| Definition | Vibrio cholerae MJ-1236 chromosome 2, complete genome. |
|---|---|
| Accession | NC_012667 |
| Length | 1,086,784 |
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The map label for this gene is malS
Identifier: 229605524
GI number:
Start: 534491
End: 536563
Strand: Reverse
Name: malS
Synonym: VCD_000470
Alternate gene names: NA
Gene position: NA
Preceding gene: 229605526
Following gene: 229605523
Centisome position: NA
GC content: NA
Gene sequence:
>2073_bases ATGAAACTGAATGCCTTGACCCTATCGCTGCTCTCAGCTCTAGCTTTGCCAGCGCTGGCCTCGCCAGCTTCCACTGCGAA TTTAACGGTAGCAACCACCACCAACAGCCGCGATTTTCCACTGCAAGCCGATGAACCACTGGTGATCCCGCTCACTAAGG GCGACTACACCTTGACCATTAGCGGGATTGGCGGTGATTGCCCACCGGTCCCCGAACAAGAGATCAAATTCAACACGCCC ATCGCTCTCAATTGCCATGTCCCGACTCAGTTACCTTTGAGTATCCGTTTTACCGGGGATTACGCATTTCAGTGGCAAGC GCAAAACAATACTCTCACCTTCGTGCGTCAAACCACTAAGGCAGCCAAAACTGAGTTTCATCGCCCGATCCCAAACGTCA GTTGCGAAGTGTATCAAGGCGGTGAAGTGACTTTAGATCTGGCGAGCAGCTTTGCCGATGGAACCGAGTTGCAAGATGCT ATGACTGGGCAAGTAGTGACCATCGAGCAAGGCAAAGTGCGCTTAACCCCTTCCGCTAACAGCGGCGGCTTGGTGTTGTT GGAACCTAAACAGACAGCAAAAGCCGAGCCCAAACAGCCCTTTACCTATCGAAATGCCAATATTTATTTTGTGATGGTTG ATCGCTTCTACAACGCAGACCCAAGCAATGATGGCAGTTATGGTCGTCACAAAGATGGCCAAGAGGAGATCGGAACATTT CATGGCGGCGATCTCAAGGGTGTGATTGCAAAACTTGACCATATCCAAAGCTTAGGCACAGATGCTATCTGGCTCTCTCC GATTGTCGAACAGGTACATGGGTTTGTCGGCGGTGGCGAGAAAGGATCATTCCCGTTTTATGCCTATCACGGCTATTGGA CCCGCGATTTCACCAAGATCGATGCCAACTTTGGGAAAGATGAGGATTTACAAACCTTAGTGCGTGAGGCGCATCGTCGC GGCATTAAAATTTTGATGGATGCGGTGATCAATCATGCAGGTTACGCGACACTCGCCGATTTACAGCAAGATGCAGTACA AGTGGTGAACGCACCTATGCTGCCTGAACGTTGGAATGACTGGAAACCCAGCGCCGACGAAAACTGGCACAGCTTCCATC AAGCCATTGATTACCAAAGCAAGAATTGGCAACAGTGGTGGGGGCCAGACTGGGTACGCGCAGGCTTACCGGGCTATCCT GCGCCGGGCAGCAGTGACATCACGATGAATCTCGCCGGTTTACCGGATTTTCGCACTGAATCCCCCCAAGCCGTTACCCC GCCGCAGTGGCTACTCAACAATCCCGGCACACGAGTGGTGAGCAAACCCAATTACACTGTCGCTGACTATTTAATTGAAT GGCAAAGCGATTGGGTACGCCGCTTTGGGATCGACGGTTTTCGCATCGACACCGTCAAACATGTGGAAGGGGAAGTGTGG CAACGCTTAAAACAGCGCGCGACGGAAAGCCTTGCAGCGTGGCGTAAAGACAATAATCAAAGCGGTGAGCCGTTTTGGAT GATGGGCGAAGTGTGGGGGCACGGTGCCTATCGCAGCCCCTACTTTGATGATGGCTTTGATGCATTGATTAACTTTGACA TTCAAAAACGTATGGATAACGGCGCAGCCTGTTTGAGCCAGATGGCGATGGTGTATCGCGATTACGCGCAAACCCTCGCC AAATATCCCGACTTTAACCCCGTCAGTTATATGTCCTCGCACGATACTGAGTTGTTTTTCGGGCGCTTTAAATCACTGGA TATGCAACGTAACGCCGCCAATGCCCTGCTACTGACACCGGGTGCTATCCAAGTGTATTACGGCGATGAAGTCGCCCGCG AAGCGGGACCGTACGCAGACGATTTCCATCAAGGCACTCGCTCTGATATGCCTTGGGAATGGAATGCCGAACGCCAAGCA CTGCTCAAGCATTGGCAAACCTTAGGTCAATTCCGTCAACGTCACCCTGCGATAGGAACGGGAGAGCATCGCGAAATCGC CCAATCTAACGCTTATGTTTTCACTCGCACATTGGGTGAAGATAAGGTGGTCGTGGCGTTCGTTGGCCGCTAA
Upstream 100 bases:
>100_bases AGAATGATGTTGAGTGACGCGGTGCAATTTATCCTTTATCGATACAAAAATCGGCGCCATTTGGGTAGGAAAGCCGAATC AATAATAAGAAGGATAGACA
Downstream 100 bases:
>100_bases GCCACTCCATCAGGAGCATACACAGTATGCTCCTGAATTTGTCGAAATTCGTGGCGATGTCCCCTCCTCAAAAGCACTCA AAAATCATCCTTTGGTTGTA
Product: periplasmic alpha-amylase precursor
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>690_residues MKLNALTLSLLSALALPALASPASTANLTVATTTNSRDFPLQADEPLVIPLTKGDYTLTISGIGGDCPPVPEQEIKFNTP IALNCHVPTQLPLSIRFTGDYAFQWQAQNNTLTFVRQTTKAAKTEFHRPIPNVSCEVYQGGEVTLDLASSFADGTELQDA MTGQVVTIEQGKVRLTPSANSGGLVLLEPKQTAKAEPKQPFTYRNANIYFVMVDRFYNADPSNDGSYGRHKDGQEEIGTF HGGDLKGVIAKLDHIQSLGTDAIWLSPIVEQVHGFVGGGEKGSFPFYAYHGYWTRDFTKIDANFGKDEDLQTLVREAHRR GIKILMDAVINHAGYATLADLQQDAVQVVNAPMLPERWNDWKPSADENWHSFHQAIDYQSKNWQQWWGPDWVRAGLPGYP APGSSDITMNLAGLPDFRTESPQAVTPPQWLLNNPGTRVVSKPNYTVADYLIEWQSDWVRRFGIDGFRIDTVKHVEGEVW QRLKQRATESLAAWRKDNNQSGEPFWMMGEVWGHGAYRSPYFDDGFDALINFDIQKRMDNGAACLSQMAMVYRDYAQTLA KYPDFNPVSYMSSHDTELFFGRFKSLDMQRNAANALLLTPGAIQVYYGDEVAREAGPYADDFHQGTRSDMPWEWNAERQA LLKHWQTLGQFRQRHPAIGTGEHREIAQSNAYVFTRTLGEDKVVVAFVGR
Sequences:
NA
Specific function: NA
COG id: COG0366
COG function: function code G; Glycosidases
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA