| Definition | Rickettsia africae ESF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_012633 |
| Length | 1,278,540 |
Click here to switch to the map view.
The map label for this gene is 229586823
Identifier: 229586823
GI number: 229586823
Start: 722709
End: 723464
Strand: Direct
Name: 229586823
Synonym: RAF_ORF0691
Alternate gene names: NA
Gene position: 722709-723464 (Clockwise)
Preceding gene: 229586822
Following gene: 229586824
Centisome position: 56.53
GC content: 29.37
Gene sequence:
>756_bases ATGCACAAATTCGATAGTTTATTTAAAAGCAAAAACATCTTTTTTATAGCAATAGTAATATTTGTCTTATCTTCTTTTAC TCTTTATCATAATAGATCCGATATTTTAAAACTTTTTAAAAGTAAAAATAAGGATTTAAGCCAAATTCCTGATCAAGCAG TAGAAAATAAAGAAAATACTACCCTGGAAGAAAAGGAAGCAGCTCCTCTATTATCTACCAAGTCGCTTTTAAATTACATA AGTTCTTTAAAGTTTCCTGAAGCACCGACTAATTTAGTAGAACCAAAATTAGACACTGTAGTCAATTCAACTTCATTCGG ATACAAGGAACAAGGAGCGAAGAAGCCTATAACTAATAGGAGAGCGACGAGTGATGAGGTAGGCGTATGGGTATCACTTA ACTATATTAATTACTTATTAAATGTAAATCTATTAGTATATAATTTCATGCAAGATAAGGATTATAGTAAAGAACTAAGA ATAGTAAAATCCCGCCTGCTGCCTCAAGATATAAGGAATATTTTAAATAACTTAGAAACATATAATAATTATCTTTTTTC TAAATCAAGTAGTACGGAAGTAATTTTTCCTACCAACCATAAGTGGCTGGAGAAGTTTATCAAAATTGAAAAAAAACCTT CTGCTATGATGATAACAGAACAAGATAAACCTCTAATTTTAGAGAACTTAAACTATCTAATCGATTGTCTTTATTCAGAA AAATTTATGCAGGAGTTTGTAAATCAAGATGTTTAG
Upstream 100 bases:
>100_bases ATAAGTTTGAAAGTTGCAAATATAGTTAGACCTTTTATAAAAAATGTGGTTTATTGTGATGATCAAAACCTTAACGATAT AATCAAGTTATTATCTGAAA
Downstream 100 bases:
>100_bases GTTATTATTAATATGTGCTACTTTTTTACTGCTTTATTTCGGGTTTACTTTTATAGAGAGGTTTGATTCAAAAGTTTTTA TTAGTTTATATGATTATAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 251; Mature: 251
Protein sequence:
>251_residues MHKFDSLFKSKNIFFIAIVIFVLSSFTLYHNRSDILKLFKSKNKDLSQIPDQAVENKENTTLEEKEAAPLLSTKSLLNYI SSLKFPEAPTNLVEPKLDTVVNSTSFGYKEQGAKKPITNRRATSDEVGVWVSLNYINYLLNVNLLVYNFMQDKDYSKELR IVKSRLLPQDIRNILNNLETYNNYLFSKSSSTEVIFPTNHKWLEKFIKIEKKPSAMMITEQDKPLILENLNYLIDCLYSE KFMQEFVNQDV
Sequences:
>Translated_251_residues MHKFDSLFKSKNIFFIAIVIFVLSSFTLYHNRSDILKLFKSKNKDLSQIPDQAVENKENTTLEEKEAAPLLSTKSLLNYI SSLKFPEAPTNLVEPKLDTVVNSTSFGYKEQGAKKPITNRRATSDEVGVWVSLNYINYLLNVNLLVYNFMQDKDYSKELR IVKSRLLPQDIRNILNNLETYNNYLFSKSSSTEVIFPTNHKWLEKFIKIEKKPSAMMITEQDKPLILENLNYLIDCLYSE KFMQEFVNQDV >Mature_251_residues MHKFDSLFKSKNIFFIAIVIFVLSSFTLYHNRSDILKLFKSKNKDLSQIPDQAVENKENTTLEEKEAAPLLSTKSLLNYI SSLKFPEAPTNLVEPKLDTVVNSTSFGYKEQGAKKPITNRRATSDEVGVWVSLNYINYLLNVNLLVYNFMQDKDYSKELR IVKSRLLPQDIRNILNNLETYNNYLFSKSSSTEVIFPTNHKWLEKFIKIEKKPSAMMITEQDKPLILENLNYLIDCLYSE KFMQEFVNQDV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29248; Mature: 29248
Theoretical pI: Translated: 8.78; Mature: 8.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHKFDSLFKSKNIFFIAIVIFVLSSFTLYHNRSDILKLFKSKNKDLSQIPDQAVENKENT CCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHCCHHHHCCCCCC TLEEKEAAPLLSTKSLLNYISSLKFPEAPTNLVEPKLDTVVNSTSFGYKEQGAKKPITNR CCHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHCCHHHHHHCCCCCCCHHCCCCCCCCCC RATSDEVGVWVSLNYINYLLNVNLLVYNFMQDKDYSKELRIVKSRLLPQDIRNILNNLET CCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHH YNNYLFSKSSSTEVIFPTNHKWLEKFIKIEKKPSAMMITEQDKPLILENLNYLIDCLYSE HHHHHCCCCCCCEEEECCCHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHH KFMQEFVNQDV HHHHHHHCCCC >Mature Secondary Structure MHKFDSLFKSKNIFFIAIVIFVLSSFTLYHNRSDILKLFKSKNKDLSQIPDQAVENKENT CCHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHCCHHHHCCCCCC TLEEKEAAPLLSTKSLLNYISSLKFPEAPTNLVEPKLDTVVNSTSFGYKEQGAKKPITNR CCHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHCCHHHHHHCCCCCCCHHCCCCCCCCCC RATSDEVGVWVSLNYINYLLNVNLLVYNFMQDKDYSKELRIVKSRLLPQDIRNILNNLET CCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHH YNNYLFSKSSSTEVIFPTNHKWLEKFIKIEKKPSAMMITEQDKPLILENLNYLIDCLYSE HHHHHCCCCCCCEEEECCCHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHH KFMQEFVNQDV HHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9823893 [H]