Definition Pseudomonas fluorescens SBW25 chromosome, complete genome.
Accession NC_012660
Length 6,722,539

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The map label for this gene is rapA

Identifier: 229588882

GI number:

Start: 1491750

End: 1494596

Strand: Reverse

Name: rapA

Synonym: PFLU1352

Alternate gene names: NA

Gene position: NA

Preceding gene: 229588884

Following gene: 229588880

Centisome position: NA

GC content: NA

Gene sequence:

>2847_bases
ATGGCGCAGCAGTATCAACCGGGGCAACGCTGGATTAGTGACAGCGAAGCAGAGCTGGGGTTAGGCACCGTTCTGGCACA
GGACGGCCGCTTGTTGACCGTGCTCTATCCGGCCACTGGCGACACCCGCCAGTATGCGCTACGGAATGCGCCCCTCACCC
GCGTGAGGTTCTCGCCGGGTGACTCCATCACCCATTTCGAAGGCTGGAAAATGACCGTGCAGGAAGTCGACGATGTCGAC
GGCCTGCTGGTGTACCACGGCCTCAATGGGCAGCACGAGCAGGTCACCCTGCCGGAAACCCAACTGTCCAACTTCATTCA
GTTCCGCCTGGCCAGCGACCGCCTGTTCGCCGGGCAGATCGACCCGCTGGCCTGGTTCTCGCTGCGTTACCACACGCTGG
AACACACCAGCCGCCAATTGCAGTCTTCGTTGTGGGGCCTGGGTGGTGTGCGTGCGCAACCTATCGCTCACCAATTGCAC
ATCGCCCGTGAAGTCGCTGACCGTATCGCGCCACGGGTATTGCTGGCTGACGAAGTCGGCTTGGGCAAGACCATCGAAGC
CGGCCTGGTGATCCATCGCCAATTGCTGTCGGGCCGCGCCAGCCGCGTGTTGATCCTGGTACCGGAAAACCTGCAGCACC
AGTGGCTGGTGGAAATGCGCCGCCGCTTCAACCTGCAGGTCGCGCTGTTCGATGAAGAGCGCTTTATCGAAAGCGATGCG
ACCAACCCGTTCGAAGACACCCAGTTGGCCCTGGTGGCCCTGGAATGGCTGGTCGACGACGAAAAGGCCCAGGACGCGCT
GTTCGCGGCCGGTTGGGACCTGTTGGTGGTCGACGAAGCCCACCACTTGGTGTGGCATGAAGACAAAGCCAGCGCCGAAT
ATTCGCTGGTCGAACAACTCGCCGAAGTGATTCCCGGCGTGCTGCTGCTCACCGCTACCCCCGAGCAACTCGGCCAGGAC
AGCCACTTCGCGCGCCTGCGCCTGCTCGACCCGAACCGTTTCCACGACCTGCACGCCTTCCGCGCCGAGAGCGAGAACTA
TCGCCCGGTGGCCGAAGCCGTGCAGGAGTTGCTCGACAAGGGCCGCTTGTCCCCCAAGGCCCACGAGACTATCCAGGGTT
TCCTCGGCAATGAAGGCGAAGCACTGCTGACCGCCGTCAACGATGGTGACACCGAAGCCAGCGCGCGCCTGGTGCGTGAG
CTGCTCGACCGCCACGGCACCGGCCGCGTGCTGTTCCGTAACACCCGCGCCGCCGTGCAAGGCTTCCCGGAGCGCAAGCT
GCACGCCTACCCGTTGCCGAACCCGGACGAGTACATGGAGTTGCCGCTGGGCGAACACGCCGAGCTGTACCCGGAAGTCA
GCTTCCAGTCGCAGCCGGATGTTGAAGAAGAACACCGCTGGTGGCGCTTCGACCCACGGGTCGAGTGGCTGATCGACCAG
CTGAAAATGCTCAAGCGCACCAAGGTCCTGGTGATCTGCGCCCACGCTGAAACCGCCATGGACCTGGAAGACGCCCTGCG
CGTACGTTCCGGCATCCCGGCCACGGTGTTCCACGAGGGCATGAACATCCTCGAGCGTGACCGCGCCGCCGCCTACTTCG
CCGATGAAGAGTTCGGCGCCCAGGTGCTGATCTGCTCGGAAATCGGCAGTGAAGGCCGTAACTTCCAGTTCTCCCACCAC
TTGGTGCTGTTCGACCTGCCGTCCCACCCCGACCTGCTGGAACAGCGGATCGGCCGTCTGGACCGGATCGGCCAGAAACA
CGTGATCGAACTGCACGTGCCGTACCTGGAAACCAGCCCGCAAGAGCGCCTGTTCCAGTGGTACCACGAAGCGCTGAACG
CGTTCCTCAACACCTGCCCGACCGGCAACGCCTTGCAGCATCAGTTCGGCCCACGCCTGCTGCCGCTGCTGGAAAACGCC
GACGACGGCGAGTGGCAAGCCCTGATCGACGAGGCCCGTGCCGAGCGCGAGCGTCTGGAACAGGAGCTGCACACCGGCCG
CGACCGTCTGCTGGAGCTCAACTCCGGCGGCGCAGGCGAAGGTGATGCGCTGGTGGAAGACATCCTCGAGCAAGACGATC
AGTTCGCCCTGCCGATCTACATGGAAACCCTGTTCGACGCATTCGGCATCGACAGTGAAGACCATTCGGAAAACGCGCTG
ATCCTCAAGCCCAGCGAAAAAATGCTCGACGCCAGCTTCCCTCTGGGCGACGACGAAGGCGTGACCATCACCTACGACCG
TAACCAGGCACTGTCGCGCGAAGACATGCAGTTCATCACCTGGGAACACCCGATGGTGCAGGGCGGCATGGACCTGGTGC
TGTCCGGTTCAATGGGCAACACCGCCGTGGCGTTGATCAAGAACAAGGCGCTCAAGCCGGGCACCGTGTTGCTGGAACTG
CTCTACGTCAGCGAAGTGGTTGCCCCGCGCTCGCTGCAACTGGGCCGCTACCTGCCACCGGCCGCCCTGCGCTGCCTGCT
GGATGCCAATGGCAACGACCTGTCCGGCCGTGTGACCTTCGAAACCCTCAACGACCAGTTGGAAAGCGTGCCACGTGCCA
GCGCCAACAAGTTCATCCAGGCCCAGCGCGACCAGCTGACGCCGCGGATCAACGCCGGTGAAGAGAAGATCACCCCACGC
CACGCCGAGCGCGTAGCCGAGGCCAAACGCCGCCTGGCGGCAGACACCGACGAAGAACTGGCGCGCCTGACCGCGTTGCA
AGCGGTCAACCCGACCGTACGCGACAGCGAGCTGGTTGCCCTGCGCACCCAACGCGAGCAAGGCCTGGCCATGCTGGATA
AGGCGGCGCTGCGCTTGGAAGCGATTCGGGTTCTGGTCGCCGGTTAA

Upstream 100 bases:

>100_bases
CGATGTGCCACCCCCAGGGAGTAGTTTTTGTCAGAGTCCTTGGGCGTGGGGGCTTGTTCCGTTAAGATAGTCGGCTTTTT
CACGGCGGGAGTCAGGCAGC

Downstream 100 bases:

>100_bases
TAGCTACCTTCTTTCTTTGTCTTGAGGGCCTCATCGGGGGCAAGCCCCCTCCCACACGTTGATTTGTGAAAGCAGTCAAA
TGTGGGAGGGGGCTTGCCCC

Product: ATP-dependent helicase HepA

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>948_residues
MAQQYQPGQRWISDSEAELGLGTVLAQDGRLLTVLYPATGDTRQYALRNAPLTRVRFSPGDSITHFEGWKMTVQEVDDVD
GLLVYHGLNGQHEQVTLPETQLSNFIQFRLASDRLFAGQIDPLAWFSLRYHTLEHTSRQLQSSLWGLGGVRAQPIAHQLH
IAREVADRIAPRVLLADEVGLGKTIEAGLVIHRQLLSGRASRVLILVPENLQHQWLVEMRRRFNLQVALFDEERFIESDA
TNPFEDTQLALVALEWLVDDEKAQDALFAAGWDLLVVDEAHHLVWHEDKASAEYSLVEQLAEVIPGVLLLTATPEQLGQD
SHFARLRLLDPNRFHDLHAFRAESENYRPVAEAVQELLDKGRLSPKAHETIQGFLGNEGEALLTAVNDGDTEASARLVRE
LLDRHGTGRVLFRNTRAAVQGFPERKLHAYPLPNPDEYMELPLGEHAELYPEVSFQSQPDVEEEHRWWRFDPRVEWLIDQ
LKMLKRTKVLVICAHAETAMDLEDALRVRSGIPATVFHEGMNILERDRAAAYFADEEFGAQVLICSEIGSEGRNFQFSHH
LVLFDLPSHPDLLEQRIGRLDRIGQKHVIELHVPYLETSPQERLFQWYHEALNAFLNTCPTGNALQHQFGPRLLPLLENA
DDGEWQALIDEARAERERLEQELHTGRDRLLELNSGGAGEGDALVEDILEQDDQFALPIYMETLFDAFGIDSEDHSENAL
ILKPSEKMLDASFPLGDDEGVTITYDRNQALSREDMQFITWEHPMVQGGMDLVLSGSMGNTAVALIKNKALKPGTVLLEL
LYVSEVVAPRSLQLGRYLPPAALRCLLDANGNDLSGRVTFETLNDQLESVPRASANKFIQAQRDQLTPRINAGEEKITPR
HAERVAEAKRRLAADTDEELARLTALQAVNPTVRDSELVALRTQREQGLAMLDKAALRLEAIRVLVAG

Sequences:
NA

Specific function: NA

COG id: COG0553

COG function: function code KL; Superfamily II DNA/RNA helicases, SNF2 family

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA