Definition Vibrio cholerae MJ-1236 chromosome 1, complete genome.
Accession NC_012668
Length 3,149,584

Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 229608769

GI number:

Start: 2988974

End: 2992615

Strand: Reverse

Name: Not Available

Synonym: VCD_003691

Alternate gene names: NA

Gene position: NA

Preceding gene: 229608770

Following gene: 229608768

Centisome position: NA

GC content: NA

Gene sequence:

>3642_bases
ATGGCTTGCTTGCCCTTACATGGTGTGGCCGCTGATGTGCAGCGCCAATCCGGCTTAAGCGGACAACAAGAAGGTAAGCA
ATTACTGCAAAACTGGACGATGCCCGCACTTAACGGCAATACATTGTTGGTGCCGAGTGGCAGTGGTAATGAGTCCATTA
ACTTGCAAGAGCTATTTCCTGGTATGGATCAGGGCTCATTAGATGTCTTAACGGGCGTTTATGGCTCTGATGCCAGCATG
AATCAATTGGGGACGCAGCGCCAAGAGAGCATGGCATCCGAAAGTGGCGCTACGGGTGAGGCGTTTCGCTCGCTACAGCA
AATCAAAGACAGGTCTCGGCCAGATATGGTCAATGATCCGCTTTGGGCATTAACTGATGCGGTTCAAACTGACCCCAATC
TATTAACCCAAAGCTTCCCCGGCTGTGAGTCTCAAGGTGAAGGCAGCCCAAATTACCAGCAATGTGACAGGCTCAATACA
GCGGTTAACAGCTGCACTATTACTCACGATTACACGGCAGGCATCATTGAGCATGTTTCAGGGCCGATGAACCTTCGCTC
TTGTGGTGAGGGGTGTCTTGAAGTTTGGATTGGACGAATTGGCGACAACTACTGGAGTGGCCGTTGTAAAGTGTTTGAAC
AGGCCATCACACTCAAAGTCGTGAACCCCGATGCGATTACCTCAGCCGTTCTTGAATACGCCAAATGGGATGACTACATG
CAAGTGTGGCTTGGTGATCAGAAAGTCTGGTCTGGGCCGAACAATAACTTTCCACCAGAAACGGCAGGTCGTTGCGAGCT
CAGTACCAGTTGGGAGCGCAATCCAAATACCGATCTCACTGCCAAGCTAAAAGCGGTAGAACCAGGTTTAGAAGTGCCGG
TAAAAATTCGCGTATCGGTTACGGGTAGTGGTGAGGGCTATGCACGCATAAAGGTGCGCTTTGATCCAACCAAGGTAGTG
ATGAATGATAGTTGGTCGCCACAATCCTGTATCGAACAAGCAGCGGATATCCCGACGAAGTTTTCAGACTACAGCATTCA
ATGCACGGATCAGCCTTCTTCAACCAACGGATGTACGGTGGTCAATGGTGTTTCAGTTTGTGAATCCTACTTTGCCCCTA
GCCCTGTGGCTGGCATATCGCCTTTGTGTCGGCGTGTACAAGTCAGTGTGGATGATGAAAGCTATAAGGGGATTGAAAAT
CAGGCCTGCCAAGTGCTTGAAGCGAATCCTTCCTGTGGATTCATGTCGTCAGAATGTGCCGAGACCAATGATAAAGGTGA
ATGCATTCGTTTTACCGATACCTATGACTGTGGATTGCAAACCAGCGATCCAAAGTGTGTGGTATCTAACCTTATGCCAA
GTAGTTTTGAGGCCTGTGAGCCTACTCAGACGATTACGCCATTTACTGAAACCAAGCATGTACCGGATTACCAGGTGTGC
GAGAAGATCAGCACGCTTACTGAGTGTCAGTTAGAACGACGTGTATCCGCTGAAACTCATCAACAAAGCTGGTCTATTGA
GCGTGGTTGCTTTAGCTCTGAAACGCTCAGCTTTGTTCCACAGCACAGCAGTACTATGCAAACTGGGAACGCGATACTGA
GAATTTTTGATAATCAAAATACTGAGATAAAAATTACCGAGTCGCCATCCAAGGCAAATGGTTGGAAAACGACACTCTCA
CTGACGGGCAATAAGGAAACGGTGACTGAGACGAAACCGTCCATTAAATACCCTGAAATGACGTGTCCAAAAGGAACCTT
GGTTGGTTCATTGTGTAAAGTCGCCAATGGGTCGATTATTTCGTGGCATGAACCTCAGGAAGTTACTCGTTCCAGATGTG
AATCCGGCTGGAACAAAGTCGATTTCGATACTTGCAGCCGAGAAGTTCAGAAGTGTTTGGCTCCTGCGAAACTGAGCGCT
TCATTGACCTTCTCTGGCAAGTACTTAGAACAGGACGTTGTTCATCAATCAAGTGATCCGGGCATAGACCAATGCTTGAT
GCAAACGGATCAGTTTACTGCCGTGCAGTGGCAGTGTTTGGATACGGGCACAAAACGAATCGACGGGTTAACGGTTGGTA
GTGGCGAGTTGGCCAATCTTGGGAGCCTTTATCCAGCGGTTGTTTCGTCTCCTGTTCATTTAACCAGTCGCGGCAGCTCT
GATGGACTGGGACTCTCATGCTGGAGGGCAAGAGCAACCTACAATGCTTCGACTGCTCATCCAGAGTTCAACATGGGCAG
CTCAGATAGCTGGGTAGATGCCAATGGTAATACACAAACCATCGTTAATAACGGACAAAACACGACCACCAATACGTGTG
CCGCGCTGGAGCAAAACCTGGCCTGCCAGTACGTCAGAACCGAATGCACTGAAGGCGGGGCTGGTCATGAAGGCTTCTGC
TATATCCAAAGTTTGGTGTATGACTGCGGACAAAGCGTTGAAGTGCAAAATGCACGAATGGAAACTCAATACAACTGTGA
GGGGCCAGTTCGCTGTATGGGCACAGATTGTTTAGAGCCAGAGTCAATCAAGCAGGCTAACTTTGCAGAAGCCGCAGCGA
TGCTTAATGCGGCGCAGTTTATGACCAATGATATGTCATGTACGGGAGCTGATGGCCAAGATAACGTCGAGTGTACGGTC
TTTAAAGGTAATGCTGGCCAGTGCAAAAAAGCCGTTGGTGGCATAGTGGATTGCTGTGAAAAGCCAAGTGGCGTGTCGTT
ATCGGATTACATCACGATGATAGTGGCGGTTAACAAGCTTGATACGGCAGTCATGGCCATGAATCCGTCTTCGGCAATCT
ATGGTTCGTGGAATACGCTCAGGGAACCAATCACCAGTACCTGGAGTGCGGTTAAAGAGCCTTTTGTGTCTGCATGGGAC
TCTCTCATGGGGGCTGGGCCATCAACGGCTGCTGGCGCGGGAGCGGAGCAAGCTGCGACTGGCTTTATGCAGGTGTTGAC
CAACAAAACGGCTGAGTGGGTAGGCTCTACGTTTGGTTCGGGGGCGCAATCGGCACTGTTTAGTAACGTTGGTGGTGCGG
TTGGAGCCGATGGTGTCGTTTCGGGTGGTAACTTTGCCCTGGGGGGCGCTGCGGGCGCGGTTCTGAGTACGGTTATGACG
GCCTACATGATTTATTCAGTCACTATGATCCTCATTCAGCTTATCTGGAAATGTGAGCAGAGCGAGTTTGAAATGAACGC
CAAGCGGGTATTGAAGAGTTGCCACTATGTAGGCTCTTACTGCAAGTCTAAGTTCTTAGGTGCCTGTGTTGAAAAACGGC
AGTCATATTGCTGTTTTACTTCGCCACTTTCACGGATCATTCAAGAACAAGTACGTCCTCAATTGGGCCTTGGTTGGGGC
AGTGCCAAGTCACCAAACTGTGAAGGTTTGACCGCGAGTCAGTTAAACCAGGTAGATTGGAGCCAAGTCAATCTCGATGA
ATGGATAGGTATCTTGTCGATAACAGGCAACCTACCCGAAGTACCGTCACTGGATCTGGAACGACTCACAGGCTCAGGAA
GTACGCTAAACGTTGATGGAAATCGTCAGAGTGCCGCAGATAGAGCCATTGAACGGCTAAACGGAATGGATGCACAGAAA
CTGCGTCAGGAGGCGACGGAAGAAATTTCGGGGAATAATTGA

Upstream 100 bases:

>100_bases
TCTACATTTTGTGGCGCTGGCAAGACTGCTGTAACTCGGGAGGTTAACTATGAAACCAACACTTTTTACCCGAGTTTTAG
CGGGTGTTTTATCAATCACT

Downstream 100 bases:

>100_bases
GCGTATCCATCTAAAACAGCTTTGCCAATAATGTTCCATCATGGTTACTTTAATGAGCTTATTGCGCCTTAAGGTAACCA
ATTTGGCACTTTGGGCCTCT

Product: IncF plasmid conjugative transfer protein TraN

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1213_residues
MACLPLHGVAADVQRQSGLSGQQEGKQLLQNWTMPALNGNTLLVPSGSGNESINLQELFPGMDQGSLDVLTGVYGSDASM
NQLGTQRQESMASESGATGEAFRSLQQIKDRSRPDMVNDPLWALTDAVQTDPNLLTQSFPGCESQGEGSPNYQQCDRLNT
AVNSCTITHDYTAGIIEHVSGPMNLRSCGEGCLEVWIGRIGDNYWSGRCKVFEQAITLKVVNPDAITSAVLEYAKWDDYM
QVWLGDQKVWSGPNNNFPPETAGRCELSTSWERNPNTDLTAKLKAVEPGLEVPVKIRVSVTGSGEGYARIKVRFDPTKVV
MNDSWSPQSCIEQAADIPTKFSDYSIQCTDQPSSTNGCTVVNGVSVCESYFAPSPVAGISPLCRRVQVSVDDESYKGIEN
QACQVLEANPSCGFMSSECAETNDKGECIRFTDTYDCGLQTSDPKCVVSNLMPSSFEACEPTQTITPFTETKHVPDYQVC
EKISTLTECQLERRVSAETHQQSWSIERGCFSSETLSFVPQHSSTMQTGNAILRIFDNQNTEIKITESPSKANGWKTTLS
LTGNKETVTETKPSIKYPEMTCPKGTLVGSLCKVANGSIISWHEPQEVTRSRCESGWNKVDFDTCSREVQKCLAPAKLSA
SLTFSGKYLEQDVVHQSSDPGIDQCLMQTDQFTAVQWQCLDTGTKRIDGLTVGSGELANLGSLYPAVVSSPVHLTSRGSS
DGLGLSCWRARATYNASTAHPEFNMGSSDSWVDANGNTQTIVNNGQNTTTNTCAALEQNLACQYVRTECTEGGAGHEGFC
YIQSLVYDCGQSVEVQNARMETQYNCEGPVRCMGTDCLEPESIKQANFAEAAAMLNAAQFMTNDMSCTGADGQDNVECTV
FKGNAGQCKKAVGGIVDCCEKPSGVSLSDYITMIVAVNKLDTAVMAMNPSSAIYGSWNTLREPITSTWSAVKEPFVSAWD
SLMGAGPSTAAGAGAEQAATGFMQVLTNKTAEWVGSTFGSGAQSALFSNVGGAVGADGVVSGGNFALGGAAGAVLSTVMT
AYMIYSVTMILIQLIWKCEQSEFEMNAKRVLKSCHYVGSYCKSKFLGACVEKRQSYCCFTSPLSRIIQEQVRPQLGLGWG
SAKSPNCEGLTASQLNQVDWSQVNLDEWIGILSITGNLPEVPSLDLERLTGSGSTLNVDGNRQSAADRAIERLNGMDAQK
LRQEATEEISGNN

Sequences:
NA

Specific function: NA

COG id: NA

COG function: NA

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA