| Definition | Rickettsia africae ESF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_012633 |
| Length | 1,278,540 |
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The map label for this gene is ampG3 [H]
Identifier: 229587143
GI number: 229587143
Start: 1123450
End: 1125096
Strand: Direct
Name: ampG3 [H]
Synonym: RAF_ORF1106
Alternate gene names: 229587143
Gene position: 1123450-1125096 (Clockwise)
Preceding gene: 229587142
Following gene: 229587144
Centisome position: 87.87
GC content: 33.64
Gene sequence:
>1647_bases ATGTACAAAATTTTTAATCATTCCTTTATGTCATTCCTGCGAGGCATTATTGCGTGTGTACCTAATCGTCATTGCAAGCG ACTGAAAGCGTTGTTGCATGGCTCAAAAAACGTATTCGGTGTTATACCATGGCTTGACCACGGTATCCAGAAAACAACTA AAAATACTAACAATATTAGTATTTGGGTCCTGCTACAAACTTGCGGGATGACAGAAGTGGAAGCAAGCCATGCAACAAAG CCACAACTGCAAGAAGCGTGGTGGCAATCCAGAAATAATAATAGAATATTCTGTAAATCAGAATTTTTTACTGGATTGCT TCGTCGCAACTTACAGTTTTTCCTCACAATGACGTTGAAGATCAATTCATGCAAGAATGACACAAATAACCATACATATT TAATCGGTATTTTACTTTTAGGCTTAATTTCCGGTCTGACGTTCAATTTAATTTTTTTTACAGTTCCATATCAATTATCC GAAGCAAAATACACCACTGATATAATAGGTTCGATATCACTAGCTGCCTTTCCGTATTGCTTAAAGGTCATATGGTCACC TTTTATAGATAAATACTCTATACCTTTTTTATGTTCTAAATTCGGTCACAGGCGTGGCTGGGCATTGGTATCACAAATAT TTTTAATCCTAGCGATGACGGGGTTCTTAAACATAAGCCCTTGTAATAACTTATATATTACTGCAATTATCTTATTTATT ATTTCATCCTGCAGTTCTACACAAGATATTGTACTTGATGCATATAGAATTGAGAGACCTACATCTAAAGAAGAGCTTTC AATGGCTTTTACCTTTAGTAGCATAGGGTTTCGTTTAGGTATGTTACTTGGCAGCGTCGGTACTTTATATTCATCAATTA TTTTCGGCTGGAATACAGTATATAAATCGGCTCTATTCATTACTCTAATTGGACCTATAGTAATTTTATGTATCAAAGAA CCACAATCAAAAGAAATACACCATACAACTACTCATTTAATAGGATTACAACAATATTTTGAAGTTATTAAAAAAAGTAT TATCTCCTTAAAAAATGAACAGCAATATTTACTGCTAATTATATTGTTTATCTTTTTATATAAGGCTGCGGATTCTATAC CTATGGCTATGAGTTCGCCTTTATTGCTCGATTTAAGTTTTACTACTCATGAAATTGCCGTTATTTACAAAGCTTACGGG TTACTAATCATGATCATCGGAGGAGCTTTAAGCGGCGTTTTAGCTGCAAAAATGGGTATATTGCATAGTGTCTTAATTGG TGGAGTTATTCAATTATTGTCACCTCTTATGTTTATGATTCTTGCTACTATCGGCTATGATATAAAGACATTTATAATAA CTGTTACAGTACAAAATTTTTGTGCAGGCTTTGCAGGAACTATTATCTCTATCTATTTTGCTAGCCTTTGCAATAGTGAA TTTGTTGCCACACAGTATTCTATTATTGCATCTTTTAGCTCGCTTAGCCGTATTATTCTAGCTAGCCTTGGCGGTATTTG TGCAAAATATCTTACTTGGCCTGTATTCTTTTTAGGTAATACTCTGTTTAGCATGTTATTTATCCCGATATTTTATAAAA TATATAGAAAGAAACTAGGCTTTGTGAATATTTCTAAAAAGATATGA
Upstream 100 bases:
>100_bases TTGTAACTAAAATACCGGTAGTCGGTAAAATATTTTCCAAAGTCGCTCCTTACTCCCTAAAAATGAAATATTAAGTAACT ATTTAAAGCTATTAGATTTC
Downstream 100 bases:
>100_bases CAATTATTAAAAAAAGTTTATAATATTGATATATATATTTCTGCGCAATGAAGAGTCAGAATTTTTATGAAACTATATAG TTTTCAAGAACATTTATTAG
Product: AmpG
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 548; Mature: 548
Protein sequence:
>548_residues MYKIFNHSFMSFLRGIIACVPNRHCKRLKALLHGSKNVFGVIPWLDHGIQKTTKNTNNISIWVLLQTCGMTEVEASHATK PQLQEAWWQSRNNNRIFCKSEFFTGLLRRNLQFFLTMTLKINSCKNDTNNHTYLIGILLLGLISGLTFNLIFFTVPYQLS EAKYTTDIIGSISLAAFPYCLKVIWSPFIDKYSIPFLCSKFGHRRGWALVSQIFLILAMTGFLNISPCNNLYITAIILFI ISSCSSTQDIVLDAYRIERPTSKEELSMAFTFSSIGFRLGMLLGSVGTLYSSIIFGWNTVYKSALFITLIGPIVILCIKE PQSKEIHHTTTHLIGLQQYFEVIKKSIISLKNEQQYLLLIILFIFLYKAADSIPMAMSSPLLLDLSFTTHEIAVIYKAYG LLIMIIGGALSGVLAAKMGILHSVLIGGVIQLLSPLMFMILATIGYDIKTFIITVTVQNFCAGFAGTIISIYFASLCNSE FVATQYSIIASFSSLSRIILASLGGICAKYLTWPVFFLGNTLFSMLFIPIFYKIYRKKLGFVNISKKI
Sequences:
>Translated_548_residues MYKIFNHSFMSFLRGIIACVPNRHCKRLKALLHGSKNVFGVIPWLDHGIQKTTKNTNNISIWVLLQTCGMTEVEASHATK PQLQEAWWQSRNNNRIFCKSEFFTGLLRRNLQFFLTMTLKINSCKNDTNNHTYLIGILLLGLISGLTFNLIFFTVPYQLS EAKYTTDIIGSISLAAFPYCLKVIWSPFIDKYSIPFLCSKFGHRRGWALVSQIFLILAMTGFLNISPCNNLYITAIILFI ISSCSSTQDIVLDAYRIERPTSKEELSMAFTFSSIGFRLGMLLGSVGTLYSSIIFGWNTVYKSALFITLIGPIVILCIKE PQSKEIHHTTTHLIGLQQYFEVIKKSIISLKNEQQYLLLIILFIFLYKAADSIPMAMSSPLLLDLSFTTHEIAVIYKAYG LLIMIIGGALSGVLAAKMGILHSVLIGGVIQLLSPLMFMILATIGYDIKTFIITVTVQNFCAGFAGTIISIYFASLCNSE FVATQYSIIASFSSLSRIILASLGGICAKYLTWPVFFLGNTLFSMLFIPIFYKIYRKKLGFVNISKKI >Mature_548_residues MYKIFNHSFMSFLRGIIACVPNRHCKRLKALLHGSKNVFGVIPWLDHGIQKTTKNTNNISIWVLLQTCGMTEVEASHATK PQLQEAWWQSRNNNRIFCKSEFFTGLLRRNLQFFLTMTLKINSCKNDTNNHTYLIGILLLGLISGLTFNLIFFTVPYQLS EAKYTTDIIGSISLAAFPYCLKVIWSPFIDKYSIPFLCSKFGHRRGWALVSQIFLILAMTGFLNISPCNNLYITAIILFI ISSCSSTQDIVLDAYRIERPTSKEELSMAFTFSSIGFRLGMLLGSVGTLYSSIIFGWNTVYKSALFITLIGPIVILCIKE PQSKEIHHTTTHLIGLQQYFEVIKKSIISLKNEQQYLLLIILFIFLYKAADSIPMAMSSPLLLDLSFTTHEIAVIYKAYG LLIMIIGGALSGVLAAKMGILHSVLIGGVIQLLSPLMFMILATIGYDIKTFIITVTVQNFCAGFAGTIISIYFASLCNSE FVATQYSIIASFSSLSRIILASLGGICAKYLTWPVFFLGNTLFSMLFIPIFYKIYRKKLGFVNISKKI
Specific function: Probably Acts As A Permease In The Beta-Lactamase Induction System And In Peptidoglycan Recycling. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
Organism=Escherichia coli, GI1786636, Length=384, Percent_Identity=28.3854166666667, Blast_Score=164, Evalue=2e-41,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 61582; Mature: 61582
Theoretical pI: Translated: 9.73; Mature: 9.73
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYKIFNHSFMSFLRGIIACVPNRHCKRLKALLHGSKNVFGVIPWLDHGIQKTTKNTNNIS CCEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEHHHHCCHHHHCCCCCCEE IWVLLQTCGMTEVEASHATKPQLQEAWWQSRNNNRIFCKSEFFTGLLRRNLQFFLTMTLK EEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEHHHHHHHHHCCHHEEEEEEEE INSCKNDTNNHTYLIGILLLGLISGLTFNLIFFTVPYQLSEAKYTTDIIGSISLAAFPYC EECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCHHCCCHHHHHHHHHHHHHHHHHH LKVIWSPFIDKYSIPFLCSKFGHRRGWALVSQIFLILAMTGFLNISPCNNLYITAIILFI HHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCEECCCCCCHHHHHHHHHH ISSCSSTQDIVLDAYRIERPTSKEELSMAFTFSSIGFRLGMLLGSVGTLYSSIIFGWNTV HHCCCCCHHHHHHHHHCCCCCCHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YKSALFITLIGPIVILCIKEPQSKEIHHTTTHLIGLQQYFEVIKKSIISLKNEQQYLLLI HHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH ILFIFLYKAADSIPMAMSSPLLLDLSFTTHEIAVIYKAYGLLIMIIGGALSGVLAAKMGI HHHHHHHHHCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LHSVLIGGVIQLLSPLMFMILATIGYDIKTFIITVTVQNFCAGFAGTIISIYFASLCNSE HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHEEEEEHHHHHHHHHHHHHHHHHHHHCCCC FVATQYSIIASFSSLSRIILASLGGICAKYLTWPVFFLGNTLFSMLFIPIFYKIYRKKLG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC FVNISKKI CCCCCCCC >Mature Secondary Structure MYKIFNHSFMSFLRGIIACVPNRHCKRLKALLHGSKNVFGVIPWLDHGIQKTTKNTNNIS CCEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEHHHHCCHHHHCCCCCCEE IWVLLQTCGMTEVEASHATKPQLQEAWWQSRNNNRIFCKSEFFTGLLRRNLQFFLTMTLK EEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEHHHHHHHHHCCHHEEEEEEEE INSCKNDTNNHTYLIGILLLGLISGLTFNLIFFTVPYQLSEAKYTTDIIGSISLAAFPYC EECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEECCHHCCCHHHHHHHHHHHHHHHHHH LKVIWSPFIDKYSIPFLCSKFGHRRGWALVSQIFLILAMTGFLNISPCNNLYITAIILFI HHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHCEECCCCCCHHHHHHHHHH ISSCSSTQDIVLDAYRIERPTSKEELSMAFTFSSIGFRLGMLLGSVGTLYSSIIFGWNTV HHCCCCCHHHHHHHHHCCCCCCHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YKSALFITLIGPIVILCIKEPQSKEIHHTTTHLIGLQQYFEVIKKSIISLKNEQQYLLLI HHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH ILFIFLYKAADSIPMAMSSPLLLDLSFTTHEIAVIYKAYGLLIMIIGGALSGVLAAKMGI HHHHHHHHHCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LHSVLIGGVIQLLSPLMFMILATIGYDIKTFIITVTVQNFCAGFAGTIISIYFASLCNSE HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHEEEEEHHHHHHHHHHHHHHHHHHHHCCCC FVATQYSIIASFSSLSRIILASLGGICAKYLTWPVFFLGNTLFSMLFIPIFYKIYRKKLG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC FVNISKKI CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11557893 [H]