| Definition | Rickettsia africae ESF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_012633 |
| Length | 1,278,540 |
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The map label for this gene is 229586733
Identifier: 229586733
GI number: 229586733
Start: 610795
End: 612147
Strand: Direct
Name: 229586733
Synonym: RAF_ORF0582
Alternate gene names: NA
Gene position: 610795-612147 (Clockwise)
Preceding gene: 229586732
Following gene: 229586735
Centisome position: 47.77
GC content: 29.42
Gene sequence:
>1353_bases ATGGCAGGGATTATAACTAATATAAATGATACTATTAAAAAAAACGATGAAGTGACTGAGATATTGGCTGCAGTAAAAGA TAAAATAGTTGATATAAAAAACGTAGATAGGAGATTAGATACTTTGAATAAAAATATTGTTACTCCCGATCCTATTCAAC AATATTTACAATCTGAAGAATATATCACTAGTACGCTTGAAGTACTTGCCAGTAAAATTATTAGTGAAGTTGTAGAAAAT AAAGATACACAAAAATTAGTAGATAACTTGCATATCAATTTAGGACAAGATATAAAACTAATGCCTAGTTTAGCAGATAA GCTAAAGTTTGATGTCGCAAGGGCTGAAGCAGCACTTAAGGGTTTTGTACTTCCTCTAAATAAAGGAGGACCTTTTGATG CATTATCATTGATGGGTATAGAAGATGAAGAAGAAATCTTTGCCAATCCTATAAGAGCAACTAAAGAAGCATTAATAGCC GTAAGCGGAAAGTCTATACCTAAAGAGCAATATGCACAGGCTGTAAAAGATCAAGCTATAGAAATCTTAAAACAAGATCC TAAAAACACTCCAGACAAACTTGAGAAATATGAAAAATTTATTATGCAAGGAGATAAAAACCAGAAATTTAATAAAAATA GTAAGCAGTTTATCCCAAGAGTAAATCAATTATCTCAAGTGGAACTTAAGGCATTACAAAATGCAGCCACTTATACGGTA CAGCAGATTAGTAATAGATTAGAAAAAAATAATAACATTAGTAAGCAATTAGAACAAATTATTATACTTACTAACTCATC AGGCATAAAGAATCCTGAAATAATAAGGGAATTAAATAAGTTAGATTCTACTTATCTAACTGAGAATAGTACTAAAATAG CCAATGAATTAAAAGATATTAATGATAGAGGTACTTCTTTAGGGGAAAAATTTAAGCAGATATTTACAGGTAGAAACTAT TTGGAAAAAAGATTAGGAAAAGTTGTAGATAAATATATTACTCTGAGTGATGAATATGTAGTGAAGACAATTAATGATAA AATCTTTTCAAATGCTTTAACAAACCCTGACATTGCTGCAGGTCTAACAAAATTTTTAAATGAAAATAAAGATAAAGTAG CAACTAATCCTGAATTTAAAAATTTAATTCCTGTTACGGGTGAGTCTATTATAGTTCAACCGCAACAAATTAATAATTTT AATTTAGCGGAACTCAGAAAAATCAATCCAATAGCATTTGATAAAACCATATTTGAAGATTCAATAAAACTAAGAAGTTC TAATATAAAACCTCCGCACATCACTCCTAATCCTTCTACTAAAAATCAGGAAGCAGTAAGAAGAAAGGGTTAA
Upstream 100 bases:
>100_bases GGCATAGTAAGTAGTGATTTATATGATAATATAGTTGCGAATTTTTAAAAAGTTTGATAATTTAGTTCATTATATCAAAT AACTTAATAATGAGTATTAT
Downstream 100 bases:
>100_bases ATTTTAATATAACTTCATCATTGTGAGGAGGCGTTGTTATATTGCTTCTATGTCATTCCCGCGAAAGCGGAAATCTAGAT TTTTTATTGTCACCCCGTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 450; Mature: 449
Protein sequence:
>450_residues MAGIITNINDTIKKNDEVTEILAAVKDKIVDIKNVDRRLDTLNKNIVTPDPIQQYLQSEEYITSTLEVLASKIISEVVEN KDTQKLVDNLHINLGQDIKLMPSLADKLKFDVARAEAALKGFVLPLNKGGPFDALSLMGIEDEEEIFANPIRATKEALIA VSGKSIPKEQYAQAVKDQAIEILKQDPKNTPDKLEKYEKFIMQGDKNQKFNKNSKQFIPRVNQLSQVELKALQNAATYTV QQISNRLEKNNNISKQLEQIIILTNSSGIKNPEIIRELNKLDSTYLTENSTKIANELKDINDRGTSLGEKFKQIFTGRNY LEKRLGKVVDKYITLSDEYVVKTINDKIFSNALTNPDIAAGLTKFLNENKDKVATNPEFKNLIPVTGESIIVQPQQINNF NLAELRKINPIAFDKTIFEDSIKLRSSNIKPPHITPNPSTKNQEAVRRKG
Sequences:
>Translated_450_residues MAGIITNINDTIKKNDEVTEILAAVKDKIVDIKNVDRRLDTLNKNIVTPDPIQQYLQSEEYITSTLEVLASKIISEVVEN KDTQKLVDNLHINLGQDIKLMPSLADKLKFDVARAEAALKGFVLPLNKGGPFDALSLMGIEDEEEIFANPIRATKEALIA VSGKSIPKEQYAQAVKDQAIEILKQDPKNTPDKLEKYEKFIMQGDKNQKFNKNSKQFIPRVNQLSQVELKALQNAATYTV QQISNRLEKNNNISKQLEQIIILTNSSGIKNPEIIRELNKLDSTYLTENSTKIANELKDINDRGTSLGEKFKQIFTGRNY LEKRLGKVVDKYITLSDEYVVKTINDKIFSNALTNPDIAAGLTKFLNENKDKVATNPEFKNLIPVTGESIIVQPQQINNF NLAELRKINPIAFDKTIFEDSIKLRSSNIKPPHITPNPSTKNQEAVRRKG >Mature_449_residues AGIITNINDTIKKNDEVTEILAAVKDKIVDIKNVDRRLDTLNKNIVTPDPIQQYLQSEEYITSTLEVLASKIISEVVENK DTQKLVDNLHINLGQDIKLMPSLADKLKFDVARAEAALKGFVLPLNKGGPFDALSLMGIEDEEEIFANPIRATKEALIAV SGKSIPKEQYAQAVKDQAIEILKQDPKNTPDKLEKYEKFIMQGDKNQKFNKNSKQFIPRVNQLSQVELKALQNAATYTVQ QISNRLEKNNNISKQLEQIIILTNSSGIKNPEIIRELNKLDSTYLTENSTKIANELKDINDRGTSLGEKFKQIFTGRNYL EKRLGKVVDKYITLSDEYVVKTINDKIFSNALTNPDIAAGLTKFLNENKDKVATNPEFKNLIPVTGESIIVQPQQINNFN LAELRKINPIAFDKTIFEDSIKLRSSNIKPPHITPNPSTKNQEAVRRKG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50684; Mature: 50552
Theoretical pI: Translated: 9.36; Mature: 9.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGIITNINDTIKKNDEVTEILAAVKDKIVDIKNVDRRLDTLNKNIVTPDPIQQYLQSEE CCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH YITSTLEVLASKIISEVVENKDTQKLVDNLHINLGQDIKLMPSLADKLKFDVARAEAALK HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH GFVLPLNKGGPFDALSLMGIEDEEEIFANPIRATKEALIAVSGKSIPKEQYAQAVKDQAI CEEEECCCCCCCCHHHCCCCCCHHHHHHCHHHHHHHHHEEECCCCCCHHHHHHHHHHHHH EILKQDPKNTPDKLEKYEKFIMQGDKNQKFNKNSKQFIPRVNQLSQVELKALQNAATYTV HHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH QQISNRLEKNNNISKQLEQIIILTNSSGIKNPEIIRELNKLDSTYLTENSTKIANELKDI HHHHHHHHCCCCHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH NDRGTSLGEKFKQIFTGRNYLEKRLGKVVDKYITLSDEYVVKTINDKIFSNALTNPDIAA HHCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHH GLTKFLNENKDKVATNPEFKNLIPVTGESIIVQPQQINNFNLAELRKINPIAFDKTIFED HHHHHHCCCCCCCCCCCCHHCCCCCCCCEEEECCHHCCCCCHHHHHHCCCHHHHHHHHHH SIKLRSSNIKPPHITPNPSTKNQEAVRRKG HHHHHCCCCCCCCCCCCCCCCCHHHHHCCC >Mature Secondary Structure AGIITNINDTIKKNDEVTEILAAVKDKIVDIKNVDRRLDTLNKNIVTPDPIQQYLQSEE CCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH YITSTLEVLASKIISEVVENKDTQKLVDNLHINLGQDIKLMPSLADKLKFDVARAEAALK HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH GFVLPLNKGGPFDALSLMGIEDEEEIFANPIRATKEALIAVSGKSIPKEQYAQAVKDQAI CEEEECCCCCCCCHHHCCCCCCHHHHHHCHHHHHHHHHEEECCCCCCHHHHHHHHHHHHH EILKQDPKNTPDKLEKYEKFIMQGDKNQKFNKNSKQFIPRVNQLSQVELKALQNAATYTV HHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH QQISNRLEKNNNISKQLEQIIILTNSSGIKNPEIIRELNKLDSTYLTENSTKIANELKDI HHHHHHHHCCCCHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHH NDRGTSLGEKFKQIFTGRNYLEKRLGKVVDKYITLSDEYVVKTINDKIFSNALTNPDIAA HHCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHH GLTKFLNENKDKVATNPEFKNLIPVTGESIIVQPQQINNFNLAELRKINPIAFDKTIFED HHHHHHCCCCCCCCCCCCHHCCCCCCCCEEEECCHHCCCCCHHHHHHCCCHHHHHHHHHH SIKLRSSNIKPPHITPNPSTKNQEAVRRKG HHHHHCCCCCCCCCCCCCCCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9823893 [H]