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The map label for this gene is rpoN

Identifier: 229588426

GI number:

Start: 991343

End: 992836

Strand: Reverse

Name: rpoN

Synonym: PFLU0882

Alternate gene names: NA

Gene position: NA

Preceding gene: 229588427

Following gene: 229588425

Centisome position: NA

GC content: NA

Gene sequence:

>1494_bases
ATGAAACCATCGCTAGTCCTGAGAATGGGCCAGCAGCTGACGATGACACCGCAGCTGCAACAGGCCATCCGCCTGCTCCA
ATTGTCGACCCTGGACCTGCAACAGGAAATCCAGGAGGCCCTGGAGTCCAATCCGATGCTCGAACGCCAGGAGGAAGGCG
ACGACTTCGATAATGCAGACCCGCTGGCCGATAATATCGAGCAAAAACCCAATCCCGACGTGCAGGAACCCTCCTACCAG
GAAACCGCCCCTACGGTGGATAACCTTGAGGAAGGCGAATGGAACGAACGCATTCCCAACGAGCTTCCGGTCGACACGGC
CTGGGAAGACGTCTACCAGACCAGCGCCAGCAGCCTGCCCAGCAATGACGATGATGAGTGGGACTTCACCACCCGCACCT
CCGTTGGCGAGAGCCTGCAGAGCCACCTGCTGTGGCAACTGAACCTTGCGCCGATGTCGGACACCGATCGCTTGATCGCC
GTGACCCTGATCGACTGCATCAACAATCAGGGTTACCTGGACGAGACGCTCGAAGAAATTCTTGAAGCCTTCGATCCGGA
GCTGGATATCGAGCTGGACGAGATCGAAGCCGTCCTGCACCGCATCCAACAGTTCGAGCCCGCCGGCATCGGCGCACGCA
CCCTCAGCGAATGCCTGTTGCTGCAATTGCGCCAATTACCGGCCAAGACCCCCTGGCTCGCCGAAGCCCAGCGCCTGGTG
ACCGATTACATCGACCTGCTGGGCAGCCGCGACTACAGCCAGTTGATGCGCCGCATGAAGCTCAAGGAAGACGACCTGCG
CCAGGTCATCGAGCTGGTACAGAGCCTCAACCCGCGTCCTGGCTCACAAATCGAATCGAGCGAAGCCGAATACGTGGTTC
CCGATGTGATCGTGCGCAAGGACAACGAGCGCTGGCTGGTAGAGCTGAACCAGGAATCGGTGCCGCGCCTGCGGGTGAAC
CCGCAATACGCCGGCTTCGTACGTCGCGCCGATACCAGTGCCGACAACACCTTCATGCGCAACCAGTTGCAGGAAGCGCG
CTGGTTCATCAAGAGCCTGCAAAGCCGAAACGAAACCCTGATGAAAGTCGCCACCCAGATCGTCGAGCATCAGCGCGGCT
TCCTGGAGTACGGCGACGAAGCGATGAAACCGCTGGTGCTGCATGACATCGCCGAAGCGGTCGGCATGCATGAATCAACG
ATTTCCCGGGTGACCACGCAAAAATTCATGCATACCCCTCGGGGTATTTATGAACTGAAATACTTTTTCTCCAGCCACGT
CAGCACCTCCGAAGGCGGTGAATGCTCGTCCACGGCGATCCGCGCGATCATCAAAAAACTGGTTGCTGCTGAAAATCAGA
AAAAGCCATTGAGTGACAGTAAGATCGCTGGTTTACTGGAGGCACAAGGCATTCAGGTCGCCCGTCGAACCGTCGCCAAG
TACCGCGAATCCCTTGGGATCGCGCCTTCCAGCGAGCGTAAGCGTTTGATGTGA

Upstream 100 bases:

>100_bases
AGCCCCCGACATCAGGCATATAATTTGCTTATGTTTGGCGCTCACGCGCCCTGTCGTGGATGGCGCATTGCGCCGGCGAA
TAAGGTGTTAAGCCCCTGCC

Downstream 100 bases:

>100_bases
CGGGCGGGCCACAGCGTTCCGGGATGCGTTTTGAAACTCGCCGAGCGGCGATCAGGCAAGATCGACGCGCAGGCAGTTTT
AAAATGCAGACCAGTGGCGG

Product: RNA polymerase factor sigma-54

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>497_residues
MKPSLVLRMGQQLTMTPQLQQAIRLLQLSTLDLQQEIQEALESNPMLERQEEGDDFDNADPLADNIEQKPNPDVQEPSYQ
ETAPTVDNLEEGEWNERIPNELPVDTAWEDVYQTSASSLPSNDDDEWDFTTRTSVGESLQSHLLWQLNLAPMSDTDRLIA
VTLIDCINNQGYLDETLEEILEAFDPELDIELDEIEAVLHRIQQFEPAGIGARTLSECLLLQLRQLPAKTPWLAEAQRLV
TDYIDLLGSRDYSQLMRRMKLKEDDLRQVIELVQSLNPRPGSQIESSEAEYVVPDVIVRKDNERWLVELNQESVPRLRVN
PQYAGFVRRADTSADNTFMRNQLQEARWFIKSLQSRNETLMKVATQIVEHQRGFLEYGDEAMKPLVLHDIAEAVGMHEST
ISRVTTQKFMHTPRGIYELKYFFSSHVSTSEGGECSSTAIRAIIKKLVAAENQKKPLSDSKIAGLLEAQGIQVARRTVAK
YRESLGIAPSSERKRLM

Sequences:
NA

Specific function: NA

COG id: COG1508

COG function: function code K; DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA