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The map label for this gene is petA [H]

Identifier: 229586520

GI number: 229586520

Start: 361851

End: 362384

Strand: Direct

Name: petA [H]

Synonym: RAF_ORF0332

Alternate gene names: 229586520

Gene position: 361851-362384 (Clockwise)

Preceding gene: 229586519

Following gene: 229586521

Centisome position: 28.3

GC content: 41.57

Gene sequence:

>534_bases
ATGTCGGATACTGAAGATAATAAAAACAAACAAACAACACGTCGTGATTTTATGGTTCTAACGGCTAGTAGTGTTGCAGC
AATTGGGGCAGCATGTACTCTTTGGCCTCTCGTTGATTCTTTGAACCCTTCTGCGGACGTGCTAGCTTTATCATCAATTG
AGGTTGATTTATCAAATATTGCAGTAGGTCAAACAGTTACGGTTAAATGGCAAGGTAAACCGGTTTTTATTACTAACCGT
ACGCCTGACAAAATAGCTGAAGCAAGAGCCGTTAAAATGTCAGAGCTGATTGATCCTGAAGCAGATGAAGCACGTGTGAA
AGCAGGACATGATAATTGGCTGGTGACGATCGGGATCTGCACGCATTTAGGTTGTGTACCGCTTGCTAATCAAGGTGAAT
ATGATGGATGGTTCTGTCCGTGCCATGGTTCACAATATGATTCTTCAGGTAGAGTTAGAAGAGGTCCTGCTCCTTTAAAT
TTAGCTGTGCCGCCTTACACTTTTATTAGCGACAAAAAAATTAGAATAGGGTAA

Upstream 100 bases:

>100_bases
TATAATAAATCCTTATGAAGCACTAGAAAATCCAAATAATCTTAATAATACCCCAAGCGGTAGTAATAATAATCGTTAAT
TTATGTCACTTTAATATTAT

Downstream 100 bases:

>100_bases
TTATTTATGAATGAAGATATTACCCCTAAAAAGCCTAATGCTATTATAGAATGGATAGATTATCGTCTTCCTATTTTTGC
ATTCCTAAAGCATTTTAGTC

Product: Ubiquinol-cytochrome c reductase, iron-sulfur subunit

Products: NA

Alternate protein names: Rieske iron-sulfur protein; RISP [H]

Number of amino acids: Translated: 177; Mature: 176

Protein sequence:

>177_residues
MSDTEDNKNKQTTRRDFMVLTASSVAAIGAACTLWPLVDSLNPSADVLALSSIEVDLSNIAVGQTVTVKWQGKPVFITNR
TPDKIAEARAVKMSELIDPEADEARVKAGHDNWLVTIGICTHLGCVPLANQGEYDGWFCPCHGSQYDSSGRVRRGPAPLN
LAVPPYTFISDKKIRIG

Sequences:

>Translated_177_residues
MSDTEDNKNKQTTRRDFMVLTASSVAAIGAACTLWPLVDSLNPSADVLALSSIEVDLSNIAVGQTVTVKWQGKPVFITNR
TPDKIAEARAVKMSELIDPEADEARVKAGHDNWLVTIGICTHLGCVPLANQGEYDGWFCPCHGSQYDSSGRVRRGPAPLN
LAVPPYTFISDKKIRIG
>Mature_176_residues
SDTEDNKNKQTTRRDFMVLTASSVAAIGAACTLWPLVDSLNPSADVLALSSIEVDLSNIAVGQTVTVKWQGKPVFITNRT
PDKIAEARAVKMSELIDPEADEARVKAGHDNWLVTIGICTHLGCVPLANQGEYDGWFCPCHGSQYDSSGRVRRGPAPLNL
AVPPYTFISDKKIRIG

Specific function: Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis [H]

COG id: COG0723

COG function: function code C; Rieske Fe-S protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

Organism=Homo sapiens, GI163644321, Length=181, Percent_Identity=45.3038674033149, Blast_Score=175, Evalue=2e-44,
Organism=Caenorhabditis elegans, GI17540418, Length=184, Percent_Identity=45.1086956521739, Blast_Score=164, Evalue=2e-41,
Organism=Saccharomyces cerevisiae, GI6320811, Length=169, Percent_Identity=50.887573964497, Blast_Score=187, Evalue=7e-49,
Organism=Drosophila melanogaster, GI24580896, Length=141, Percent_Identity=53.1914893617021, Blast_Score=166, Evalue=6e-42,
Organism=Drosophila melanogaster, GI17864350, Length=109, Percent_Identity=37.6146788990826, Blast_Score=72, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017941
- InterPro:   IPR014349
- InterPro:   IPR005805
- InterPro:   IPR006311
- InterPro:   IPR019470
- InterPro:   IPR006317 [H]

Pfam domain/function: PF00355 Rieske; PF10399 UCR_Fe-S_N [H]

EC number: =1.10.2.2 [H]

Molecular weight: Translated: 19184; Mature: 19053

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: PS00199 RIESKE_1 ; PS00200 RIESKE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDTEDNKNKQTTRRDFMVLTASSVAAIGAACTLWPLVDSLNPSADVLALSSIEVDLSNI
CCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEHHHE
AVGQTVTVKWQGKPVFITNRTPDKIAEARAVKMSELIDPEADEARVKAGHDNWLVTIGIC
EECCEEEEEECCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCEEEEEEEE
THLGCVPLANQGEYDGWFCPCHGSQYDSSGRVRRGPAPLNLAVPPYTFISDKKIRIG
CCCCCEECCCCCCCCCEEEECCCCCCCCCCCEEECCCCEEEECCCEEEECCCEEECC
>Mature Secondary Structure 
SDTEDNKNKQTTRRDFMVLTASSVAAIGAACTLWPLVDSLNPSADVLALSSIEVDLSNI
CCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEHHHE
AVGQTVTVKWQGKPVFITNRTPDKIAEARAVKMSELIDPEADEARVKAGHDNWLVTIGIC
EECCEEEEEECCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCEEEEEEEE
THLGCVPLANQGEYDGWFCPCHGSQYDSSGRVRRGPAPLNLAVPPYTFISDKKIRIG
CCCCCEECCCCCCCCCEEEECCCCCCCCCCCEEECCCCEEEECCCEEEECCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA