| Definition | Vibrio cholerae MJ-1236 chromosome 1, complete genome. |
|---|---|
| Accession | NC_012668 |
| Length | 3,149,584 |
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Identifier: 229608336
GI number:
Start: 2509566
End: 2511176
Strand: Reverse
Name: Not Available
Synonym: VCD_003254
Alternate gene names: NA
Gene position: NA
Preceding gene: 229608337
Following gene: 229608335
Centisome position: NA
GC content: NA
Gene sequence:
>1611_bases ATGCAAAGCAACCGTGAAATTCTGCTAGTGGATGATGAACCTGCGGTGTTGAATGCCTTAAAGCGCGAGCTGCGTCCTTA TTTCCCCCATCTACATACCGCCACTTGTGCGCAAGAAGCGTTAGAGCTTTTAAAGCAACATCCAGTACAGATGGTGATTT CCGATTATCGGATGCCGGGCATGAATGGTGCGGATTTGGTGATAGAGATTAATCGCCGCTATCCGCACATTATGTCGCTT ATCCTCTCTGGGCAGGCGGATATGAATGGATTATCGCGAGCCTTGAATGAAGGCGATCTGTACAAATTTTTGCTCAAGCC TTGGGAGCGAAATTATCTGCTGCAAACAATCTTGCAGTGTTTTAGTGAAAAAGAGCGCCGTGAAGAGTTTGATACCGTTT CCGGACTCAAAACATGGCAAGCACTCAACAAACAGATCTCATTATTACAGTCACTGGCTGACCACCCCTATCTTGTGCTG ATCATGGAGTGGACGGCGCCGCTGGAGGACCTGCAAAAACAAGCCATTTCGCAACATGTGATCCAGCAACTTCCAGAAAC TGAGCACATCTATCAAGATGGAGCACGTTGGTTTTGGGTTACTCACCGCTTAACGCCTTGGTATCAAACATTATTTAAGT TAATTGATAGCTTTCAGAACCCAGCACCTTCAGATAATGCGGCCTTTGATATTGCTCAGCCGCCGCATTGGTGGATTGCC GATATTGAGTCTTGGCCTGATGTTGAGTTGAAGTTAGTCAATCCGCCATGTGAGAAAAGCGCGTTGGTTGATCATTTCCC TATCTTTGGGTTGGGCAATGTGGACGAGACGCTGGAAATTAAACAGCTATTGAATATTTATCGTGACCTCCAACTCGGCC ATTTTTGTGCCTTCTATCAGCCTCAAAAGCACATCGATTCTGGGGGCGTCGTAGCGTTTGAAGCCTTAGCCAGACGAGTG ATTGGCAAAGGATTGTATGAAATGCCCGATCGTTTTTTCCCGATCTTGGAAAAGTACCATTTGATCCCGACGTTAACTGA AGTCATGGTGCGCGACATTTTGACCTTTTTAATGACGGAAGATGCGGTCTTACAAGACATCACCATAGGGGTAAATATTC CGGGAAAAATGCTCACTGACGGCAGTTTTTATCGTTTGTTACTGAGCGTCGCGGAGGAGAAGCAAGCACAACATGCGTTG CATCGACTCTCTGTTGAGATCACGGAACACGATTTGATTGCGGATTTTGATGCCGCTAAACATGAGATTTATAAGCTAAA ATCATTAGGAATACGCTGCGCGTTAGATGATTTTGGTACGGGATATTCTGGTTATGAGTACTTGTGTGAAATTCCGTTTG ATGTAGTGAAAATTGATGGGCGATACATTCAAAGTTTGGGCAAGGCGGAATCAAGTACGGTCATTTTACAATCGATGATT TCTAGCATTAAATCCTTGTCTATGCAGGTGATTGCAGAATGGGTCGACTCAGATCAGCAATATCAAATTTTACAAGAGAT GGGATGTGACCTGGTGCAAGGTTATTTAGTTAGCCCGGCTATTTCACCACAACAAGTCCTGAACTATCTCCATAACAAAC TATCTCCATAA
Upstream 100 bases:
>100_bases AAGAACACCATGGCAAAATAAAGCTCTGTTCGACAGAAGGGGTCGGAACGCGAGTCTTTGTGACACTGCCACAAGCGGTG CGTGCTCAAGGAGCCTTCTG
Downstream 100 bases:
>100_bases AAAATAGGGGAGCGCTATGCAAATGGATAACATGCACGATGAGAAGTTAAACGTCCTGTTACTTGATGATGAAAACGATA TTTTGAAAGCGCTTAACCGT
Product: diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>536_residues MQSNREILLVDDEPAVLNALKRELRPYFPHLHTATCAQEALELLKQHPVQMVISDYRMPGMNGADLVIEINRRYPHIMSL ILSGQADMNGLSRALNEGDLYKFLLKPWERNYLLQTILQCFSEKERREEFDTVSGLKTWQALNKQISLLQSLADHPYLVL IMEWTAPLEDLQKQAISQHVIQQLPETEHIYQDGARWFWVTHRLTPWYQTLFKLIDSFQNPAPSDNAAFDIAQPPHWWIA DIESWPDVELKLVNPPCEKSALVDHFPIFGLGNVDETLEIKQLLNIYRDLQLGHFCAFYQPQKHIDSGGVVAFEALARRV IGKGLYEMPDRFFPILEKYHLIPTLTEVMVRDILTFLMTEDAVLQDITIGVNIPGKMLTDGSFYRLLLSVAEEKQAQHAL HRLSVEITEHDLIADFDAAKHEIYKLKSLGIRCALDDFGTGYSGYEYLCEIPFDVVKIDGRYIQSLGKAESSTVILQSMI SSIKSLSMQVIAEWVDSDQQYQILQEMGCDLVQGYLVSPAISPQQVLNYLHNKLSP
Sequences:
NA
Specific function: NA
COG id: COG0784
COG function: function code T; FOG: CheY-like receiver
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA