAAAAGAGCTACTTTGCACTCTAGTCGAGCTACAAGAGTCAGGAGAC
TCAATGCAGAAGCCTGCGGCGAAGCAATTGATTGAATTTGTACATCAGGCACTGGTTCTGTCGATTCGTTACGATGCTGT
GATTGCTAATCCACCATATATGGGGGGAAAAGGCATGAATGTCGAGCTGAAGAACTTCGCAGTAGAGCGATATCCAAATA
GTAAATCGGATTTGTTTGCTATTTTCATGGAACGTGGTTTCTCGTTACTCTCTCAAGATGGTTTTAATGCACAAGTAAAT
ATGCAGTCTTGGATGTTTCTTTCGAGTTATGAAAAGTTAAGAAATTCACTTCTAGAGAATCAGACTTTACTGACGATGGC
ACACTTAGGCGCTAGAGCATTCGGTCAAATAAGTGGAGAAATTGTTCAAACAACTGCATGGGTATTTAAGAATGGTTATG
TAAGGGGACATCAGCCAGTATTTTTTAGACTAACGGATGGCAACGAGCAAGAAAAGAAATTAGCCCTTATTGAACAGCAG
ACTCGCCTTGATGAGGTGCAACAGGAAGATTTTCTAATTATACCAGGACGCCCATTGACATATTGGCTTTCTTCAAAGGT
TTTTGAACTTTTTAAAAACAATAAAAGTTTTGGTGATATATATGATGCAAGGCAAGGCTTGGCGACGGGTGATAATAATA
AATTCCTAAGGTACTGGTGGGAGGTTGATTTCTCTAAAATATTTTTTGATGCAAAAAGTATCGAAGAATCAATGACCTCT
GGCTGCAAGTGGTTTCCTTATAATAAAGGTGGATCATTTAAAAGATGGTATGGCAATCATGAGTACATTGTAAATTGGGA
GAGTGACGGTTGTGAAATTCGTAATTTCTTTGGTGAGAACGGTAAATTGCTTTCTCGACCACAGAATACGAAATATTATT
TTAAACCTAGTATAAGCTGGTCTGATATTAATACGTCATATAATTCGTTTAGATACTACCCTCATGGTTTTATTCATGAT
GCTACAGGGCATTCAGCATTTAATTGGAATGAAAATGAGAAGCGTATAGCTTTAGCATTTTGTAACAATAAATTGGCTTC
TGAACTGATCTCGGCTTTGAATCCAACAATACATTTTCATATTGGTTATTTTAATGCTCTTCCTTATGTGCAAAATTTGA
TTGACGCTGATTTGTCCCATGTAGATGAACTGATTACACTGATGAAGCTTGATTATGACTCAAGGGAAACGAGTCGGGAG
TTTTCTTTGTGCCTTGCTTCCCACGATTCAGAAAAGATTTCGGATTGGTTTCGGAATAAACTAGCGCTTAATGAACTCCA
TATAAATTCAGTCCAGTCTTTAGAAAAGAAGAATAATGAAATAACACTAGAAGCATGTGGTTTGTTAGATGTTTACGGTA
CAGATCTAGATGAAAAAGAAATTTCAATCGAGAAAATAACTGCTTGCGATATAGCAGTTAACATTGTATCTCTTTCAGTT
GGTTGTATGCTTGGCAGATTTTTGCTCAAAAAGGGAAATGATGCCCTTCAAGACAAAGTCAAATTCAATTTAGAGTTTTA
CAACAGTAAAGAAGAAGAAATTTTTTACCAAATCGATGAAGACGGTATCATCCCTCTAACCGACAAAGAGTGGTTCAAAG
ATGACGCAACCAATCGTTTCCGTGAGTTTGTCCAAGTTGTTTGGGGTGAAGAACACTTACAAGAAAATCTCGATTTTGTT
GCCGAGTCACTGTGCTTAAATGCCATTAAGCCCAAGAAATCTGAATTAGCACTGGAGACGATCCGCCGTTATTTATCGAC
TCAGTTCTACAAAGATCATCTGAAGACATACAAAAAACGCCCTATTTATTGGCTGTTTAGCTCAGGCAAACAAAAGGCAT
TTGAGTGTTTGGTTTACCTGCATCGTTATAACGAGGGTACGCTTTCTCGTATGCGTACTGAGTATGTCACCCCGCTACTA
GGCAAATACGATGCTTATGCAGAGCAACTTGAGAAGCAGATTGAAACGGCAGACTCAACCAGTGAAGCGAACCGCTTCAA
GAAAGAGTTGGATGCTTTAATCAAGAAACAGGTCGAACTACGCGAGTTTGATGACAAGCTAAAACACTACGCCGATATGC
GTATTTCACTGGATCTTGATGATGGCGTGAAAGTGAATTACGGCAAGTTTGGTGATCTGTTGGCTGATGTTAAGGCCATT
ACCGGTTCGGCCCCGGAGGTTAACTAA

Upstream 100 bases:

>100_bases
GGACTTTTACCGCGAGCGTCAGGAAACACTGCTTGCCCGCATTAGAACTGCATTACAACCCGCAAGCAGCGTAGAGACAG
AATAAGAGGCGCAAGATCAT

Downstream 100 bases:

>100_bases
TGCAGATTAGTGAACTGGCACAAGGCGTTGCTGCCAAACTTGAACAAAGCCGCATTGTGTTTTGGTACGACCCAGAGCAA
AGCTTTACTGAAGAGCTTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1208_residues
MNTNNIKKYAPKARREFMDAVAKRLNTFGITANKKGELQIAEANLQGSVLQIAGNSFDGKLAEPRKRIVARSQKLGYTQL
IEQVAYTWFNRLCAIRYMEIHDYLGHGFRVLSHPDNPKGFEIIDHAQDAADELGLDRARIIELKLAGNKDEELYRELLLG
QCHKLHEAMPFLFDALDDETELLLPDNLTRTDSILRGLVDSIPEDDWQQVEVIGWLYQFYISEKKDQVMGKVVKSEDIPA
ATQLFTPNWIVKYLVQNSVGRQWLQTYPDSAIKTQMEYYIEPAEQSDEVNQQLKAITPESIEPETIKVLDPACGSGHILI
EAYNVLKAIYEERGFRSRDIPKMILENNLYGLDIDDRAAQLSGFALMMMARDDDKRIFTRNVRLNVLSLQESNHIDLPTL
WKALNLSGSWQSGTSQGLFSDDEQDLSSFNADNRYQLLKRTLARFTQAKTFGSLIDVPNDDHEQLKELLCTLVELQESGD
SMQKPAAKQLIEFVHQALVLSIRYDAVIANPPYMGGKGMNVELKNFAVERYPNSKSDLFAIFMERGFSLLSQDGFNAQVN
MQSWMFLSSYEKLRNSLLENQTLLTMAHLGARAFGQISGEIVQTTAWVFKNGYVRGHQPVFFRLTDGNEQEKKLALIEQQ
TRLDEVQQEDFLIIPGRPLTYWLSSKVFELFKNNKSFGDIYDARQGLATGDNNKFLRYWWEVDFSKIFFDAKSIEESMTS
GCKWFPYNKGGSFKRWYGNHEYIVNWESDGCEIRNFFGENGKLLSRPQNTKYYFKPSISWSDINTSYNSFRYYPHGFIHD
ATGHSAFNWNENEKRIALAFCNNKLASELISALNPTIHFHIGYFNALPYVQNLIDADLSHVDELITLMKLDYDSRETSRE
FSLCLASHDSEKISDWFRNKLALNELHINSVQSLEKKNNEITLEACGLLDVYGTDLDEKEISIEKITACDIAVNIVSLSV
GCMLGRFLLKKGNDALQDKVKFNLEFYNSKEEEIFYQIDEDGIIPLTDKEWFKDDATNRFREFVQVVWGEEHLQENLDFV
AESLCLNAIKPKKSELALETIRRYLSTQFYKDHLKTYKKRPIYWLFSSGKQKAFECLVYLHRYNEGTLSRMRTEYVTPLL
GKYDAYAEQLEKQIETADSTSEANRFKKELDALIKKQVELREFDDKLKHYADMRISLDLDDGVKVNYGKFGDLLADVKAI
TGSAPEVN

Sequences:
NA

Specific function: NA

COG id: COG1002

COG function: function code V; Type II restriction enzyme, methylase subunits

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA