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The map label for this gene is rpoB

Identifier: 229606391

GI number:

Start: 295842

End: 299867

Strand: Reverse

Name: rpoB

Synonym: VCD_001296

Alternate gene names: NA

Gene position: NA

Preceding gene: 229606392

Following gene: 229606390

Centisome position: NA

GC content: NA

Gene sequence:

>4026_bases
ATGGTTTACTCTTATACCGAGAAAAAGCGCATCCGTAAGGACTTTGGTACTCGTCCACAAGTGTTGGACATTCCATACCT
GCTATCGATCCAGCTCGATTCGTTCGAAAAGTTCATCGAACAGGATCCTGAAGGACAATACGGTCTTGAAGCCGCTTTTC
GTTCTGTATTTCCAATTCAGAGCTATAACGGCAATTCAGAGCTGCAATACGTTAGCTACCGTCTTGGTGAGCCAGTTTTT
GACGTTAAAGAATGTCAAATCCGTGGTGTAACTTATTCAAAACCGCTACGCGTGAAATTACGCTTAGTGATCTTTGATAA
AGACGCGCCAGCAGGTACTGTCAAAGATATTAAAGAACAAGAAGTCTACATGGGCGAAATTCCGCTCATGACAGAAAATG
GTACCTTCGTAATCAATGGTACTGAGAGGGTTATCGTATCCCAGCTGCACCGAAGCCCAGGCGTGTTCTTCGACAGCGAT
AAGGGTAAGACCCACTCTTCAGGTAAAGTTCTGTATAACGCACGTATCATTCCGTACCGTGGTTCATGGCTCGATTTTGA
GTTCGATCCAAAAGACAACCTGTACGTACGTATTGACCGTCGTCGTAAGCTGCCTGCATCGATCATCCTGCGTGCACTAG
GTAAAACTAGCGCCGAGATCCTGGACATCTTCTTCGAAAAAGTGAATTTCGAAGTGAAAGATCAAACTCTAATGATGGAG
TTGGTTCCAGAGCGTCTGCGTGGTGAAACTGCGACCTTCGATATCGAAGCGGATGGCAAGGTTTACGTAGAGAAAGGCCG
TCGTGTGACTGCACGTCACATCCGTCAACTTGAAAAAGATGGCGTGAACTTTATTGAAGTTCCGGTTGAGTACATCGTAG
GTAAAGTATCTGCGAAAGATTACGTGAATGAAGCGACTGGCGAACTGATCATTACCGCGAACCAGGAAATCAGCCTGGAA
GCGCTAGCGAACCTGTCTCAAGCCGGTTACAAAAAGCTAGAAGTTCTATTTACCAATGATCTGGACCACGGTCCGTTCAT
GTCAGAAACCCTGCGTGTTGATAGCACGACAGATCGCATCTCTGCACTGGTAGAAATCTACCGCATGATGCGCCCTGGCG
AGCCACCAACGAAAGAAGCCGCGGAATCGCTGTTTGAAAGTCTATTCTTCTCTGCAGAGCGTTACGATCTGTCGACTGTT
GGCCGTATGAAGTTCAACAGCTCAATCGGTCGTGAAGATGCGGAAGAGCAAGGCACGCTGGACGAAGTTGACATCATCGA
AGTGATGAAAAAGCTGATCTCGATTCGTAACGGTAAAGGCGAAGTGGACGATATCGACCACCTTGGCAACCGTCGTATCC
GTAGTGTCGGCGAAATGGCAGAGAACCAATTCCGTGTTGGTCTGGTACGTGTTGAACGCGCAGTGAAAGAACGCCTAAGC
TTGGGCGATCTGGACAACGTGATGCCACAAGACCTGATCAACGCGAAACCAATTTCTGCTGCTGTAAAAGAATTCTTTGG
TTCTTCTCAGCTGTCTCAGTTTATGGATCAGAACAACCCGTTGTCAGAAGTGACGCATAAGCGTCGTATTTCTGCATTGG
GCCCTGGCGGTCTGACTCGTGAGCGTGCTGGCTTCGAAGTACGTGACGTACACGTAACGCACTACGGTCGTCTATGTCCT
ATCGAAACACCTGAAGGTCCAAACATCGGTTTGATCAACTCGCTGTCTGCGTTTGCACGCTGCAACGAGTACGGTTTCCT
AGAAACCCCTTACCGTCGCGTAGTCAACGGTGTTGTGACTGACGAAGTGGATTACCTCTCTGCGATTGAAGAAGGTCAAT
TCGTTATCGCTCAGGCGAACGCTAAGCTGACAGAAGAAGGCGGTTTTGCTGATGAACTGGTTACCGCACGTCAAAAAGGC
GAGTCAGGTCTTCACCCACGTGAACACGTTGACTACATGGACGTTGCGACAAACCAAGTTGTATCGATCGCGGCATCCTT
GATCCCGTTCCTAGAACACGACGATGCGAACCGTGCTTTGATGGGTGCGAACATGCAACGTCAGGCGGTTCCAACTCTGC
GTTCAGAGAAACCACTGGTTGGTACGGGTATCGAGCGTAACGTAGCGGTTGACTCTGGTGTAACAGCGGTGGCGAAACGT
GGCGGTGTTATCCAGTCAGTTGATGCTTCTCGTATCGTAGTCAAAGTGAACGAAGAAGAGTTGATCCCTGGCGAAGCGGG
TATCGACATCTACAACCTGACTAAGTACACCCGTTCGAACCAGAATACTTGTATCAACCAGCGTCCATGTGTGATGCCGG
GTGAACCTGTAGCTCGTGGCGATGTACTGGCAGACGGTCCTTCAACTGACCTTGGCGAACTGGCTCTTGGCCAAAACATG
CGTATCGCATTCATGCCTTGGAACGGTTACAACTTCGAAGACTCGATCTTAGTGTCTGAGCGCGTAGTTCAAGACGACCG
CTTTACTACTATCCACATCCAAGAGCTTTCTTGTGTGGCGCGTGATACTAAGCTGGGCGCAGAAGAGATCACGGCTGACA
TCCCTAACGTGGGTGAAGCGGCTCTGTCTAAGCTTGACGAATCTGGCATCGTGTACATCGGTGCAGAAGTGAAAGGCGGC
GACATTCTGGTTGGTAAAGTGACACCAAAAGGTGAAACTCAACTGACTCCAGAAGAGAAACTGCTGCGTGCGATCTTCGG
TGAGAAAGCCTCAGACGTGAAAGATACGTCTCTGCGTGTACCGAACTCAGTAGCAGGTACGGTTATCGACGTACAAGTCT
TTACTCGCGATGGCGTAGAAAAAGACAAGCGTGCGCTTGAAATCGAACAGATGCAGCTGAAAGAAGCGAAGAAAGACCTG
ACTGAAGAGTTCCAAATTCTGGAAGGCGGTCTTCTGGCGCGTGTTCGTTCTGTACTGCTGGCGGGTGGTTACACTGAAGC
GAAACTGGGTTCAATCGAACGTAAGAAATGGTTAGAGCAGACGCTTGAAAATGAAGAGCTGCAAAACCAGCTAGAGCAAC
TGGCAGAACAGTACGACGAACTGAAAGCAGACTTCGATAAGAAGTTTGAAGCGAAGCGTCGTAAGATCACCCAAGGTGAT
GATCTGGCTCCTGGCGTACTGAAGATTGTTAAGGTTTACCTAGCAGTGAAACGTCGCATCCAGCCGGGTGATAAGATGGC
GGGTCGTCACGGTAACAAGGGTGTTATCTCTAAGATCAACCCTGTTGAAGACATGCCATACGATGAAAACGGTCAGCCGG
TTGACATCGTACTGAACCCACTGGGCGTACCATCACGTATGAACATCGGTCAGATCCTAGAAGTTCACTTGGGTCTGGCG
GCGAAAGGTATCGGTGACAAGATCAACCAAATGATCAAGGAACAACAAGAGCTGGCGAAGCTGCGTGAGTTCCTGCAGAA
GGTTTATGATCTAGGCGATACTCGTCAACGCGTTGATATCTCAGAACTCAGTGATGAAGATGTTCGTACACTGGCGCATA
ACCTGCGTGCTGGTCTACCGGTCGCAACGCCAGTCTTCGATGGTGCTCCTGAATCGTCTATCAAAGCTATGTTGGAACTG
GCGGATCTGCCAGCTTCAGGTCAGTTGACTCTGTTCGATGGCCGCACGGGTGACGCATTTGAGCGCCCTGTTACCGTGGG
TTACATGTACATGCTGAAACTGAACCACTTGGTTGACGACAAGATGCACGCTCGTTCTACAGGCTCTTACAGTCTGGTTA
CTCAGCAACCTCTGGGTGGTAAAGCTCAGTTCGGTGGTCAGCGCTTCGGTGAGATGGAAGTGTGGGCACTGGAAGCATAC
GGTGCTGCGTATACCCTGCAAGAGATGTTGACCGTTAAATCGGACGACGTGAACGGCCGTACTAAGATGTATAAGAACAT
CGTAGATGGCAATCACGCGATGGAACCTGGTATGCCAGAATCGTTCAACGTACTGTTGAAAGAGATTCGCTCGCTGGGTA
TCAACATCGAGCTAGAAGACGAATAA

Upstream 100 bases:

>100_bases
GAATTCACACTACAGTAAACAGCGATTAGTCACTGTCCTCACCCTTTTTAACCTGAAAGGTGGACAGTTTGGGTCACTTA
TCAGCGAGCTGAGGAACCCC

Downstream 100 bases:

>100_bases
TAAACCCTAAGGTTTCCCCGCAAGGGGAAGCCTACCGGTTTCGGTAGGAAGGTGCTCGTTGCCAATCGCAGCGAGTTCCT
TTTAACTCCTTACAGGAGCT

Product: DNA-directed RNA polymerase subunit beta

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1341_residues
MVYSYTEKKRIRKDFGTRPQVLDIPYLLSIQLDSFEKFIEQDPEGQYGLEAAFRSVFPIQSYNGNSELQYVSYRLGEPVF
DVKECQIRGVTYSKPLRVKLRLVIFDKDAPAGTVKDIKEQEVYMGEIPLMTENGTFVINGTERVIVSQLHRSPGVFFDSD
KGKTHSSGKVLYNARIIPYRGSWLDFEFDPKDNLYVRIDRRRKLPASIILRALGKTSAEILDIFFEKVNFEVKDQTLMME
LVPERLRGETATFDIEADGKVYVEKGRRVTARHIRQLEKDGVNFIEVPVEYIVGKVSAKDYVNEATGELIITANQEISLE
ALANLSQAGYKKLEVLFTNDLDHGPFMSETLRVDSTTDRISALVEIYRMMRPGEPPTKEAAESLFESLFFSAERYDLSTV
GRMKFNSSIGREDAEEQGTLDEVDIIEVMKKLISIRNGKGEVDDIDHLGNRRIRSVGEMAENQFRVGLVRVERAVKERLS
LGDLDNVMPQDLINAKPISAAVKEFFGSSQLSQFMDQNNPLSEVTHKRRISALGPGGLTRERAGFEVRDVHVTHYGRLCP
IETPEGPNIGLINSLSAFARCNEYGFLETPYRRVVNGVVTDEVDYLSAIEEGQFVIAQANAKLTEEGGFADELVTARQKG
ESGLHPREHVDYMDVATNQVVSIAASLIPFLEHDDANRALMGANMQRQAVPTLRSEKPLVGTGIERNVAVDSGVTAVAKR
GGVIQSVDASRIVVKVNEEELIPGEAGIDIYNLTKYTRSNQNTCINQRPCVMPGEPVARGDVLADGPSTDLGELALGQNM
RIAFMPWNGYNFEDSILVSERVVQDDRFTTIHIQELSCVARDTKLGAEEITADIPNVGEAALSKLDESGIVYIGAEVKGG
DILVGKVTPKGETQLTPEEKLLRAIFGEKASDVKDTSLRVPNSVAGTVIDVQVFTRDGVEKDKRALEIEQMQLKEAKKDL
TEEFQILEGGLLARVRSVLLAGGYTEAKLGSIERKKWLEQTLENEELQNQLEQLAEQYDELKADFDKKFEAKRRKITQGD
DLAPGVLKIVKVYLAVKRRIQPGDKMAGRHGNKGVISKINPVEDMPYDENGQPVDIVLNPLGVPSRMNIGQILEVHLGLA
AKGIGDKINQMIKEQQELAKLREFLQKVYDLGDTRQRVDISELSDEDVRTLAHNLRAGLPVATPVFDGAPESSIKAMLEL
ADLPASGQLTLFDGRTGDAFERPVTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLGGKAQFGGQRFGEMEVWALEAY
GAAYTLQEMLTVKSDDVNGRTKMYKNIVDGNHAMEPGMPESFNVLLKEIRSLGINIELEDE

Sequences:
NA

Specific function: NA

COG id: COG0085

COG function: function code K; DNA-directed RNA polymerase, beta subunit/140 kD subunit

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA