| Definition | Rickettsia africae ESF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_012633 |
| Length | 1,278,540 |
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The map label for this gene is 229587015
Identifier: 229587015
GI number: 229587015
Start: 949033
End: 949281
Strand: Direct
Name: 229587015
Synonym: RAF_ORF0918
Alternate gene names: NA
Gene position: 949033-949281 (Clockwise)
Preceding gene: 229587014
Following gene: 229587016
Centisome position: 74.23
GC content: 33.33
Gene sequence:
>249_bases GTGAAACAAAATTTATCTAATCAAATTAACCTACTCGAAGCAAAAACTCATTTTTCTGATCTAATACAACGTGTACAAGA CGGAGAGCAAATTACCATTTGTAAGCATAATACGCCGGTTGCAAAAAGTATAACTCAAAAACCTAAAATGGATAATATAG TAGAGCAAACAAGAGAATTCCGCAAAGGCAAAACATTAGAGCTCCTTATACTAATTAAAGAGCTTAGAGATGAAGGTAGA CAATGGTGA
Upstream 100 bases:
>100_bases TTAGGTTTGATACAAAGATATTAATTTAAACTATTAATATTACTGTATAAAATCTTATAAATAGGATAATATTAAATTAG TCTATTATTATATTACCTAT
Downstream 100 bases:
>100_bases ATTCTAAATCGTTTATAGCCGATTGCTCCATAACTGTCTCATGGTTCTTTTATGATGAACGTGATAAATATTCAGATTTT ACATTAGATTATTGTTATAA
Product: Antitoxin of toxin-antitoxin (TA) system Phd
Products: NA
Alternate protein names: Antitoxin Of xin-Antitoxin
Number of amino acids: Translated: 82; Mature: 82
Protein sequence:
>82_residues MKQNLSNQINLLEAKTHFSDLIQRVQDGEQITICKHNTPVAKSITQKPKMDNIVEQTREFRKGKTLELLILIKELRDEGR QW
Sequences:
>Translated_82_residues MKQNLSNQINLLEAKTHFSDLIQRVQDGEQITICKHNTPVAKSITQKPKMDNIVEQTREFRKGKTLELLILIKELRDEGR QW >Mature_82_residues MKQNLSNQINLLEAKTHFSDLIQRVQDGEQITICKHNTPVAKSITQKPKMDNIVEQTREFRKGKTLELLILIKELRDEGR QW
Specific function: Unknown
COG id: COG4118
COG function: function code D; Antitoxin of toxin-antitoxin stability system
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9629; Mature: 9629
Theoretical pI: Translated: 9.93; Mature: 9.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQNLSNQINLLEAKTHFSDLIQRVQDGEQITICKHNTPVAKSITQKPKMDNIVEQTREF CCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHCCCCCHHHHHHHHHH RKGKTLELLILIKELRDEGRQW HCCCCHHHHHHHHHHHHCCCCC >Mature Secondary Structure MKQNLSNQINLLEAKTHFSDLIQRVQDGEQITICKHNTPVAKSITQKPKMDNIVEQTREF CCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHCCCCCHHHHHHHHHH RKGKTLELLILIKELRDEGRQW HCCCCHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA