Definition Vibrio cholerae MJ-1236 chromosome 1, complete genome.
Accession NC_012668
Length 3,149,584

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Identifier: 229608501

GI number:

Start: 2685587

End: 2688697

Strand: Reverse

Name: Not Available

Synonym: VCD_003419

Alternate gene names: NA

Gene position: NA

Preceding gene: 229608502

Following gene: 229608500

Centisome position: NA

GC content: NA

Gene sequence:

>3111_bases
ATGTGGTTGTCAGATGTATCGGTAAAGCGCCCTGTCGCAGCGTTAGTACTGAGTATGTTGCTGTGCGTGTTTGGTGTGGT
CTCTTTCACTAAACTTGCAGTACGTGAAATGCCGGATATTGAAAGCCCTGTGGTATCGGTTTCCACCCGTTATCAAGGCG
CTTCGGCCACCATTATTGAAAGTCAGATCACCAGCGTGCTAGAGGATCAATTAGCGGGCATCAGTGGGATTGATGAGATT
ACCTCAGTTAGCCGCAACGGAATGTCTCGTATCACGGTGACCTTCGAGCTTGGTTATGATCTCAATACCGGTGTGAGTGA
CATTCGTGATGCGGTGGCTCGGGCGCAGCGTTCACTGCCTGAAGAAGCGGACGATCCGCAGGTGTTCAAGAATAATGGCT
CTGGTCAGGCGTCGGTCTATATCAATCTCAGCTCCTCAGAAATGGATCGCACTCAGTTGACCGATTACATCGAGCGGGTG
TTGCTCGATCGGTTTAGCTTGATCTCCGGTGTGAGTTCGGTGGATGTCTCTGGCGGCCTCTATAAAGTGATGTATGTACG
CATCAAGCCAGAACTGATGGCGGGGCGCGGCGTTGCGACCAGCGATATTTCTGATGCACTCAACAAAGAGAACCTCGAAA
GTCCCGGAGGTCAGGTTCGCAACGATTCGACCGTGATGTCGGTGCGTACCGCGCGCGGTTATCAATCTGCTGAAGATTTT
GAGTATCTGGTGGTGAAACGTGCCAGTGATGGTACCCCCATCTACCTCAAAGATGTCGCGGATGTGTTTATTGGGGCGGA
AAACGAAAACTCGACCTTTAAAAGTGATGGCATCGTCAACGTGAGCATGGGGATTGTGCCGCAATCCGACGCGAACCCGC
TGGAAGTGGCGAAGCGCGTGCATGAAGAAGTGGATAAGGTTCAGCAGTTTTTACCCAAGGGTACCCGTTTAGCCATTGAC
TATGACTCAACGGTGTTTATTGAGCGCTCAATAAGCGAGGTGTATAGCACACTCTTTATCACGGGTGGCTTAGTGATTTT
GGTGTTGTACATTTTTATCGGCCAGTTGCGAGCCACCTTAATTCCTGCGGTAACGGTTCCGGTTTCGCTGATCTCGGCCT
TTATGGCTGCGTACTACTTCGGATTTTCTATTAACCTCATCACCTTAATGGCGCTGATCTTATCGATTGGTCTGGTGGTC
GATGATGCCATCGTGGTCGTTGAAAATATTTTTCACCACATTGAACGGGGCGAAAAACCTCTTTTAGCCGCCTACAAAGG
TACACGAGAAGTTGGCTTTGCCGTGATAGCCACGACTTTGGTACTGGTGATGGTGTTTCTGCCGATCTCGTTTATGGACG
GGATGGTCGGACTCCTGTTTACTGAATTCTCCGTACTACTGGCGATGGCAGTGATTTTCTCTTCTCTGATCGCGTTAACG
CTGACGCCAGTGCTTGGCAGTAAGCTTTTAAAAGCCAATGTAAAACCGGGACGCTTTAATCAGTTGATTGATAGGCTGTT
CGCACGACTGGAATCGGGCTATCGCCAAGTGGTAAGCCGAGCCATTCGTTGGCGTTGGGCGGCGCCGGTTGTGATTGCGG
CTTGTATTGGTGGTAGTTATGGTTTGATGCAACTGGTGCCAGCTCAGCTAACCCCTTCCGAAGATCGCGGTGTGATTTTC
TCTTTTGTGCGTGGTGCTGATGCCACCAGTTATAACCGCATGGCGGCTAATATGGATTTGGTTGAGCAGCGGTTGATGCC
CTTATTGGGTCAAGGCTTTTTGAAATCGTTTAGTATTCAATCACCTGCTTTTGGTGGTAACGCCGGTGACCAAACCGGTT
TCGTGATCATGATCCTTGAGGATTGGAATGATCGCACCGTTACTGCTCAGGAAGCATTAAGCCAAGTACGTAAAGCCTTA
GCGGGCATTCCTGATGTGCGGGTATTCCCATTCATGCCCGGTTTTCGTGGGGGCTCTAATGAGCCTGTACAGTTTGTGCT
TGGTGGCTCGGATTATAGCGAGCTCAAAACGTGGGCTGAGAAGTTAGAAGAGGAAGCGGAGAAGTCACCGTTTATGACGG
GGGCTGATATCGATTACTCAGAAAAAACGCCAGAGTTGGTGGTGACGATTGATAAGCAGCGCGCGGCGGAATTAGGAATC
AGCGTAAAATCGATCTCCGATACACTAGAGGTGATGCTGGGTGGCAAAAAAGTGACGACCTTCGTTGAGCGTGGTGAAGA
GTATGATGTGTATCTGCGTGGGGATGAAAACAGCTTCAACAATGCGGCGGATTTAAGCCAAATCTATATGCGAACCGCAA
CCGGTGAACTGGTGACACTGGATACGGTGACGCGTATTGATGAAGTGGCGTCAGCGATTCGTTTGGCGCACTACAATAAA
CAGAAATCCGTTACCATTACCGCAAACCTAGAAGCTGGGTACACGTTAGGGCAAGCGCTCGATTTTCTTGACCAAAAAGC
GCAAGAGATACTGCCAAATGATATCTCCGTTAGCTACTCGGGGGAGTCGAAAGATTTCAAAGAGAACCAATCAAGCGTAG
CCATTGTGTTTGCTCTGGCGCTGCTGGTTGCTTATTTGGTGCTGGCTGCTCAGTTTGAAAGCTTTATCAACCCGCTGGTG
GTAATGCTGACGGTACCTATGGGAGTATTTGGCGGTTTCCTTGGGCTGTTTGTTATGGGACAAGGGATGAACATTTACAG
CCAGATTGGCATGATCATGCTGATTGGTATGGTCACCAAAAATGGCATTTTGATTGTCGAATTTGCTAACCAACTGCGTG
ATCGCGGTGTTGAGTTTGAAAAGGCGATCATTGATGCATCGGCGCGCCGTTTGCGTCCAATCCTGATGACGGCTTTTACG
ACACTGGCTGGCTCTATTCCTTTGATCGTCTCAACAGGTGCAGGCTATGAGAGCCGAATTGCGGTCGGTACGGTGATTTT
CTTTGGGATGGGGTTTGCAACCTTAGTGACCTTGTTGGTGATTCCTGCCATGTATCGCTTGATTTCCGGTTCAACCCAAG
CCCCCGGTCATGTTGAAGCAGAGCTCAACCATGAGCTGCAACAAGATGTGAAAGGCCGCGCTCAACACTAA

Upstream 100 bases:

>100_bases
GCGAGAAAATTGTCGTTCAAGGCATAGTCAATATGCGTGACAACGCGCGTGTTAGCGAAGTCACCGTAGAAGGGCGTCCG
CTGAAGAAGGATGACAAATA

Downstream 100 bases:

>100_bases
AATTGGTTATCCCATCGCTTTGTACGGTGGGAAGATTTATATCTGCTGCAATGGATGGATATTGTTGTATTAGCAATATC
CATCCATTTTTTGTTTTCCT

Product: RND multidrug efflux transporter

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1036_residues
MWLSDVSVKRPVAALVLSMLLCVFGVVSFTKLAVREMPDIESPVVSVSTRYQGASATIIESQITSVLEDQLAGISGIDEI
TSVSRNGMSRITVTFELGYDLNTGVSDIRDAVARAQRSLPEEADDPQVFKNNGSGQASVYINLSSSEMDRTQLTDYIERV
LLDRFSLISGVSSVDVSGGLYKVMYVRIKPELMAGRGVATSDISDALNKENLESPGGQVRNDSTVMSVRTARGYQSAEDF
EYLVVKRASDGTPIYLKDVADVFIGAENENSTFKSDGIVNVSMGIVPQSDANPLEVAKRVHEEVDKVQQFLPKGTRLAID
YDSTVFIERSISEVYSTLFITGGLVILVLYIFIGQLRATLIPAVTVPVSLISAFMAAYYFGFSINLITLMALILSIGLVV
DDAIVVVENIFHHIERGEKPLLAAYKGTREVGFAVIATTLVLVMVFLPISFMDGMVGLLFTEFSVLLAMAVIFSSLIALT
LTPVLGSKLLKANVKPGRFNQLIDRLFARLESGYRQVVSRAIRWRWAAPVVIAACIGGSYGLMQLVPAQLTPSEDRGVIF
SFVRGADATSYNRMAANMDLVEQRLMPLLGQGFLKSFSIQSPAFGGNAGDQTGFVIMILEDWNDRTVTAQEALSQVRKAL
AGIPDVRVFPFMPGFRGGSNEPVQFVLGGSDYSELKTWAEKLEEEAEKSPFMTGADIDYSEKTPELVVTIDKQRAAELGI
SVKSISDTLEVMLGGKKVTTFVERGEEYDVYLRGDENSFNNAADLSQIYMRTATGELVTLDTVTRIDEVASAIRLAHYNK
QKSVTITANLEAGYTLGQALDFLDQKAQEILPNDISVSYSGESKDFKENQSSVAIVFALALLVAYLVLAAQFESFINPLV
VMLTVPMGVFGGFLGLFVMGQGMNIYSQIGMIMLIGMVTKNGILIVEFANQLRDRGVEFEKAIIDASARRLRPILMTAFT
TLAGSIPLIVSTGAGYESRIAVGTVIFFGMGFATLVTLLVIPAMYRLISGSTQAPGHVEAELNHELQQDVKGRAQH

Sequences:
NA

Specific function: NA

COG id: COG0841

COG function: function code V; Cation/multidrug efflux pump

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA