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The map label for this gene is 229586651

Identifier: 229586651

GI number: 229586651

Start: 517389

End: 518912

Strand: Direct

Name: 229586651

Synonym: RAF_ORF0488

Alternate gene names: NA

Gene position: 517389-518912 (Clockwise)

Preceding gene: 229586649

Following gene: 229586652

Centisome position: 40.47

GC content: 35.83

Gene sequence:

>1524_bases
ATGAATTCTACCAATCAATTGCAAAATAATAGCTTAACTAATTCTTGGCTTAAGCTTGGTATTTTATCCTTGGGATTTGC
GGGTTTATATTCAATTATTTTGGTGGTACTACGTACCCCGCAATTATCAAGCTTTTTCCCAAATCCGCATATTTTCAAAT
CTGCTTTAATTATTCATGTTAATTTATCGGTATTGATTTGGTTATTGTCCGTTACGGCTAGTGTTTGGGGAGGTGAAACG
TCATTGCGAGGAGAGGCAAAGCCTCGACGCGGCAATCTCATGAAACAATACAAAATTTCTGAGATTGCCACGCTCTCTAC
GTTCGCTTGCAATGACGTGTTTCGCCTTTACCCCAAACTTGCTTTTCTAGCTACTCTTCTAATCGCCATCTCCCCAATAG
CTGGGCATAATCCGGTGATGAATAATTATATACCGATGCTTGAAAATATCGTATTTATTGGGGGGTTAAGCTTATTTGGT
GTTACATTGCTATTGTACGCTATAAATATTTTATATTTCTTCGATTGGACGAACTTAAATAGTCTAGTTAATTTTACCGT
ATTATCGACTATTATAATGTTTATTTTAAGCTTTGTTTGTTTTGGATGGTCTTATAATGGCTTGCAAAACATCATTCAAA
TTATTCCAATCGAGATAGAATTTTATTATGAATTACTTTTTTGGAGCGGAGGTCATTTACTGCAATTTATATATACTCAA
ATATTAATATTTATTTGGGTTAGTTTATTTAGAGAGTTAATAGCTAGAGAAGTGAAATGTCAAAAATTCTATCTTTTCTT
ACTTTATTTAAATTTTATTTTCGGAATTCTTACACTTTTCGGTCATATATTTTATGATATTATCGATGGAGCCTTCAAAG
TATTCTATACAAATCATATGAAATATCTAGGCGGCATTGCTCCTGTTTTATGTTTAATAGGTATGGGGGTTGAGTTGGTG
TGGGTATTTGTCATCCCGCGGGATGACACGGTTACAATAAATGACAGAGTAATCAAAACCATCTTACTTTGCTCTATTAC
TTTATTCTTACTTGGCGGGCTTATAGCAATGAATATCACAGGGATAAATGTAGCAATTCCTGCTCATTATCACGGGTCTA
TAGTAGGGATTAGCATTGCTTGTATGGGGTGTAGTTATTTGGGTATTGGGAGGTATCAACGTCATTGTGAGCGACTAAAA
AGAGCGTGGCAATCTCATGAGGTAATACAAAAACTCCCTAGATTATCGTGTCGGCACTTCGTGCCTCCTCGCAATGACAA
TATTATTAATTTTACATTTTACCTCCTAACATTCGGGCAGATTCTGCACATACTAGGTCTAGCATTCGCCGGTGGTTACG
GTGTTATGCGGAAAGACCCAAATAGTGTAATGCCGATGTCAGCTAAGCTATTAATGGGAATGATGGGCGGAGGAGGGGTT
ATTGCTATAGTAGGCGGCTTGATGTTTGTATATATTTGTGTTAAAGTAATATTTTTTAAAAGTATAAAACTAGCACATGA
GTAA

Upstream 100 bases:

>100_bases
TATTAATATCGTATGTTAGCTTCTAAAGCAAATAAAAAAATATTGCTTATTTAAATACTGTGCGCTATTTGTAGATTATA
TTTAATATTTACCTGTAGTT

Downstream 100 bases:

>100_bases
ACCAACTAGAGAAGAAGCTACAGAGGCAGTAAGAACGTTACTAAAATTCATTGGTGAAGATCCAAGCAGAGAAGGGTTGC
TTCAAACGCCTGATAGAGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 507; Mature: 507

Protein sequence:

>507_residues
MNSTNQLQNNSLTNSWLKLGILSLGFAGLYSIILVVLRTPQLSSFFPNPHIFKSALIIHVNLSVLIWLLSVTASVWGGET
SLRGEAKPRRGNLMKQYKISEIATLSTFACNDVFRLYPKLAFLATLLIAISPIAGHNPVMNNYIPMLENIVFIGGLSLFG
VTLLLYAINILYFFDWTNLNSLVNFTVLSTIIMFILSFVCFGWSYNGLQNIIQIIPIEIEFYYELLFWSGGHLLQFIYTQ
ILIFIWVSLFRELIAREVKCQKFYLFLLYLNFIFGILTLFGHIFYDIIDGAFKVFYTNHMKYLGGIAPVLCLIGMGVELV
WVFVIPRDDTVTINDRVIKTILLCSITLFLLGGLIAMNITGINVAIPAHYHGSIVGISIACMGCSYLGIGRYQRHCERLK
RAWQSHEVIQKLPRLSCRHFVPPRNDNIINFTFYLLTFGQILHILGLAFAGGYGVMRKDPNSVMPMSAKLLMGMMGGGGV
IAIVGGLMFVYICVKVIFFKSIKLAHE

Sequences:

>Translated_507_residues
MNSTNQLQNNSLTNSWLKLGILSLGFAGLYSIILVVLRTPQLSSFFPNPHIFKSALIIHVNLSVLIWLLSVTASVWGGET
SLRGEAKPRRGNLMKQYKISEIATLSTFACNDVFRLYPKLAFLATLLIAISPIAGHNPVMNNYIPMLENIVFIGGLSLFG
VTLLLYAINILYFFDWTNLNSLVNFTVLSTIIMFILSFVCFGWSYNGLQNIIQIIPIEIEFYYELLFWSGGHLLQFIYTQ
ILIFIWVSLFRELIAREVKCQKFYLFLLYLNFIFGILTLFGHIFYDIIDGAFKVFYTNHMKYLGGIAPVLCLIGMGVELV
WVFVIPRDDTVTINDRVIKTILLCSITLFLLGGLIAMNITGINVAIPAHYHGSIVGISIACMGCSYLGIGRYQRHCERLK
RAWQSHEVIQKLPRLSCRHFVPPRNDNIINFTFYLLTFGQILHILGLAFAGGYGVMRKDPNSVMPMSAKLLMGMMGGGGV
IAIVGGLMFVYICVKVIFFKSIKLAHE
>Mature_507_residues
MNSTNQLQNNSLTNSWLKLGILSLGFAGLYSIILVVLRTPQLSSFFPNPHIFKSALIIHVNLSVLIWLLSVTASVWGGET
SLRGEAKPRRGNLMKQYKISEIATLSTFACNDVFRLYPKLAFLATLLIAISPIAGHNPVMNNYIPMLENIVFIGGLSLFG
VTLLLYAINILYFFDWTNLNSLVNFTVLSTIIMFILSFVCFGWSYNGLQNIIQIIPIEIEFYYELLFWSGGHLLQFIYTQ
ILIFIWVSLFRELIAREVKCQKFYLFLLYLNFIFGILTLFGHIFYDIIDGAFKVFYTNHMKYLGGIAPVLCLIGMGVELV
WVFVIPRDDTVTINDRVIKTILLCSITLFLLGGLIAMNITGINVAIPAHYHGSIVGISIACMGCSYLGIGRYQRHCERLK
RAWQSHEVIQKLPRLSCRHFVPPRNDNIINFTFYLLTFGQILHILGLAFAGGYGVMRKDPNSVMPMSAKLLMGMMGGGGV
IAIVGGLMFVYICVKVIFFKSIKLAHE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To A.aeolicus AQ_155 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000883 [H]

Pfam domain/function: PF00115 COX1 [H]

EC number: NA

Molecular weight: Translated: 57149; Mature: 57149

Theoretical pI: Translated: 9.31; Mature: 9.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSTNQLQNNSLTNSWLKLGILSLGFAGLYSIILVVLRTPQLSSFFPNPHIFKSALIIHV
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCHHHHHHHEEEE
NLSVLIWLLSVTASVWGGETSLRGEAKPRRGNLMKQYKISEIATLSTFACNDVFRLYPKL
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFLATLLIAISPIAGHNPVMNNYIPMLENIVFIGGLSLFGVTLLLYAINILYFFDWTNLN
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHH
SLVNFTVLSTIIMFILSFVCFGWSYNGLQNIIQIIPIEIEFYYELLFWSGGHLLQFIYTQ
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
ILIFIWVSLFRELIAREVKCQKFYLFLLYLNFIFGILTLFGHIFYDIIDGAFKVFYTNHM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KYLGGIAPVLCLIGMGVELVWVFVIPRDDTVTINDRVIKTILLCSITLFLLGGLIAMNIT
HHHHHHHHHHHHHHCCCEEEEEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHEEC
GINVAIPAHYHGSIVGISIACMGCSYLGIGRYQRHCERLKRAWQSHEVIQKLPRLSCRHF
CEEEEECCCCCCCCHHHHHHHHCCCHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCC
VPPRNDNIINFTFYLLTFGQILHILGLAFAGGYGVMRKDPNSVMPMSAKLLMGMMGGGGV
CCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCHH
IAIVGGLMFVYICVKVIFFKSIKLAHE
HHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNSTNQLQNNSLTNSWLKLGILSLGFAGLYSIILVVLRTPQLSSFFPNPHIFKSALIIHV
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCCCCCHHHHHHHEEEE
NLSVLIWLLSVTASVWGGETSLRGEAKPRRGNLMKQYKISEIATLSTFACNDVFRLYPKL
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFLATLLIAISPIAGHNPVMNNYIPMLENIVFIGGLSLFGVTLLLYAINILYFFDWTNLN
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCHH
SLVNFTVLSTIIMFILSFVCFGWSYNGLQNIIQIIPIEIEFYYELLFWSGGHLLQFIYTQ
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
ILIFIWVSLFRELIAREVKCQKFYLFLLYLNFIFGILTLFGHIFYDIIDGAFKVFYTNHM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KYLGGIAPVLCLIGMGVELVWVFVIPRDDTVTINDRVIKTILLCSITLFLLGGLIAMNIT
HHHHHHHHHHHHHHCCCEEEEEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHEEC
GINVAIPAHYHGSIVGISIACMGCSYLGIGRYQRHCERLKRAWQSHEVIQKLPRLSCRHF
CEEEEECCCCCCCCHHHHHHHHCCCHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCC
VPPRNDNIINFTFYLLTFGQILHILGLAFAGGYGVMRKDPNSVMPMSAKLLMGMMGGGGV
CCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCHH
IAIVGGLMFVYICVKVIFFKSIKLAHE
HHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]