The gene/protein map for NC_012633 is currently unavailable.
Definition Rickettsia africae ESF-5 chromosome, complete genome.
Accession NC_012633
Length 1,278,540

Click here to switch to the map view.

The map label for this gene is 229587032

Identifier: 229587032

GI number: 229587032

Start: 965866

End: 966132

Strand: Direct

Name: 229587032

Synonym: RAF_ORF0935

Alternate gene names: NA

Gene position: 965866-966132 (Clockwise)

Preceding gene: 229587031

Following gene: 229587033

Centisome position: 75.54

GC content: 32.21

Gene sequence:

>267_bases
ATGTCTCCAAAATTCATGACATTTTACGAAAAATATATGACGATTGTCGGTACAATCGGCAATTTTATGTTCTATGTACA
GGCTCATAAGATTTTCACCTGCCAATCTTCGGCTTCTGTTTCTATGCCCGCCTTTACTATAAGTGCTATTGCTCTTTGTA
GTTGGCTTATATACGGCATATTAATAAAAAATACACCTATTATAATAGCAAATATAGTAGGTTTTATCGGGGCATTATTA
GTTCTCTTAACCATAATAATATATTAA

Upstream 100 bases:

>100_bases
TAATTTGATAAAATAACCATATAAAAACAAGTTTTTATATGATTTTAATGGATTCCCGCCTACGCAGAAATGACATAGAC
CACTTTTTAAAAATAAATAT

Downstream 100 bases:

>100_bases
ATAATGACTAAGCAAATCATTACTTTAGTTGGCCGTCCGAATGTAGGCAAATCAACGCTTTTCAATAGATTAAGCATACG
TAAAAAAGCTATCGTTCACG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 88; Mature: 87

Protein sequence:

>88_residues
MSPKFMTFYEKYMTIVGTIGNFMFYVQAHKIFTCQSSASVSMPAFTISAIALCSWLIYGILIKNTPIIIANIVGFIGALL
VLLTIIIY

Sequences:

>Translated_88_residues
MSPKFMTFYEKYMTIVGTIGNFMFYVQAHKIFTCQSSASVSMPAFTISAIALCSWLIYGILIKNTPIIIANIVGFIGALL
VLLTIIIY
>Mature_87_residues
SPKFMTFYEKYMTIVGTIGNFMFYVQAHKIFTCQSSASVSMPAFTISAIALCSWLIYGILIKNTPIIIANIVGFIGALLV
LLTIIIY

Specific function: Unknown

COG id: COG4095

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9780; Mature: 9649

Theoretical pI: Translated: 9.15; Mature: 9.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
8.0 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
6.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPKFMTFYEKYMTIVGTIGNFMFYVQAHKIFTCQSSASVSMPAFTISAIALCSWLIYGI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHHHHHHHHHH
LIKNTPIIIANIVGFIGALLVLLTIIIY
HHCCCCCHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
SPKFMTFYEKYMTIVGTIGNFMFYVQAHKIFTCQSSASVSMPAFTISAIALCSWLIYGI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHHHHHHHHHH
LIKNTPIIIANIVGFIGALLVLLTIIIY
HHCCCCCHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA