| Definition | Pseudomonas fluorescens SBW25 chromosome, complete genome. |
|---|---|
| Accession | NC_012660 |
| Length | 6,722,539 |
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Identifier: 229590114
GI number:
Start: 2919093
End: 2921348
Strand: Direct
Name: Not Available
Synonym: PFLU2647
Alternate gene names: NA
Gene position: NA
Preceding gene: 229590113
Following gene: 229590115
Centisome position: NA
GC content: NA
Gene sequence:
>2256_bases ATGTACAAAGACCTGAAGTTCCCCGTCCTTATCGTGCACCGCGATATCAAGGCCGACACCGTCGCCGGTGACCGGGTCCG AGGCATCGCTCGAGAGCTGGAACAGGAGGGCTTCAGTATTTTCTCGGCAGTGGACTACGCCGAGGGCCGGCTGGTGGCCT CCACCCATCATGGCCTGGCGTGCATGCTGATCGCCGCCGAAGGCGCGGGCGAGAATACCCATCTGTTGCAGAACATGGTC GAGCTGATCCGGCTCGCGCGGCTGCGGGCGCCGAATCTGCCGATCTTTGCCTTGGGCGAGCAAGTCACCCTGGAAAATGC GCCGGCTGACGCCATGAGCGAGCTTAACCAGCTGCGCGGCATTCTGTACCTGTTCGAAGACACCGTGCCGTTTCTCGCCC GGCAAGTTGCCCGTGCGGCGCGCACTTACTTGGATGGCCTGTTGCCGCCGTTCTTCAAGGCACTGGTGCAGCACACCGCT GATTCCAACTATTCCTGGCACACCCCCGGCCATGGCGGCGGCGTGGCCTACCGCAAAAGCCCGGTGGGGCAGGCGTTTCA TCAATTTTTCGGGGAAAATACCCTGCGTTCGGACTTATCGGTGTCGGTGCCCGAGCTGGGCTCGCTGCTGGACCACACCG GGCCGCTGGCCGAAGCCGAGGCCCGCGCCGCCCGCAACTTTGGCGCTGACCACACTTTCTTCGTGATCAACGGCACGTCC ACCGCCAACAAGATCGTGTGGCATTCCATGGTCGGGCGCGATGACCTGGTGCTGGTGGACCGCAACTGTCACAAGTCGGT GTTGCACTCGATCATCATGACCGGCGCCATCCCGTTGTACCTGTGCCCGGAGCGCAACGAACTGGGGATCATCGGCCCGA TTCCCTTGAGCGAATTCAGCCCCGAGTCGATCCGCGCCAAGATCGACGCCAGCCCGTTGACCCGTGGCCGGGCGCCCAAG GTCAAGATGGCGGTGGTCACCAATTCCACCTATGACGGCCTGTGCTACAACGCCGAGCTGATCAAGCAGCAATTGGGCAA CAGCGTCGAGGTGCTGCATTTTGATGAGGCCTGGTACGCCTACGCGGCGTTTCATGAATTCTTCGCCGGGCGCTACGGCA TGGGCACTTCGCGCACGCCGGACAGCCCGCTGGTGTTCACCACCCACTCCACCCATAAACTGCTGGCCGCGTTCAGCCAG GCCTCGATGATCCACGTGCAGGACGGCGGCGCGCGTCAGTTGGACCGTGACCGTTTCAACGAAGCCTTCATGATGCATAT CTCGACGTCGCCGCAGTACAGCATCATTGCTTCGCTGGATGTGGCCTCGGCGATGATGGAAGGTCCGGCCGGGCGTTCGC TGTTGCAGGAAATGTTCGACGAAGCCCTGAGCTTCCGTCGGGCGCTGGCCAACCTGCGCCAGCACATTGCCGCCGAGGAT TGGTGGTTCACCATCTGGCAACCGCCGTCGGTGGCGGGCATCGACCGCGTCGTCACCGCTGATTGGCTGTTGCATCCCCA GGCTGACTGGCATGGCTTTGGCGAGGTCGCCGAGGACTACGTGCTGTTGGACCCGATCAAAGTGACGCTGGTGATGCCCG GCCTCAACGCCGGCGGCGCCCTGAGCGATTGCGGGATTCCGGCTGCCGTGGTCAGCAAGTTCCTCTGGGAGCGTGGTCTG GTGGTGGAAAAGACCGGGTTGTATTCCTTCCTCGTGCTGTTCTCCATGGGTATTACCAAAGGCAAATGGAGTACCTTGCT CACCGAATTGCTGGAGTTCAAGCGCAGCTACGACGCCAATGTGAGCCTGGCCAGTTGTTTGCCATCGGTGTTTGCCCAAG GCCCCACGCGCTATCAAGGCCTGGGCCTGCGCGACCTGTGCGACCAACTGCATAGCTGTTACCGTAGCAACGCCACTGCA AAGCACCTTAAACGGATGTATACCGTTCTGCCGGAAATCGCGATGAAACCCGCCGATGCCTACGACCAGTTGGTCAGGGG TGAAGTGGAAGCGGTTTCCATCGATGCCTTGCCAGGGCGCATCGCAGCCGTGATGCTGGTGCCTTATCCGCCCGGTATTC CACTGATCATGCCGGGCGAGCGCTTCACCGAGTCGACGCGTTCGATTATCGACTACCTGGCCTTTGCCCGGACGTTCGAT AGCAGTTTCCCCGGTTTTGTCGCCGATGTTCATGGGTTACAACACGAAGATGACGGCAGTGGTCGTTGTTACACCGTCGA TTGCATCAAGGGTTAA
Upstream 100 bases:
>100_bases CTCCCACCGTTGATCTCCATCTGCCTGCGAAATCTTCATTCGCCACATCCACTCCCAGCTTCTACCCTTGAGTGCATAAC CCTCAGGACGACAAGCACTC
Downstream 100 bases:
>100_bases GAATGTTTATGCAAGCTGTAATGAACCCGAAGTATCCAGGGCTCAGTGTACGGGTCGCCGACGAAGGCTTTGACGCCTAT GTGTGGGGCAATGATTTCAG
Product: putative Orn/Arg/Lys decarboxylase
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>751_residues MYKDLKFPVLIVHRDIKADTVAGDRVRGIARELEQEGFSIFSAVDYAEGRLVASTHHGLACMLIAAEGAGENTHLLQNMV ELIRLARLRAPNLPIFALGEQVTLENAPADAMSELNQLRGILYLFEDTVPFLARQVARAARTYLDGLLPPFFKALVQHTA DSNYSWHTPGHGGGVAYRKSPVGQAFHQFFGENTLRSDLSVSVPELGSLLDHTGPLAEAEARAARNFGADHTFFVINGTS TANKIVWHSMVGRDDLVLVDRNCHKSVLHSIIMTGAIPLYLCPERNELGIIGPIPLSEFSPESIRAKIDASPLTRGRAPK VKMAVVTNSTYDGLCYNAELIKQQLGNSVEVLHFDEAWYAYAAFHEFFAGRYGMGTSRTPDSPLVFTTHSTHKLLAAFSQ ASMIHVQDGGARQLDRDRFNEAFMMHISTSPQYSIIASLDVASAMMEGPAGRSLLQEMFDEALSFRRALANLRQHIAAED WWFTIWQPPSVAGIDRVVTADWLLHPQADWHGFGEVAEDYVLLDPIKVTLVMPGLNAGGALSDCGIPAAVVSKFLWERGL VVEKTGLYSFLVLFSMGITKGKWSTLLTELLEFKRSYDANVSLASCLPSVFAQGPTRYQGLGLRDLCDQLHSCYRSNATA KHLKRMYTVLPEIAMKPADAYDQLVRGEVEAVSIDALPGRIAAVMLVPYPPGIPLIMPGERFTESTRSIIDYLAFARTFD SSFPGFVADVHGLQHEDDGSGRCYTVDCIKG
Sequences:
NA
Specific function: NA
COG id: COG1982
COG function: function code E; Arginine/lysine/ornithine decarboxylases
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA