Click here to switch to the map view.

The map label for this gene is cmk

Identifier: 229586798

GI number: 229586798

Start: 695780

End: 696439

Strand: Direct

Name: cmk

Synonym: RAF_ORF0662

Alternate gene names: 229586798

Gene position: 695780-696439 (Clockwise)

Preceding gene: 229586797

Following gene: 229586799

Centisome position: 54.42

GC content: 33.18

Gene sequence:

>660_bases
ATGGTGGATTTAAAAACTAAAGCCTTTGATATTTCTCAAAATTTCACTATTTCTCTTGACGGTCCTGCTGCTTCAGGTAA
AGGGACTATCGGTTTAATACTGGCTAAGAAATTTTCTCTTAAATATTTTCAGTCAAGTATTGTTTATAGGCAGCTTGCGT
TTGACTGTATTAGTCAAAAAATAGATGTCACTGATATAGATGCGGTAATTGCTTTATCTAAAGAATTAAAACTCGACAAT
AATTTTGACTTAGAGAATGAGAATATAGGAAATATAGCATCGCAAATTGCCGTAATAAGTGAAATTAGAAATAATCTAAA
CAAATACCTGATTAATCTAGTAAAAACAACACCTAGAATGATTATGGAGGGTAGGGATATAGGCACCGTTGTTGCACCTG
ACGCCGATTTAAAGATTTTTATAACCGCAAATCCTCAAATTAGGGCTGAAAGACGATATAAGCAGTTGCAAGCAAAAGGA
AAAACATGTATACTCGATGAGATTTTACGGCAAATAATTTTGCGAGATAAAAGAGATAAAGAGCGAAAAGCTGCACCGTT
ATTACCGGCTTCAGATGCTTTAATTATCGATACTTCAAAGCTTTCGGCTATGGAAGTTGTAGAAGAAGTAACAAATTATA
TAAAGAATAAAATAACTTGA

Upstream 100 bases:

>100_bases
TAGTTTTTAACCCTTGTTTTTTTAAAAAATTCATTAATGTACTAGATTTCAAGCTTTATTTCCATTATTTATAATATTTT
ATTATTTAGTCTATAATTTT

Downstream 100 bases:

>100_bases
AAAAGTGCTAGGTTATTTTATTCGATTGTATGGCGTTATTGCATGGCTAGTATGTCATTCTCGCGTAGGCGGGAATCCAG
AAAAAGCGAAATTGAGCTTT

Product: cytidylate kinase

Products: NA

Alternate protein names: CK; Cytidine monophosphate kinase; CMP kinase

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MVDLKTKAFDISQNFTISLDGPAASGKGTIGLILAKKFSLKYFQSSIVYRQLAFDCISQKIDVTDIDAVIALSKELKLDN
NFDLENENIGNIASQIAVISEIRNNLNKYLINLVKTTPRMIMEGRDIGTVVAPDADLKIFITANPQIRAERRYKQLQAKG
KTCILDEILRQIILRDKRDKERKAAPLLPASDALIIDTSKLSAMEVVEEVTNYIKNKIT

Sequences:

>Translated_219_residues
MVDLKTKAFDISQNFTISLDGPAASGKGTIGLILAKKFSLKYFQSSIVYRQLAFDCISQKIDVTDIDAVIALSKELKLDN
NFDLENENIGNIASQIAVISEIRNNLNKYLINLVKTTPRMIMEGRDIGTVVAPDADLKIFITANPQIRAERRYKQLQAKG
KTCILDEILRQIILRDKRDKERKAAPLLPASDALIIDTSKLSAMEVVEEVTNYIKNKIT
>Mature_219_residues
MVDLKTKAFDISQNFTISLDGPAASGKGTIGLILAKKFSLKYFQSSIVYRQLAFDCISQKIDVTDIDAVIALSKELKLDN
NFDLENENIGNIASQIAVISEIRNNLNKYLINLVKTTPRMIMEGRDIGTVVAPDADLKIFITANPQIRAERRYKQLQAKG
KTCILDEILRQIILRDKRDKERKAAPLLPASDALIIDTSKLSAMEVVEEVTNYIKNKIT

Specific function: ATP, Datp, And GTP Are Equally Effective As Phosphate Donors. CMP And Dcmp Are The Best Phosphate Acceptors. [C]

COG id: COG0283

COG function: function code F; Cytidylate kinase

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytidylate kinase family. Type 1 subfamily

Homologues:

Organism=Escherichia coli, GI1787139, Length=219, Percent_Identity=34.2465753424658, Blast_Score=142, Evalue=2e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): KCY_RICAE (C3PNP6)

Other databases:

- EMBL:   CP001612
- RefSeq:   YP_002845299.1
- GeneID:   7815153
- GenomeReviews:   CP001612_GR
- KEGG:   raf:RAF_ORF0662
- OMA:   DIGTVIC
- ProtClustDB:   PRK00023
- GO:   GO:0005737
- HAMAP:   MF_00238
- InterPro:   IPR003136
- InterPro:   IPR011994
- PANTHER:   PTHR21299:SF2
- TIGRFAMs:   TIGR00017

Pfam domain/function: PF02224 Cytidylate_kin

EC number: =2.7.4.14

Molecular weight: Translated: 24502; Mature: 24502

Theoretical pI: Translated: 9.33; Mature: 9.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVDLKTKAFDISQNFTISLDGPAASGKGTIGLILAKKFSLKYFQSSIVYRQLAFDCISQK
CCCCCCCEEECCCCEEEEECCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCC
IDVTDIDAVIALSKELKLDNNFDLENENIGNIASQIAVISEIRNNLNKYLINLVKTTPRM
CCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
IMEGRDIGTVVAPDADLKIFITANPQIRAERRYKQLQAKGKTCILDEILRQIILRDKRDK
HHCCCCCCEEEECCCCEEEEEECCCCHHHHHHHHHHHHCCCEEHHHHHHHHHHHCCCCCH
ERKAAPLLPASDALIIDTSKLSAMEVVEEVTNYIKNKIT
HHHCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVDLKTKAFDISQNFTISLDGPAASGKGTIGLILAKKFSLKYFQSSIVYRQLAFDCISQK
CCCCCCCEEECCCCEEEEECCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCC
IDVTDIDAVIALSKELKLDNNFDLENENIGNIASQIAVISEIRNNLNKYLINLVKTTPRM
CCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
IMEGRDIGTVVAPDADLKIFITANPQIRAERRYKQLQAKGKTCILDEILRQIILRDKRDK
HHCCCCCCEEEECCCCEEEEEECCCCHHHHHHHHHHHHCCCEEHHHHHHHHHHHCCCCCH
ERKAAPLLPASDALIIDTSKLSAMEVVEEVTNYIKNKIT
HHHCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA