Definition Rickettsia africae ESF-5 chromosome, complete genome.
Accession NC_012633
Length 1,278,540

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The map label for this gene is 229586628

Identifier: 229586628

GI number: 229586628

Start: 486151

End: 487170

Strand: Direct

Name: 229586628

Synonym: RAF_ORF0460

Alternate gene names: NA

Gene position: 486151-487170 (Clockwise)

Preceding gene: 229586627

Following gene: 229586629

Centisome position: 38.02

GC content: 27.16

Gene sequence:

>1020_bases
ATGAAGCTAAAAGACATTATGAGTTCTTTTATTAATAAACCTAGAGAAATTGAAAAAGAATATCCTGGATTAGCTCAAAA
GCAAGAATCAGGATGCAATGTTTATGCCGGGTTAGGATGCAAAAATCAAGAAGTAAAATTTCGCAACTATTATGAGTTAC
TTAAAAAAATTCAACAAGGAGAAATAACTTTAGAAGTTCTAGAAAATTTAAGGAAATTAAAAATAGATGATAAAAAATCT
TTTCTAGCAGATGCAGCAGAGGTGATATCTAACAATATGTTACATGAGCTTAATGCAACAATAATGAAACATGCTTTAGA
TTTAGTTGATTCTAAAGATGCAGCTTTTTTACTTCGTAGAACAAAAGAGGATAGTATATTTCGAGATCTAATATATTTAG
AAGCAAAAGAAAACAGGTTTACTGTAGAAATTGATAAAAAAGGAACTTTGAAAATTAACTTTCCTAGTGGGATACTTGAG
CTTTACAAGCTATTAATTGATAATTTCTATTTGAAAAAATTTGAGGAGGAGGCATTGCAGAAAAAATTATATCAAGAATT
GTTCACTGATTTCAACATTCCTTTTGAAGAACTAATTGAAAAAAAGGAATTGCAGCAAAAATTATATCAAGAATTATTAC
CTGATTTCAACATTCCTTTTGAAGAACTAAATTTTTTTGAAAATTTTATTGAATGCTTAAAAGGCATGTATATTAAAAAT
AGTTTAGCACGAAGCATAATGAGTTTATTTGTAAGTAGAGATATTAAAGAACATGCTGTATGTGAAGAATTACTTGAATT
AGATACATTTAAAAAATTATTTGAGGCAAAAATGTCATTATATGGAACTTCTGCTGATTCTAAATTATTAGTGGTTGATT
ATGTATTAAATGATATACAAGGTGTTTATATTAGCAATTTAGCATCTTCAAGTATTTTAGATTTAGTAATGCATAGTCAA
TCGCATAATGAAACAATAGAATCAATAGAAATTTTGGGTAATAGCTCAGAACCAGTATGA

Upstream 100 bases:

>100_bases
CTCTCAATAAAAATTAATTTATCTTAATCTTCTATAAAGTACTTGTTAATATTTCTTAACTAAATATAATACTTCTTATT
AAATATAAGGAATAAATTAT

Downstream 100 bases:

>100_bases
CTTACTAGATACTGTTTTAAAGTTTTGATTATAAATATAGTAAAAACATCTAGAAGTTAATTTAATCTATCATTAATATT
TAAATAATTATAAGTGAGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 339; Mature: 339

Protein sequence:

>339_residues
MKLKDIMSSFINKPREIEKEYPGLAQKQESGCNVYAGLGCKNQEVKFRNYYELLKKIQQGEITLEVLENLRKLKIDDKKS
FLADAAEVISNNMLHELNATIMKHALDLVDSKDAAFLLRRTKEDSIFRDLIYLEAKENRFTVEIDKKGTLKINFPSGILE
LYKLLIDNFYLKKFEEEALQKKLYQELFTDFNIPFEELIEKKELQQKLYQELLPDFNIPFEELNFFENFIECLKGMYIKN
SLARSIMSLFVSRDIKEHAVCEELLELDTFKKLFEAKMSLYGTSADSKLLVVDYVLNDIQGVYISNLASSSILDLVMHSQ
SHNETIESIEILGNSSEPV

Sequences:

>Translated_339_residues
MKLKDIMSSFINKPREIEKEYPGLAQKQESGCNVYAGLGCKNQEVKFRNYYELLKKIQQGEITLEVLENLRKLKIDDKKS
FLADAAEVISNNMLHELNATIMKHALDLVDSKDAAFLLRRTKEDSIFRDLIYLEAKENRFTVEIDKKGTLKINFPSGILE
LYKLLIDNFYLKKFEEEALQKKLYQELFTDFNIPFEELIEKKELQQKLYQELLPDFNIPFEELNFFENFIECLKGMYIKN
SLARSIMSLFVSRDIKEHAVCEELLELDTFKKLFEAKMSLYGTSADSKLLVVDYVLNDIQGVYISNLASSSILDLVMHSQ
SHNETIESIEILGNSSEPV
>Mature_339_residues
MKLKDIMSSFINKPREIEKEYPGLAQKQESGCNVYAGLGCKNQEVKFRNYYELLKKIQQGEITLEVLENLRKLKIDDKKS
FLADAAEVISNNMLHELNATIMKHALDLVDSKDAAFLLRRTKEDSIFRDLIYLEAKENRFTVEIDKKGTLKINFPSGILE
LYKLLIDNFYLKKFEEEALQKKLYQELFTDFNIPFEELIEKKELQQKLYQELLPDFNIPFEELNFFENFIECLKGMYIKN
SLARSIMSLFVSRDIKEHAVCEELLELDTFKKLFEAKMSLYGTSADSKLLVVDYVLNDIQGVYISNLASSSILDLVMHSQ
SHNETIESIEILGNSSEPV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39355; Mature: 39355

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLKDIMSSFINKPREIEKEYPGLAQKQESGCNVYAGLGCKNQEVKFRNYYELLKKIQQG
CCHHHHHHHHCCCCHHHHHHCCCCCHHHCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHC
EITLEVLENLRKLKIDDKKSFLADAAEVISNNMLHELNATIMKHALDLVDSKDAAFLLRR
CCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
TKEDSIFRDLIYLEAKENRFTVEIDKKGTLKINFPSGILELYKLLIDNFYLKKFEEEALQ
CCHHHHHHHHHHHEECCCEEEEEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHH
KKLYQELFTDFNIPFEELIEKKELQQKLYQELLPDFNIPFEELNFFENFIECLKGMYIKN
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
SLARSIMSLFVSRDIKEHAVCEELLELDTFKKLFEAKMSLYGTSADSKLLVVDYVLNDIQ
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHH
GVYISNLASSSILDLVMHSQSHNETIESIEILGNSSEPV
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MKLKDIMSSFINKPREIEKEYPGLAQKQESGCNVYAGLGCKNQEVKFRNYYELLKKIQQG
CCHHHHHHHHCCCCHHHHHHCCCCCHHHCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHC
EITLEVLENLRKLKIDDKKSFLADAAEVISNNMLHELNATIMKHALDLVDSKDAAFLLRR
CCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
TKEDSIFRDLIYLEAKENRFTVEIDKKGTLKINFPSGILELYKLLIDNFYLKKFEEEALQ
CCHHHHHHHHHHHEECCCEEEEEECCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHH
KKLYQELFTDFNIPFEELIEKKELQQKLYQELLPDFNIPFEELNFFENFIECLKGMYIKN
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
SLARSIMSLFVSRDIKEHAVCEELLELDTFKKLFEAKMSLYGTSADSKLLVVDYVLNDIQ
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHH
GVYISNLASSSILDLVMHSQSHNETIESIEILGNSSEPV
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]