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The map label for this gene is 229586633

Identifier: 229586633

GI number: 229586633

Start: 492953

End: 493870

Strand: Direct

Name: 229586633

Synonym: RAF_ORF0465

Alternate gene names: NA

Gene position: 492953-493870 (Clockwise)

Preceding gene: 229586632

Following gene: 229586634

Centisome position: 38.56

GC content: 32.14

Gene sequence:

>918_bases
ATGTTTATCTCTAATATTTTTCAAAAATTTTTTTCTTTTCTTTTTGTTTTATTCATCACAGCTGCAGTTTATGCGGATCA
AAAAAAAGTAGCAGTCATTGTGCCACTTGAACATGCCGCAATGACTGAGATTATATCAGGAATTAAAGAGTCGCTAAAAG
ATATAGATGCAGAAATTATAGTTAAAAATGCTCATGCTGATGCTAATATTTTACTTGCCATTATAAAGCAAATAATAGAT
CAGGATATTGATGTAATAATTCCAATAGGCACGACAGCCAGCCAAACTGTTATTTCTCATATAACAAATAAACCGCTTGT
TTGTGCTGCTGCTATGATTAATAGTAAAAACCTACCTTTAGTTACTGGTGTTAACGATGAGATAAAAATCACTGACACCA
TTAGTAAATTACCTTTTTTACAGAATATCACTTTAATTTATAGCAGTAGTGAGAAAGTTATACCTGAAGTAGAAATGTTA
AAATTATATGCTGGAAAAAACAATATTTCTCTGCACACGGTAATGATACAAAATTTCAATGATATGCCTGTGGCTGTAAA
AAATGCTCCTGAAAATACGCAGAGTTTTATAATTTTGAAAGATCATTTAATAGTCAGTGGGATTAATATTTTAAAGCAAG
AAGCATTTAAACGCCGTATTCCGATAATTGCTTCCGATGAAGGGTCGGTAATTAGCGGGGCAACTATTGCGGTAGGAGTA
CAAGAGAAGCAAATAGGCGTAGAAGCAGGTTTAATGGCAAAAAAAATCTTACAAGGAATAGAACCGAAAGATATTCCATT
TGGGGATATGAAAGACTTAACTTTATTTATTAACCTTAAATCATTTGTTAAACAAGATATTCTTACTAAAGAAAATTTAT
CCGTACTGCCTTTCGCGCGTAAAGAACTTGAAGAGTAG

Upstream 100 bases:

>100_bases
AAAATTGGTGTTGGCGTAGATAATTTTTTGCGTTTATGTGTTTGCTATATGCAAATTTAAATTTTGATTATTAAATTATA
ACTTATAACAGGATATTAAA

Downstream 100 bases:

>100_bases
TAACATGAACATTTTAGTTACTGCTCTTGAGCAATCCTTAATAATGTTGCCGCTTATTTTAGGGATGTATATAAGTTATC
GGATTCTCAAAATTACCGAT

Product: ABC-type transport system, periplasmic component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 305; Mature: 305

Protein sequence:

>305_residues
MFISNIFQKFFSFLFVLFITAAVYADQKKVAVIVPLEHAAMTEIISGIKESLKDIDAEIIVKNAHADANILLAIIKQIID
QDIDVIIPIGTTASQTVISHITNKPLVCAAAMINSKNLPLVTGVNDEIKITDTISKLPFLQNITLIYSSSEKVIPEVEML
KLYAGKNNISLHTVMIQNFNDMPVAVKNAPENTQSFIILKDHLIVSGINILKQEAFKRRIPIIASDEGSVISGATIAVGV
QEKQIGVEAGLMAKKILQGIEPKDIPFGDMKDLTLFINLKSFVKQDILTKENLSVLPFARKELEE

Sequences:

>Translated_305_residues
MFISNIFQKFFSFLFVLFITAAVYADQKKVAVIVPLEHAAMTEIISGIKESLKDIDAEIIVKNAHADANILLAIIKQIID
QDIDVIIPIGTTASQTVISHITNKPLVCAAAMINSKNLPLVTGVNDEIKITDTISKLPFLQNITLIYSSSEKVIPEVEML
KLYAGKNNISLHTVMIQNFNDMPVAVKNAPENTQSFIILKDHLIVSGINILKQEAFKRRIPIIASDEGSVISGATIAVGV
QEKQIGVEAGLMAKKILQGIEPKDIPFGDMKDLTLFINLKSFVKQDILTKENLSVLPFARKELEE
>Mature_305_residues
MFISNIFQKFFSFLFVLFITAAVYADQKKVAVIVPLEHAAMTEIISGIKESLKDIDAEIIVKNAHADANILLAIIKQIID
QDIDVIIPIGTTASQTVISHITNKPLVCAAAMINSKNLPLVTGVNDEIKITDTISKLPFLQNITLIYSSSEKVIPEVEML
KLYAGKNNISLHTVMIQNFNDMPVAVKNAPENTQSFIILKDHLIVSGINILKQEAFKRRIPIIASDEGSVISGATIAVGV
QEKQIGVEAGLMAKKILQGIEPKDIPFGDMKDLTLFINLKSFVKQDILTKENLSVLPFARKELEE

Specific function: Unknown

COG id: COG2984

COG function: function code R; ABC-type uncharacterized transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007487 [H]

Pfam domain/function: PF04392 ABC_sub_bind [H]

EC number: NA

Molecular weight: Translated: 33593; Mature: 33593

Theoretical pI: Translated: 6.05; Mature: 6.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFISNIFQKFFSFLFVLFITAAVYADQKKVAVIVPLEHAAMTEIISGIKESLKDIDAEII
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCEEEE
VKNAHADANILLAIIKQIIDQDIDVIIPIGTTASQTVISHITNKPLVCAAAMINSKNLPL
EECCCCCHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHCCCCCEEEHHHHCCCCCCE
VTGVNDEIKITDTISKLPFLQNITLIYSSSEKVIPEVEMLKLYAGKNNISLHTVMIQNFN
EECCCCCEEEEEHHHHCCHHHCEEEEEECCCCCCCHHHHHHEECCCCCCEEEEEEEECCC
DMPVAVKNAPENTQSFIILKDHLIVSGINILKQEAFKRRIPIIASDEGSVISGATIAVGV
CCCEEEECCCCCCCEEEEEECHHHHHHHHHHHHHHHHHCCCEEECCCCCEEECCEEEEEC
QEKQIGVEAGLMAKKILQGIEPKDIPFGDMKDLTLFINLKSFVKQDILTKENLSVLPFAR
CHHHHCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHCCCCCCCCCCCHH
KELEE
HHCCC
>Mature Secondary Structure
MFISNIFQKFFSFLFVLFITAAVYADQKKVAVIVPLEHAAMTEIISGIKESLKDIDAEII
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCEEEE
VKNAHADANILLAIIKQIIDQDIDVIIPIGTTASQTVISHITNKPLVCAAAMINSKNLPL
EECCCCCHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHCCCCCEEEHHHHCCCCCCE
VTGVNDEIKITDTISKLPFLQNITLIYSSSEKVIPEVEMLKLYAGKNNISLHTVMIQNFN
EECCCCCEEEEEHHHHCCHHHCEEEEEECCCCCCCHHHHHHEECCCCCCEEEEEEEECCC
DMPVAVKNAPENTQSFIILKDHLIVSGINILKQEAFKRRIPIIASDEGSVISGATIAVGV
CCCEEEECCCCCCCEEEEEECHHHHHHHHHHHHHHHHHCCCEEECCCCCEEECCEEEEEC
QEKQIGVEAGLMAKKILQGIEPKDIPFGDMKDLTLFINLKSFVKQDILTKENLSVLPFAR
CHHHHCHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHCCCCCCCCCCCHH
KELEE
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]