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The map label for this gene is 229586590

Identifier: 229586590

GI number: 229586590

Start: 440123

End: 440674

Strand: Direct

Name: 229586590

Synonym: RAF_ORF0414

Alternate gene names: NA

Gene position: 440123-440674 (Clockwise)

Preceding gene: 229586589

Following gene: 229586591

Centisome position: 34.42

GC content: 29.53

Gene sequence:

>552_bases
TTGGACAAACAGGATTATATAACGTTACTTGCTCATGAACATCTATATAATTGGACAGGGAAGAAAATACGTAATAACTT
AGAACGATTAAATTATTGGTGGAGTGAGGGATTTACCGATTATTATAGCAGGGTTTTAGCCTTACGTTCTAGTGTTATAA
CGCTTGAGGAATTTGTAGAAGAATTTAATAAATTCTTTGAGAATTATTATTTATCACCTGTTATAAATGAACCTAATAAT
TTAATCGAAACAGATTATTGGCAAGATTATGCAGTACAAAGATTGCCATATTATCGTGGATTTGTTTTGGCACTTTATTT
GGACAATTTCATTAAAGAGAATAATAAGAGTAAATCGCTGGATAATGTTATGCTTGATTTATTTAAAACCTCAAAAGAAC
AAGAATTTTCAAGCGATTATTTTAAAACAATAGTTAAAAATTATGTTCCAAAGGGCATAGATAAAGAGATAAACGAATAT
ATAGAACAAGGTAAAACTATAGATTTAGCTAATGTCGCTAAAGTGCTGCCGATCGAGAAAATAACAATGTAG

Upstream 100 bases:

>100_bases
TTTTCCTTATTATCTACTAAGCTTAATCGAGGGGAATCAACCTAGACATATAGGCAGAACGGGCTTAACTCATAGTTTTA
CTGCATTTATTCCTCAAGGT

Downstream 100 bases:

>100_bases
GCATATGATCGTGGTTTTGATAGAGATGCTTTAATAAATAATTATACAATAAAAGATATTGACGAAAATAGTAACGCTTA
TAAATCTGGACTTAGAAACA

Product: hypothetical protein

Products: NA

Alternate protein names: Peptidase

Number of amino acids: Translated: 183; Mature: 183

Protein sequence:

>183_residues
MDKQDYITLLAHEHLYNWTGKKIRNNLERLNYWWSEGFTDYYSRVLALRSSVITLEEFVEEFNKFFENYYLSPVINEPNN
LIETDYWQDYAVQRLPYYRGFVLALYLDNFIKENNKSKSLDNVMLDLFKTSKEQEFSSDYFKTIVKNYVPKGIDKEINEY
IEQGKTIDLANVAKVLPIEKITM

Sequences:

>Translated_183_residues
MDKQDYITLLAHEHLYNWTGKKIRNNLERLNYWWSEGFTDYYSRVLALRSSVITLEEFVEEFNKFFENYYLSPVINEPNN
LIETDYWQDYAVQRLPYYRGFVLALYLDNFIKENNKSKSLDNVMLDLFKTSKEQEFSSDYFKTIVKNYVPKGIDKEINEY
IEQGKTIDLANVAKVLPIEKITM
>Mature_183_residues
MDKQDYITLLAHEHLYNWTGKKIRNNLERLNYWWSEGFTDYYSRVLALRSSVITLEEFVEEFNKFFENYYLSPVINEPNN
LIETDYWQDYAVQRLPYYRGFVLALYLDNFIKENNKSKSLDNVMLDLFKTSKEQEFSSDYFKTIVKNYVPKGIDKEINEY
IEQGKTIDLANVAKVLPIEKITM

Specific function: Unknown

COG id: COG3975

COG function: function code R; Predicted protease with the C-terminal PDZ domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21955; Mature: 21955

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKQDYITLLAHEHLYNWTGKKIRNNLERLNYWWSEGFTDYYSRVLALRSSVITLEEFVE
CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
EFNKFFENYYLSPVINEPNNLIETDYWQDYAVQRLPYYRGFVLALYLDNFIKENNKSKSL
HHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHH
DNVMLDLFKTSKEQEFSSDYFKTIVKNYVPKGIDKEINEYIEQGKTIDLANVAKVLPIEK
HHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHHHHHCCHHH
ITM
HCC
>Mature Secondary Structure
MDKQDYITLLAHEHLYNWTGKKIRNNLERLNYWWSEGFTDYYSRVLALRSSVITLEEFVE
CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
EFNKFFENYYLSPVINEPNNLIETDYWQDYAVQRLPYYRGFVLALYLDNFIKENNKSKSL
HHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHH
DNVMLDLFKTSKEQEFSSDYFKTIVKNYVPKGIDKEINEYIEQGKTIDLANVAKVLPIEK
HHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCHHHHHHHCCHHH
ITM
HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA