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The map label for this gene is rpmI [H]

Identifier: 229586951

GI number: 229586951

Start: 884415

End: 884684

Strand: Direct

Name: rpmI [H]

Synonym: RAF_ORF0846

Alternate gene names: 229586951

Gene position: 884415-884684 (Clockwise)

Preceding gene: 229586945

Following gene: 229586952

Centisome position: 69.17

GC content: 31.85

Gene sequence:

>270_bases
ATGGCTTTGGTATGCCTAATGTTTTACCGTTTAAACCTAGAAATACCAATTATAAGGAACAATATGCCTAAATTAAAAAC
AAAGTCTGCTGTAAAAAAACGTTTTAAACTTACTGCTAGCGGCAAGGTTATTGCATCTCAAGCAGGTAAAAAACATTTTA
TGCGTCGTCGTACTAAAGCTCAAATTCGTAACCTTAGAGGAACTACAATACTTTGTCCTCAAGACGGATATAATATTAAA
AAATATTTTTTACCGTACGGTATAAATTAA

Upstream 100 bases:

>100_bases
TAAATTATTATCGATTGATTAAAAACATTATAGTACATTTTTATAAAAAAATCTTGCAATAACTAATAAAAAAAACTATT
ATCTAGGTTTCATCGGTCAT

Downstream 100 bases:

>100_bases
TTAACTAGGAGCTAAAGCAATGACACGTGCAAAATCAGGAAAAATTTCCAAAAATCGACATAAAAAAATCCTTAAATTAG
CCAAAGGCTATAGAGGTAGA

Product: 50S ribosomal protein L35

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 89; Mature: 88

Protein sequence:

>89_residues
MALVCLMFYRLNLEIPIIRNNMPKLKTKSAVKKRFKLTASGKVIASQAGKKHFMRRRTKAQIRNLRGTTILCPQDGYNIK
KYFLPYGIN

Sequences:

>Translated_89_residues
MALVCLMFYRLNLEIPIIRNNMPKLKTKSAVKKRFKLTASGKVIASQAGKKHFMRRRTKAQIRNLRGTTILCPQDGYNIK
KYFLPYGIN
>Mature_88_residues
ALVCLMFYRLNLEIPIIRNNMPKLKTKSAVKKRFKLTASGKVIASQAGKKHFMRRRTKAQIRNLRGTTILCPQDGYNIKK
YFLPYGIN

Specific function: Unknown

COG id: COG0291

COG function: function code J; Ribosomal protein L35

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L35P family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021137
- InterPro:   IPR018265
- InterPro:   IPR001706 [H]

Pfam domain/function: PF01632 Ribosomal_L35p [H]

EC number: NA

Molecular weight: Translated: 10317; Mature: 10185

Theoretical pI: Translated: 11.58; Mature: 11.58

Prosite motif: PS00936 RIBOSOMAL_L35

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALVCLMFYRLNLEIPIIRNNMPKLKTKSAVKKRFKLTASGKVIASQAGKKHFMRRRTKA
CHHHHEEHHHHCCCEEEECCCCCCCHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHH
QIRNLRGTTILCPQDGYNIKKYFLPYGIN
HHHCCCCCEEECCCCCCCCEEEEECCCCC
>Mature Secondary Structure 
ALVCLMFYRLNLEIPIIRNNMPKLKTKSAVKKRFKLTASGKVIASQAGKKHFMRRRTKA
HHHHEEHHHHCCCEEEECCCCCCCHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHH
QIRNLRGTTILCPQDGYNIKKYFLPYGIN
HHHCCCCCEEECCCCCCCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA