Definition Vibrio cholerae MJ-1236 chromosome 1, complete genome.
Accession NC_012668
Length 3,149,584

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Identifier: 229608356

GI number:

Start: 2528486

End: 2530507

Strand: Reverse

Name: Not Available

Synonym: VCD_003274

Alternate gene names: NA

Gene position: NA

Preceding gene: 229608358

Following gene: 229608355

Centisome position: NA

GC content: NA

Gene sequence:

>2022_bases
ATGCTACTTAACGCTTTTTCACGCCGAGTCTTCCTTTGGCTAGGTTGGCTATTGATTTCCACCAGCAGTTTAGCCGCTAC
ATCTACGACGTATAAGGTCGCCACCGAAGCGGATGACGTGGTGACTCGTGTGCTTTTTGATTCGATTGCTCACCACTTCA
ACCTTGAAATTGAATACGTCAACTACCCCAGTTTTAACGATATTCTGGTGGCGATAGAGACTGGCAACGCCGATTTTGCT
GCCAACATTACTTACACTGATTTGCGTGCTCAACGTTTTGATTTTTCAAGACCAACCAACATCGAGTACACCTATCTCTA
CAGTTATGGTGGCCTACGTTTACCCGAGTTGCGCCTCGTGGGTATCCCGAAAGGAACCACCTACGGGACCCTACTAAAAG
AACACTATCCCTATATCCAGCAAGTTGAGTATGAAGGGCATTTAGAAGCGCTCACTTTGCTGGAAAGTGGCCGAGTAGAC
GGAGTGGTTGATGCGATCAATCAGCTCAAACCTATGCTACTGAAAGGGCTTGATGTACAACTCCTTAACGACCAATTACC
GATTCAGCCTGTTTCTATTGTGACGCCTAAAGGCAAACACTCAGCGCTATTGGGCAAGATTGAAAAATACGCGCATTCGG
CTCACGTACAACGTTTATTGCGTGAATCGATCCAAAAGTATCAATTGGACATCCGTAAGCAAGCTCTGCGTCAATCCGTG
GTTGAGAGCGGACTCAACGTGCAGCGTGTATTGCGTGTTAAGCTAGAGAACAACCCGCAATATGCACTTTATCAGCCAGA
CGGTTCGGTTCGTGGGATCAGTGCTGATGTTGTGTTTCAGGCCTGTGAGATGCTACTGCTGAAATGCGAATTGGTCAGTA
ATGGTCAAGAAACATGGGAGAGCATGTTTGATGATTTACAGGATAAAAGCATCGATATTTTGGCTCCTATAACGGTTTCT
CAGCAGCGTAAAAACCTCGCTTACTTCAGTGAAAGCTACTACCACCCACAAGCGATTTTGGTCAAACGTGAACACTATAA
AGACGATGTGTATAGCAATGTGTCTGAGTTGGTGGCTGAACGTATTGGCGTCATCAAAGACGATTTTTTTGAAGAGCTGT
TACAGCAGATGCTGCCGAACAAGATCTTGTTCAGCTACGCAAGTCAGGAAGAGAAAGTTCAAGCCTTACTGAATAAAGAG
GTGGACTACATAGTGCTCAATAGAGCCAATTTTAATCTCTTGCTTCGCGAGTCAACGGAGATGTTACCGATTGTAGAAGA
CACCATGATTGGCAGTTTCTACCAATATGACATTGCGATAGGTTTTGCTAAAAATCCACTTGGTGCAACTCTGGCACCTC
TTTTCTCTCGGGCAATTAAAATGCTCAATACCGAACAGATCATACATACCTATGATTATCAGCCAAATTGGCGAGCCACA
TTACTTGCGGAAAAGAAATATCAGCGCAGTACTCAATGGCTTTTTGCCATGGCTTTCATCGTTTTGTTTATGGTGGCGTT
TTACCTCCATGGCATATCACATACCGATAACCTTACTAAGTTGCGCAATCGTCGCGCTTTGTATAACCGATACCGCCGCG
GGTTATCGCCTCGCCTAAGCTTGGTTTATCTTGACGTGAATACGTTTAAATCAATCAACGATCAGTATGGACATGAAGTG
GGTGACAAAGTCCTTAAGCAGTTGGCTCAGCGCATCGAAGCGGTATGGCGTGGGCGCAGCTATCGGATTGGTGGGGATGA
ATTTATTTTAATCGGTGAATGTTCTGCTAAGCGGCTTGAACATGTGGTTGCGCAATGTGAACGTTTTATGTTTGTGGATG
CAGAGCGCGATGTCAGTTTTGAAGTGAGTGTGGCGATTGGTATTGCTAAGAATCGTGAGCGGACCGAATCACTCAATGAG
GTGATGCACCAAGCGGATATTGCGATGTATCGCGCTAAGGCGGAATCGACGCAATCGCCATTTCAGGCTGCCAGCAAGGT
AAAAGGATTACACATCGTTTAA

Upstream 100 bases:

>100_bases
GGTGGCTCTATGAAATTTATTACCTAAAGTTGATAGTGGGGTGGGGGTATTTACGATAAAATGCGCAGCAAAAAATACAA
CATACCATTATTCAACGTCT

Downstream 100 bases:

>100_bases
TCAAACTGGTGAAATGCTGTTCGGTTGATGAGCAATGTGGGGGTAAATCAGGATTATCGCTTGCATTGCCTAAGTCGATG
TTTAATAATCGCACCCGCTT

Product: GGDEF domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>673_residues
MLLNAFSRRVFLWLGWLLISTSSLAATSTTYKVATEADDVVTRVLFDSIAHHFNLEIEYVNYPSFNDILVAIETGNADFA
ANITYTDLRAQRFDFSRPTNIEYTYLYSYGGLRLPELRLVGIPKGTTYGTLLKEHYPYIQQVEYEGHLEALTLLESGRVD
GVVDAINQLKPMLLKGLDVQLLNDQLPIQPVSIVTPKGKHSALLGKIEKYAHSAHVQRLLRESIQKYQLDIRKQALRQSV
VESGLNVQRVLRVKLENNPQYALYQPDGSVRGISADVVFQACEMLLLKCELVSNGQETWESMFDDLQDKSIDILAPITVS
QQRKNLAYFSESYYHPQAILVKREHYKDDVYSNVSELVAERIGVIKDDFFEELLQQMLPNKILFSYASQEEKVQALLNKE
VDYIVLNRANFNLLLRESTEMLPIVEDTMIGSFYQYDIAIGFAKNPLGATLAPLFSRAIKMLNTEQIIHTYDYQPNWRAT
LLAEKKYQRSTQWLFAMAFIVLFMVAFYLHGISHTDNLTKLRNRRALYNRYRRGLSPRLSLVYLDVNTFKSINDQYGHEV
GDKVLKQLAQRIEAVWRGRSYRIGGDEFILIGECSAKRLEHVVAQCERFMFVDAERDVSFEVSVAIGIAKNRERTESLNE
VMHQADIAMYRAKAESTQSPFQAASKVKGLHIV

Sequences:
NA

Specific function: NA

COG id: COG0834

COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA