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The map label for this gene is surf1

Identifier: 229587087

GI number: 229587087

Start: 1043816

End: 1044538

Strand: Direct

Name: surf1

Synonym: RAF_ORF1021

Alternate gene names: NA

Gene position: 1043816-1044538 (Clockwise)

Preceding gene: 229587086

Following gene: 229587088

Centisome position: 81.64

GC content: 32.92

Gene sequence:

>723_bases
ATGAAAACAAATTTTCTTGTATTTATAACCTTTACAATACTTATCTCTTTAGGCTTTTGGCAGCTTAGTCGTTTAAAAGA
AAAGAAATTATTTTTAGCTTCAATGCAAGCTAACCTAACCTCACCTGCAATTAATTTAGCAGAAATTCAAGACGGTTTAC
CTTATCACAAAGTAAAAATTACCGGTCAATTTTTGCCTAATAAAGACATATATTTATACGGTAGAAGGTCAATGTCGAGT
GAAAAAGACGGATATTATTTAGTTACTCCTTTTAAAACCATAGAAGATAAAGTTATTTTAGTAGCACGAGGTTGGTTCAG
TAATCGCAATAAAAATATTATCACGCAAGCTACAAACGACCGGCAGCACGAGATTATCGGTGTTACCATGCCATCAGAAA
AAACTCGTATCTACTTACCTGCTAACGATATAAAAAATAATGTGTGGCTAACGCTAAATTTAAAAGAAACATCCAAAGTG
TTAGGCTTAGATCTTGAGAATTTTTATATTATTGCGGAAGAAAAAGATATTAGCAATCTAGATATTTTATTACCTCTTGC
AATAAATCATTTAGCAGCAATCAGAAATGACCATTTAGAATACGCCCTAACTTGGTTTGGACTTGCTATTTCTTTAATCG
TAATATATGTAATTTATCGGCGTCGTTATATGGCTGTGGATGTCATCCCGCGAGCTTGTAGCGGGATCCAGAAAAATAAT
TAA

Upstream 100 bases:

>100_bases
AGCCTCGACGTGGCAATCTCAGGAGTTTTATATTATTTCATGAGATTGCCACGTTCCTTTTAATCGCTCGCAATGACGAT
TATCAACAATCCCCTTATCT

Downstream 100 bases:

>100_bases
AAAGACTGGGCCCCGTGGTCAAGCCACGGGGTAACAGTAGAAAATCGATACATAAATGAGTGACTTACAAAGAGAAGCAT
CCGATCCTAATTACTCCGTT

Product: Surfeit locus protein 1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 240; Mature: 240

Protein sequence:

>240_residues
MKTNFLVFITFTILISLGFWQLSRLKEKKLFLASMQANLTSPAINLAEIQDGLPYHKVKITGQFLPNKDIYLYGRRSMSS
EKDGYYLVTPFKTIEDKVILVARGWFSNRNKNIITQATNDRQHEIIGVTMPSEKTRIYLPANDIKNNVWLTLNLKETSKV
LGLDLENFYIIAEEKDISNLDILLPLAINHLAAIRNDHLEYALTWFGLAISLIVIYVIYRRRYMAVDVIPRACSGIQKNN

Sequences:

>Translated_240_residues
MKTNFLVFITFTILISLGFWQLSRLKEKKLFLASMQANLTSPAINLAEIQDGLPYHKVKITGQFLPNKDIYLYGRRSMSS
EKDGYYLVTPFKTIEDKVILVARGWFSNRNKNIITQATNDRQHEIIGVTMPSEKTRIYLPANDIKNNVWLTLNLKETSKV
LGLDLENFYIIAEEKDISNLDILLPLAINHLAAIRNDHLEYALTWFGLAISLIVIYVIYRRRYMAVDVIPRACSGIQKNN
>Mature_240_residues
MKTNFLVFITFTILISLGFWQLSRLKEKKLFLASMQANLTSPAINLAEIQDGLPYHKVKITGQFLPNKDIYLYGRRSMSS
EKDGYYLVTPFKTIEDKVILVARGWFSNRNKNIITQATNDRQHEIIGVTMPSEKTRIYLPANDIKNNVWLTLNLKETSKV
LGLDLENFYIIAEEKDISNLDILLPLAINHLAAIRNDHLEYALTWFGLAISLIVIYVIYRRRYMAVDVIPRACSGIQKNN

Specific function: Unknown

COG id: COG3346

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SURF1 family [H]

Homologues:

Organism=Homo sapiens, GI4507319, Length=231, Percent_Identity=26.4069264069264, Blast_Score=75, Evalue=5e-14,
Organism=Saccharomyces cerevisiae, GI6321550, Length=184, Percent_Identity=26.6304347826087, Blast_Score=63, Evalue=4e-11,
Organism=Drosophila melanogaster, GI17864366, Length=238, Percent_Identity=28.1512605042017, Blast_Score=73, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002994 [H]

Pfam domain/function: PF02104 SURF1 [H]

EC number: NA

Molecular weight: Translated: 27629; Mature: 27629

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: PS50895 SURF1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTNFLVFITFTILISLGFWQLSRLKEKKLFLASMQANLTSPAINLAEIQDGLPYHKVKI
CCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHEEEHHCCCCCCCEEHHHHHCCCCEEEEEE
TGQFLPNKDIYLYGRRSMSSEKDGYYLVTPFKTIEDKVILVARGWFSNRNKNIITQATND
EEEECCCCCEEEEECCCCCCCCCCEEEEECCCCCCCEEEEEEECCCCCCCCEEEEECCCC
RQHEIIGVTMPSEKTRIYLPANDIKNNVWLTLNLKETSKVLGLDLENFYIIAEEKDISNL
CCEEEEEEECCCCCCEEEECCCCCCCCEEEEEEECCCCCEEEEECCCEEEEEECCCCCCC
DILLPLAINHLAAIRNDHLEYALTWFGLAISLIVIYVIYRRRYMAVDVIPRACSGIQKNN
EEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCHHHHCCCCCCC
>Mature Secondary Structure
MKTNFLVFITFTILISLGFWQLSRLKEKKLFLASMQANLTSPAINLAEIQDGLPYHKVKI
CCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHEEEHHCCCCCCCEEHHHHHCCCCEEEEEE
TGQFLPNKDIYLYGRRSMSSEKDGYYLVTPFKTIEDKVILVARGWFSNRNKNIITQATND
EEEECCCCCEEEEECCCCCCCCCCEEEEECCCCCCCEEEEEEECCCCCCCCEEEEECCCC
RQHEIIGVTMPSEKTRIYLPANDIKNNVWLTLNLKETSKVLGLDLENFYIIAEEKDISNL
CCEEEEEEECCCCCCEEEECCCCCCCCEEEEEEECCCCCEEEEECCCEEEEEECCCCCCC
DILLPLAINHLAAIRNDHLEYALTWFGLAISLIVIYVIYRRRYMAVDVIPRACSGIQKNN
EEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11557893 [H]