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The map label for this gene is mccF [C]

Identifier: 229586674

GI number: 229586674

Start: 540955

End: 541902

Strand: Direct

Name: mccF [C]

Synonym: RAF_ORF0511

Alternate gene names: 229586674

Gene position: 540955-541902 (Clockwise)

Preceding gene: 229586673

Following gene: 229586676

Centisome position: 42.31

GC content: 32.59

Gene sequence:

>948_bases
ATGATTCTTAAAAATATATCTTTACTAATAATATTATTTTTTTCAATATCAACTTTTTCTGTTGGTCATAGTCTAAAAAA
TATCTCTATTACTGTTGTTGCTCCGGCAACAGAAGCGGATAATAAAACCTTGTCGGATTTAAAAAATATTAATGGACTAA
ATTTACAAATTTCTTCTCAGTGTTTTGCTAAAGGTAAGCTACCCTTTCTTGCAAGTAGCGATGAAGTAAGATTTAATTGC
CTGCGGGATGCATTATTTGATGAGTCTGATAATATAGTATGGAGTTTACGAGGTGGTTACGGCTCTGCGAGAATAATTCC
CGATTTACTAAAGCTATCAAAACCAAATAAAGAGAAATTCTTTATAGGATATAGCGATATAACAGCGTTACATCTTTTTC
TATCACAAGAATGGGGCTGGAAAACTATTCACGGCAGTAATATAGCCGATCTCTTAAAGCCGGAACAAGAGCAAGGTAAT
TTTACCAAGCTTGCTGAAATATTAAAAGGTAAAGTAAAGCAGGTTACTATAGATAATTTAGTGCCTCTTAACGATATAGC
AAAATCAAGTGATCTTGTTAACGGCAAACTAACAGGCGGTAACTTAACTATGGTGCAGACTAGTATAGGAACGAGTTGGC
AAATAAAGACTAAGGGCAAAATTCTTTTTTTAGAAGATGTGAATGTAGTTCCTTTTAGATTAGATCGTGCGCTTTTACAC
TTAAAGCAAGCAGGGTTAATTGAGGATGTTAAGGCTATAATATTTGGTTCATTTGGTAAAGATCTTGATGCCACAATGTT
AGTGCTTCGTAATTTTGCAGATAGTTTAGATATACCGGTATTTAAAACAAATAGATTCGGTCATGAAAAAATTAACGATC
CGATTATTTATAATACGAATAGTAAGATTATTAAAAGTAAAGAATTTAAGTTAGTGATGGGGTTGTAA

Upstream 100 bases:

>100_bases
GGTATCTAGAAAAAATAAAATAAAGACTGGATGCCGTGGTCAAGCGCCACGGCATGACATAGTAGGTTTATCTGTTCAAC
AATACCTATCAATTATATTC

Downstream 100 bases:

>100_bases
GCACTATTGCGAGCAGTTGCTAAGCCGTCATTGCGAGCGACTGAAAGCCTTGTTGCATGGTTTGTTTATGTCATATTCCC
GCGTAGGCGGGAATCCTAGG

Product: Microcin C7 self-immunity protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 315; Mature: 315

Protein sequence:

>315_residues
MILKNISLLIILFFSISTFSVGHSLKNISITVVAPATEADNKTLSDLKNINGLNLQISSQCFAKGKLPFLASSDEVRFNC
LRDALFDESDNIVWSLRGGYGSARIIPDLLKLSKPNKEKFFIGYSDITALHLFLSQEWGWKTIHGSNIADLLKPEQEQGN
FTKLAEILKGKVKQVTIDNLVPLNDIAKSSDLVNGKLTGGNLTMVQTSIGTSWQIKTKGKILFLEDVNVVPFRLDRALLH
LKQAGLIEDVKAIIFGSFGKDLDATMLVLRNFADSLDIPVFKTNRFGHEKINDPIIYNTNSKIIKSKEFKLVMGL

Sequences:

>Translated_315_residues
MILKNISLLIILFFSISTFSVGHSLKNISITVVAPATEADNKTLSDLKNINGLNLQISSQCFAKGKLPFLASSDEVRFNC
LRDALFDESDNIVWSLRGGYGSARIIPDLLKLSKPNKEKFFIGYSDITALHLFLSQEWGWKTIHGSNIADLLKPEQEQGN
FTKLAEILKGKVKQVTIDNLVPLNDIAKSSDLVNGKLTGGNLTMVQTSIGTSWQIKTKGKILFLEDVNVVPFRLDRALLH
LKQAGLIEDVKAIIFGSFGKDLDATMLVLRNFADSLDIPVFKTNRFGHEKINDPIIYNTNSKIIKSKEFKLVMGL
>Mature_315_residues
MILKNISLLIILFFSISTFSVGHSLKNISITVVAPATEADNKTLSDLKNINGLNLQISSQCFAKGKLPFLASSDEVRFNC
LRDALFDESDNIVWSLRGGYGSARIIPDLLKLSKPNKEKFFIGYSDITALHLFLSQEWGWKTIHGSNIADLLKPEQEQGN
FTKLAEILKGKVKQVTIDNLVPLNDIAKSSDLVNGKLTGGNLTMVQTSIGTSWQIKTKGKILFLEDVNVVPFRLDRALLH
LKQAGLIEDVKAIIFGSFGKDLDATMLVLRNFADSLDIPVFKTNRFGHEKINDPIIYNTNSKIIKSKEFKLVMGL

Specific function: L,D-carboxypeptidase [C]

COG id: COG1619

COG function: function code V; Uncharacterized proteins, homologs of microcin C7 resistance protein MccF

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S66 family [H]

Homologues:

Organism=Escherichia coli, GI1787441, Length=221, Percent_Identity=31.6742081447964, Blast_Score=87, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003507 [H]

Pfam domain/function: PF02016 Peptidase_S66 [H]

EC number: NA

Molecular weight: Translated: 34998; Mature: 34998

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILKNISLLIILFFSISTFSVGHSLKNISITVVAPATEADNKTLSDLKNINGLNLQISSQ
CCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCHHHHHHCCCCCEEEECCC
CFAKGKLPFLASSDEVRFNCLRDALFDESDNIVWSLRGGYGSARIIPDLLKLSKPNKEKF
HHHCCCCCEEECCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHCCCCCCCEE
FIGYSDITALHLFLSQEWGWKTIHGSNIADLLKPEQEQGNFTKLAEILKGKVKQVTIDNL
EEEEHHHHHHEEEHHCCCCCEEECCCCHHHHHCCCCCCCCHHHHHHHHCCCCEEEEECCC
VPLNDIAKSSDLVNGKLTGGNLTMVQTSIGTSWQIKTKGKILFLEDVNVVPFRLDRALLH
CCHHHHHCCCCCCCCEEECCEEEEEEECCCCEEEEEECCEEEEEECCCCCCHHHHHHHHH
LKQAGLIEDVKAIIFGSFGKDLDATMLVLRNFADSLDIPVFKTNRFGHEKINDPIIYNTN
HHHCCHHHHHHHHEECCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCHHCCCCEEECCC
SKIIKSKEFKLVMGL
CCEEECCCEEEEECC
>Mature Secondary Structure
MILKNISLLIILFFSISTFSVGHSLKNISITVVAPATEADNKTLSDLKNINGLNLQISSQ
CCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCHHHHHHCCCCCEEEECCC
CFAKGKLPFLASSDEVRFNCLRDALFDESDNIVWSLRGGYGSARIIPDLLKLSKPNKEKF
HHHCCCCCEEECCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHCCCCCCCEE
FIGYSDITALHLFLSQEWGWKTIHGSNIADLLKPEQEQGNFTKLAEILKGKVKQVTIDNL
EEEEHHHHHHEEEHHCCCCCEEECCCCHHHHHCCCCCCCCHHHHHHHHCCCCEEEEECCC
VPLNDIAKSSDLVNGKLTGGNLTMVQTSIGTSWQIKTKGKILFLEDVNVVPFRLDRALLH
CCHHHHHCCCCCCCCEEECCEEEEEEECCCCEEEEEECCEEEEEECCCCCCHHHHHHHHH
LKQAGLIEDVKAIIFGSFGKDLDATMLVLRNFADSLDIPVFKTNRFGHEKINDPIIYNTN
HHHCCHHHHHHHHEECCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCHHCCCCEEECCC
SKIIKSKEFKLVMGL
CCEEECCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11557893 [H]