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Identifier: 229607563

GI number:

Start: 1593870

End: 1597343

Strand: Reverse

Name: Not Available

Synonym: VCD_002475

Alternate gene names: NA

Gene position: NA

Preceding gene: 229607564

Following gene: 229607562

Centisome position: NA

GC content: NA

Gene sequence:

>3474_bases
GTGACTATGACTACACACTCTTTACTCTCTCTGTTTTCGGCGCAAGGTGCCGGAGACAAAAAAGCCATCGGTAATTTACA
CGGCGCAAGTTTAGCGCTGGCCATTGCGGAACTCGCCAATGCTCATACGAGCCATACGTTGCTCGCCGTGCCCGATCCAC
AAACCGCGCTCAAATTGCTACACGAAGTGGAACAGTTTAGCCACAGCGAAGTGGCGCTCTTCCCCGATTGGGAAACGCTG
CCCTACGATAATTTTTCACCCCATCAGGACATCATTTCTGATCGTATTTCGCGTTTGTATCAGCTCCCAAGCTTAACGCG
CGGTATCACGATTGTCCCGGTCAGTACCTTGCTTCAGCGCCAGTCACCACGTGACTTTTTGTTGCAGCACACCTTAATTG
TTAAACGTGGCGATCACTTTTCACTGGATAAACTGCGCTTGCAGTTAGAAAACAGCAGCTATCGCCATGTCGATCAGGTC
TTTGGCCCCGGTGAATACGCCAGTCGCGGGTCGATTCTTGATCTCTTCCCTATGGGCAGTAGCGACCCATTCCGGATCGA
TTTCTTTGATGATGAAATCGACACCATTCGCACCTTTGATCCAGACAATCAGCGCTCAATCGCTGAAATGGATGAAATTC
GCCTGCTGCCCGCCCATGAGTTTCCGACGACGGCCGCGGCGATCGAAGAGTTTCGTAACCGCTGGCGACAGCGTTTTGAA
GCGCGCCGCGAGCCGGAATCGGTTTACAGCCAAGTCTCTAAAGGCACTTGGCCGGCAGGGATTGAGTATTGGCAGCCACT
CTTTTTTGAGCACAGCGAGACTCTGTTTGATTACCTGCCCGCCAACAGCCAGCTTTTGGTGGTTGGCGAGCTGGAAAAAG
CCATCGACCAGTTCTTAACTGATGTCGATTACCGCTACGACCAACGCAATATCGACCCACTGCGCCCACTGCTGCCGCCC
AATGAGTTGTGGCTGCGTAAAGATGAGCTGTTTGCCCACTTTAAAACTCTGCCGCAAGTCCAACTGACAAGCTCACCTAT
CGAGCTGCGTGCCGGTCGAATGAATGCGCAAGTTCAACCACTACCCGTATTGGCCGTTGAACATCAAAACAAAGAGCCTT
TGGCGGCACTGCGCCAATTTAGCGAACAATTTACCGGCAAAATCATTTTCTCAGTCGAGTCGGAAGGTCGCCGTGAAGCG
CTACTGGAGTTGTTACAGCGCATTAAACTGCGCCCGCAAAGCCAAAATGATTTCAGCCTTGCGTGCCAACAAACGGAAAA
ATACTCACTGGTGCTCGGCTCAGCAGAGCGCGGATTTATCTATGGTGATAATCAAGTTGCCTTGATTTGTGAGAGCGATT
TACTGGGCGATCGGGTGATTCAACGTCGCCGCAAAAAAGATCGCAAAAACGTCACCAACAGTGATGCGGTAATCCGCAAC
CTTGCCGAGCTCAAACCGGGGCAACCCGTTGTCCATATTGATCACGGGATCGGACGTTACTTAGGCTTACAAACCCTTGA
AGCGGGTGGCATGGTCAGCGAATACGTGATGCTGGAGTACCAAAACGAAGCCAAGCTGTATGTGCCGGTTTCGTCACTGA
ACCTGATCAGCCGCTACTCCGGTGGCGCAGAAGAAGCCGCCCAATTGCATAAATTAGGGGGTGAAGCGTGGGTCAAAGCG
CGCCGCAAAGCGGCGGAAAAAGTGCGCGATGTCGCGGCAGAACTTTTGGATGTGTATGCCAAGCGTGAAATCAAACCGGG
CTTTAAATTTCATCTCGACCGTGAACAATACGCGACCTTCAAAGCCACCTTCCCGTTTGAAGAAACCGATGACCAAGCAA
TGGCGATCAACGCCGTGCTATCCGACATGTGTCAAGCCAAAGCCATGGATCGTTTGGTGTGTGGTGACGTCGGCTTTGGA
AAAACAGAAGTAGCGATGCGCGCCGCGTTTGTCGCGACCGATAACGGCAAGCAAGTCGCCGTATTAGTTCCAACTACGCT
GCTCGCCCAGCAGCATTTTGAAAACTTCCGCGACCGCTTTGCTAACTTGCCGATCCGCGTCGAAGTGCTCTCCCGCTTTA
AATCAGCCAAAGAGCAAAAACAAATCCTACAAGACGTAGCGGACGGCAAAGTCGACATTCTGGTCGGTACCCATAAGTTG
CTCTCTAGCGAAATTCGTTTTGCGGATCTTGGCTTGCTGATTGTTGACGAAGAACACCGTTTCGGAGTGCGCCAAAAAGA
AAAAGTCAAAGCGATGCGTGCCGATGTGGATATTCTGACTCTCACTGCCACGCCAATCCCACGTACACTCAACATGGCCA
TGAGTGGTATGCGTGACCTGTCGATTATTGCCACACCTCCAGCGCGCCGTTTAGCCATCAAAACCTTTGTTCGTCAAAGT
GAAGATAGTGTGATCCGTGAAGCGGTACTGCGTGAAATTATGCGCGGTGGTCAGGTGTACTTTCTGCATAATCAGGTTGA
AACCATCGATAAAGTGGCCGCAGATTTAGAAAAACTGGTGCCTGAAGCGCGGATTACCGTCGCTCACGGGCAGATGCGTG
AACGTGAGCTGGAAAAAGTGATGAACGATTTCTACCACCAGCGTTTCAATTTGCTGGTGTGTACCACGATCATCGAAACC
GGTATCGACGTTCCGACCGCGAATACCATCATCATGGATCGCGCTGACAGCTTAGGTTTAGCCCAGTTGCACCAGTTACG
TGGCCGCGTCGGTCGTTCGCATCACCAAGCCTATGCTTACCTGTTAACGCCACCGCCTAAAGCGATTACCAAAGATGCGG
TCAAACGCCTAGAGGCGATTGCCTCTTTAGAAGATTTGGGGGCCGGCTTTACTCTCGCCACGCACGACCTAGAAATTCGC
GGGGCCGGTGAATTGTTAGGCGAAGAGCAAAGTGGCCAGATTCAGTCGGTCGGTTTTACTCTGTATATGGAAATGCTCGA
ACAAGCGGTCGAAGCCCTAAAATCAGGCAAAGAACCTGCGCTGGATGATTTACTGCGTGAGCAGACCGAAGTCGAAATGC
GCCTACCAGCCTTGCTGCCGGAAGAGTACATCCCCGATATCAATACGCGGTTATCCATGTACAAACAGATCGCCAGCGTA
GCGAGTAAAGACGAATTGGCTGAACTCAAAGTCGAATTGATTGATCGCTTTGGTAAATTACCAGACGCCGCGTTAAACTT
ACTCGCCATTGCTGAACTGAAACTCAATGCTATGCGCCTAAAAGTGCGTAAAATTGAGGCGCATGAGCGTGGCGGATACG
TAGAGTTCTATCCCAATGCTGACATTAACCCGGTGTTTTTGGTTAAACTGCTGCAATCGCAACCAAAGTTACTGGCGATG
GATGGGCCAACCAAATTGAAATTTACCTTGCCTTTGGTTGAACGCAGTGCGCGCATTCAATTTGTCGCTGACATGTTGAA
GAATTTCCAGCAAAATGTACTACCTGCTCGGTAA

Upstream 100 bases:

>100_bases
TGCTGCGCGATGTGGATCAAGATTTGCTGATCAAAGCCGCTCTCTACCAACAGCAGCGCCTGCTGCGTCAACGCTCACTA
GACCGAGAAAAACCTCAAGC

Downstream 100 bases:

>100_bases
GATTCTCAAATTGATAGGACAGGTAAGCGGCAAATCAGTACGCCTTTAATCGCGAGATAACACTAAGATTAGGGCGAATG
AACTAAGCCAATCTCTTCGC

Product: transcription-repair coupling factor

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1157_residues
MTMTTHSLLSLFSAQGAGDKKAIGNLHGASLALAIAELANAHTSHTLLAVPDPQTALKLLHEVEQFSHSEVALFPDWETL
PYDNFSPHQDIISDRISRLYQLPSLTRGITIVPVSTLLQRQSPRDFLLQHTLIVKRGDHFSLDKLRLQLENSSYRHVDQV
FGPGEYASRGSILDLFPMGSSDPFRIDFFDDEIDTIRTFDPDNQRSIAEMDEIRLLPAHEFPTTAAAIEEFRNRWRQRFE
ARREPESVYSQVSKGTWPAGIEYWQPLFFEHSETLFDYLPANSQLLVVGELEKAIDQFLTDVDYRYDQRNIDPLRPLLPP
NELWLRKDELFAHFKTLPQVQLTSSPIELRAGRMNAQVQPLPVLAVEHQNKEPLAALRQFSEQFTGKIIFSVESEGRREA
LLELLQRIKLRPQSQNDFSLACQQTEKYSLVLGSAERGFIYGDNQVALICESDLLGDRVIQRRRKKDRKNVTNSDAVIRN
LAELKPGQPVVHIDHGIGRYLGLQTLEAGGMVSEYVMLEYQNEAKLYVPVSSLNLISRYSGGAEEAAQLHKLGGEAWVKA
RRKAAEKVRDVAAELLDVYAKREIKPGFKFHLDREQYATFKATFPFEETDDQAMAINAVLSDMCQAKAMDRLVCGDVGFG
KTEVAMRAAFVATDNGKQVAVLVPTTLLAQQHFENFRDRFANLPIRVEVLSRFKSAKEQKQILQDVADGKVDILVGTHKL
LSSEIRFADLGLLIVDEEHRFGVRQKEKVKAMRADVDILTLTATPIPRTLNMAMSGMRDLSIIATPPARRLAIKTFVRQS
EDSVIREAVLREIMRGGQVYFLHNQVETIDKVAADLEKLVPEARITVAHGQMRERELEKVMNDFYHQRFNLLVCTTIIET
GIDVPTANTIIMDRADSLGLAQLHQLRGRVGRSHHQAYAYLLTPPPKAITKDAVKRLEAIASLEDLGAGFTLATHDLEIR
GAGELLGEEQSGQIQSVGFTLYMEMLEQAVEALKSGKEPALDDLLREQTEVEMRLPALLPEEYIPDINTRLSMYKQIASV
ASKDELAELKVELIDRFGKLPDAALNLLAIAELKLNAMRLKVRKIEAHERGGYVEFYPNADINPVFLVKLLQSQPKLLAM
DGPTKLKFTLPLVERSARIQFVADMLKNFQQNVLPAR

Sequences:
NA

Specific function: NA

COG id: COG1197

COG function: function code LK; Transcription-repair coupling factor (superfamily II helicase)

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA