| Definition | Pseudomonas fluorescens SBW25 chromosome, complete genome. |
|---|---|
| Accession | NC_012660 |
| Length | 6,722,539 |
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Identifier: 229591738
GI number:
Start: 4765203
End: 4770071
Strand: Reverse
Name: Not Available
Synonym: PFLU4319
Alternate gene names: NA
Gene position: NA
Preceding gene: 229591743
Following gene: 229591736
Centisome position: NA
GC content: NA
Gene sequence:
>4869_bases TTGAGCCCGTTGATAAGGTCTGGCGAAATACCCGCCATACGGACGATTGCTATGCCTGCAGTGACCCCTGCCACTCCCCA ACCCTTGAGCCCCGAGATGAAGCTGGCGGCTCTTTTACAACTGACCGGCGACTTGGACAAAGCCGACGTACTGCACCAAA AAATACCGAGCTGGATGTACAAGGCTAAACCTCAGGTATTGGCGCAAATGGAGGATAACTTTAAGAGCGCTGGCCCTTAT GACGACAAGGTCAGAAGGATTTTTGCCCGGCTGAAAAGCCTGAAGCGGTTTTGTGTCGAGACGTTGACCGCTGCGTTGTT GTCCGAGTACGGCGTGTCACTGAATGTCGAGTCTGACGAGTTGTGGATCAAGCGAGCCCATGTGAAGGTGGATGCGATCT TGCCGCATCCCCAACGCTACGTGACCTACAGCGTGGAAAAACAGACGCTGCTCGAGGCAGCCATGCGCAACTTCTCGGAG GACGAGACGCGTACGGTGGTGCTTGCGCCCAATGCCAATATTCATCAAGGCGGTACCCCGACGGTTGTCGTTGATATCAG CGCGGCAGGTTTTGTGCGGTTTTGCCGGAAGTTGAACCTGGGCGATCGTTACCAGAAACACCTGAAAGCGTCGATCAACC TGTTGACGCCCCAGGCGCAGGAGTCGGTGTACAACCCGGATGCGACTGATATCAAGCGCTTGAAAGTGCATGAAATGCGC ACCGACGTTTTTATCGCCTACTCCCAGGGCGTCATCGGTGTCGAGGCTTATGGCATGTTGCTGGCGCTGACCCACAATGG CGAAGACATCACGCGCGAGCAGGTGGAGGCCGTGCGTTACCGCGACACGCCGCTGGTTTGGCAGGGTTTGAAAATACTCG ACGCCTGCATTTGGGGCGTCGTGGTTTTTTCCGCTGAACCGATCGACAAACACCCCCAAACCCCCTGCGTCGTCTACATG CCCGGAGACCTGTACCGGCCCCTCTATGAATACACGAGCTTTGAGGCTTTTCAGACCTACTTGTCCGATACCTTGAAAGT GCAAGCCTATGCCCAATCGTTCTCTCGTTATCTCGACGAAGAGATCCGGCTGGATTTTTACAAGGAACTTTCCAGCCGTT CGTCATTGGGCGTGATCGATGCATGCCCGATGACCAAGGGGCTGTTTCAGTTCTTTTTCGAGAGCTTGATCGGCAAGATG CAGAAAGACGCACGGATACTCGCCGTGCCGACCGAGGACATTGACGAGCAGGCGCGTGAAGAGCGGCGCCTGGGTTACTT GAGCACCGGGTTGACCATCGCCAATATCGCCGGCCTTTTCGTCCCGGTGATAGGCCAGTTGATGATGGGAGTGGCGATCG GGCAAATGCTCGGTGAAGTCTACGACGGCGTGGAGGACTGGCAGCACAAGGATAAGGTGCGGGCATTTGAACACTTGCGC GCTGTGGTGGACAGCCTCGCGGACATGGTGTTGTTTTCCGCCGGTGTGTCAGTCGGGGGTGCCGTTAAACGCAGTTTTAC CCGCAGCCTGGAATTCTTCGACAGTTTTGAGGCCGTGCAGAGCGTCAATGGTCAGCGCCGTCTGTGGCGGTCGACCCTGA TGCCTTACCAGCATCCCATGAGGATCGGTTCCGAACAGTTGTCCGACGCCGAGGTCGTGTACAACGTGGATGGGCTGTCC TTCATCAAGCACACCGGGCAGACGTACCGGGTGGCATTTGATCCCGAGATAGACAGTTGGCGCATCCGACATCCGGTGCG CAGCGATGCCTTTGCCCCCCCGGTGGAGCACAACGGAGCGGGTGGTTGGAAACATATCTACGAGCGTCCCGAGGACTGGG GCGCGTTGTACACCCTCGGGCGCTTGGAGCCGCGTATTGAGGCCGTCGAGCCGCGACGCCTGGAGCAGGCGTTGATTGCA ACCGGTACCGAGGTCGAGCCGCTGCGCCAACTGGCCGGACGCAATCTGCGGTTGCCGGCCAGTTTCAACGATTGCGCGGA ACGCTTCCGCCTGGATCACACGATCAGCGAACTGATTACCCAGTTGGAAAGTCGCAGCACCGCCACCGTTGCCAGCGATG AACTGCAGCTCAAGGCGTTGCCCCTGATGCGTGAGTGGCCAGAGGGGCGCTATATCAAAGTGTTGGATGACACCACAAAC GAGGTCGTCAGGTACCCCGCCGAAGCCCGGGTGGATGAAACCCTCAGCATTCACGTCGCACGGGATCAGTTGGGCACGGG CAACCTGCTGCGTACCGTGGTCGATGGCTTGTCTGCGCAGGAACTGGACACATTGCTGGGCAACGGAGTGACGGGTGACA AGTCGCGGCTCCTGGCCGCACGCTTGGCACGGTCGCTCAAAGCCAACCGGCAACCCCTGTTTAACCGGCTCTATCAGGAA TACGACCAGCCTGTCGGCGGCTGGCAGGCCCTGCTGGCGGAACAGGTGCCGGGCTTGCCGGTACGGGTCGCCCAGGCGTT GATCGAAAACGCCTCCAGTGTCGATCGCAGCTATTTGCGCTATTCCCGCAAGGTCCCCCTGAGCCTTTCGCAGGCGGCGA AGGAGGCCCAGGCCGGCATCCGCCTTGACCGCATCAATACCAGCTTTTATCTGCCGGCGCTGGCCGATGCGCAGACATGG CGCTTATCCACGCAATTATTGCCGCATATGCCCGGCTGGCCGGCCAAGGGGGCCGTACAGTTGCGAGAAGGCTCGCTCAA AGGTCCGTTGCTTGCCAGCGCAGAGGCGCCAGGCGCAGAGCCGGGTAACGTAGTCGTGCAGACCGGTACCCACTTTCAGG CGTATGGCGTCGCAGGCCAGAAACTCGGCGAGGGAGGCGAGGGGGGCGCCGGTTTCTACCAGGCCCTGCTGCAGGCCATG CCTGCCGAACAGCGCGCGGCATTGGGCGTGAGCGTGCCCAGCGGGGTAAACGCCGAATTGTTGCGCTATCGGCTATTTGA CGTTTCCAGTACCCGACGCGCGGACGCCCTGTGGGCGTTTGAAGGCAAGCCACGGCGCTTGGTACCGAGCTGCGTGCAGG CCGATTCACCGCTCATTGGGACGGCCATCCACTACACCCGTAGCATGGTGCGCAAGGTCCGAAAGCTCTACCCCGAGTTC ACCGACCGACAGGTCGATGAGTTTCTAAAAGGGCTGGGAAATACGGATCTGGAACGGGCCCGAGCCCTTGAGCAACGCCA TCGGCAAAAGGCAATACTGGATCGCACACTCAAGGATTGGGTCAGTGAGGAGGTGACCGTCCCGCGCCAGGGCGGGTCCC CCCATGACTATCGCCAAAGCCGGCAACAGGTCGCTGATCGGCTGCGCGATTGTTGGAGCCAGATGACTCGGGCGAAAAGC TATCGGCAGATTTCGTACCCGGGGCTGGTGCTTGACGACATGCGCGTGGGGCGTTTGCCGATATGGCCGGCTGATATGGC ATTCGACCATGTGCAGATTCTGTCCCTGCGCAACATGGCCCTGGAGTCTGATGTGGCCTACTTTCTCAAAGCCTTCAAAA GCGTGCGGGAGCTACGGCTCGATGGTAGCCAGATACGTTGGTTGCCGGAGGTGTTGTCCCATATGCCGAAGCTGGAGTCG TTGAGCCTGGCCAATAATCGGATCAATCTTTCCGGCCAGGCGGCGCTCAAGTTGGCAGCCATGAGCAACCTGCACACCTT GAACCTGGCAAAAAACCCGTTAGGCGAAACCCCGGATGTGAGCGCCATGAAGCAATTGCGTAAGCTGAACCTGAGCGAAA CACGGGCCCGAGAGCTGCCCTCTGGGTTGCTGACGCGCCTGCATTTAGAAAGCGCCATGCTGGAGGGCAACGATATCGTC GAGCTGCCCGAGGCGCTGTTCAGTGCCCCGATTGCGGTCACCGAAAAAATTCACCTGTCGCATAACCCCGTCTCCTCGCG CAGCCTGGCAAAACTCAAGGCGTACCAGCAGCGCACGGGAGTGGGAATGGGCCTGATGGACGACGAGATCGGCATGCTCA GCGAACAGTTCGCCAGGGAAGCGCTGGTGCAAGGTGATTCAGCCGCGACCTATTTGCAGCGCCAGGACACGTGGCAAAAG TTGCGAGACGAATGGAATTCCGAAGCGTTCTTCAGCGTGATACGCCAGATGACCCGCTCCAATGAATTCCGGCAGGTGCC GGTCGAATTGCGACGCCGGGTCTGGGGGGTACTGGATGCCGCGGCAAAGGACCATAAACTGCGCGATTTTCTGTTCAGCC TTCCAGAGGGGCTGCCCAATTGCATCGATGGCGCGGCCTACTGTTTCAGTGAGATGGAGGTCGCCGTGTTGCTTGACCAG GCCGTGGGCGAGGCGGGTCTGATCCAGCCCGATCAGCTCGATGTGGCGACACAGTTGAAACTGGGGCGCCAGCTGTTTCG CATGGCGCAGTTGGACATGATTTCCGACGACTACAGCCTGCGCAATAAAGTGATCGACAAACTGCAGGTTCGGCTGGTGT ACCGCAGTCGGCTGGCCGAGACGCTGGATTTGCCTGGGCAGTCCTCCAACATTGCCTATCAGCACGTGGGTGGTGTCAGC GATGAAGATATCCAGGAGGCGGTGCAGCAAGTCACCACACGGGAGATGTCATCGAGCCTGGCCACATTTATTGCGGACCA GAGCTACTGGCTGGAGTACTTGAGACGCCAATACGTCACCGAGTTCCAGGCCGTCGAAGACCGCTTCAGCACGCGCCTGG ATACGCTTTCGGTGAATGACGACAGCTACCTTGATGACACCGTTGCGTTACAGGTTGAACGCAGGGCGTCGCTGGATAGC TTGGCGAACAGCTTGACGCAGGATGCCCTGGAGACCGTCGAGCGACTTGCCCAGGCGTGCAGTGTGTAA
Upstream 100 bases:
>100_bases GTGGTGGATGGGAGTTTTAGAACGATCGGTTATAAGGCGATTGGGCATCAGTGCGCTAATGAGCCAAGGGAGGGGTGTTA GATAGCTAGGCGCAATAGCC
Downstream 100 bases:
>100_bases AACCCTCAGGACGTGCCCCGGATCAATCCCCGCAGGGCAAAACGGTTGGGGTGGCAGGCGTGGGCGACGCTGGAGGGGAC GGGCAGCGGTTCGTCATTCA
Product: putative leucine rich-repeat protein
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>1622_residues MSPLIRSGEIPAIRTIAMPAVTPATPQPLSPEMKLAALLQLTGDLDKADVLHQKIPSWMYKAKPQVLAQMEDNFKSAGPY DDKVRRIFARLKSLKRFCVETLTAALLSEYGVSLNVESDELWIKRAHVKVDAILPHPQRYVTYSVEKQTLLEAAMRNFSE DETRTVVLAPNANIHQGGTPTVVVDISAAGFVRFCRKLNLGDRYQKHLKASINLLTPQAQESVYNPDATDIKRLKVHEMR TDVFIAYSQGVIGVEAYGMLLALTHNGEDITREQVEAVRYRDTPLVWQGLKILDACIWGVVVFSAEPIDKHPQTPCVVYM PGDLYRPLYEYTSFEAFQTYLSDTLKVQAYAQSFSRYLDEEIRLDFYKELSSRSSLGVIDACPMTKGLFQFFFESLIGKM QKDARILAVPTEDIDEQAREERRLGYLSTGLTIANIAGLFVPVIGQLMMGVAIGQMLGEVYDGVEDWQHKDKVRAFEHLR AVVDSLADMVLFSAGVSVGGAVKRSFTRSLEFFDSFEAVQSVNGQRRLWRSTLMPYQHPMRIGSEQLSDAEVVYNVDGLS FIKHTGQTYRVAFDPEIDSWRIRHPVRSDAFAPPVEHNGAGGWKHIYERPEDWGALYTLGRLEPRIEAVEPRRLEQALIA TGTEVEPLRQLAGRNLRLPASFNDCAERFRLDHTISELITQLESRSTATVASDELQLKALPLMREWPEGRYIKVLDDTTN EVVRYPAEARVDETLSIHVARDQLGTGNLLRTVVDGLSAQELDTLLGNGVTGDKSRLLAARLARSLKANRQPLFNRLYQE YDQPVGGWQALLAEQVPGLPVRVAQALIENASSVDRSYLRYSRKVPLSLSQAAKEAQAGIRLDRINTSFYLPALADAQTW RLSTQLLPHMPGWPAKGAVQLREGSLKGPLLASAEAPGAEPGNVVVQTGTHFQAYGVAGQKLGEGGEGGAGFYQALLQAM PAEQRAALGVSVPSGVNAELLRYRLFDVSSTRRADALWAFEGKPRRLVPSCVQADSPLIGTAIHYTRSMVRKVRKLYPEF TDRQVDEFLKGLGNTDLERARALEQRHRQKAILDRTLKDWVSEEVTVPRQGGSPHDYRQSRQQVADRLRDCWSQMTRAKS YRQISYPGLVLDDMRVGRLPIWPADMAFDHVQILSLRNMALESDVAYFLKAFKSVRELRLDGSQIRWLPEVLSHMPKLES LSLANNRINLSGQAALKLAAMSNLHTLNLAKNPLGETPDVSAMKQLRKLNLSETRARELPSGLLTRLHLESAMLEGNDIV ELPEALFSAPIAVTEKIHLSHNPVSSRSLAKLKAYQQRTGVGMGLMDDEIGMLSEQFAREALVQGDSAATYLQRQDTWQK LRDEWNSEAFFSVIRQMTRSNEFRQVPVELRRRVWGVLDAAAKDHKLRDFLFSLPEGLPNCIDGAAYCFSEMEVAVLLDQ AVGEAGLIQPDQLDVATQLKLGRQLFRMAQLDMISDDYSLRNKVIDKLQVRLVYRSRLAETLDLPGQSSNIAYQHVGGVS DEDIQEAVQQVTTREMSSSLATFIADQSYWLEYLRRQYVTEFQAVEDRFSTRLDTLSVNDDSYLDDTVALQVERRASLDS LANSLTQDALETVERLAQACSV
Sequences:
NA
Specific function: NA
COG id: COG4886
COG function: function code S; Leucine-rich repeat (LRR) protein
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA