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The map label for this gene is ccmB

Identifier: 229586518

GI number: 229586518

Start: 360649

End: 361296

Strand: Direct

Name: ccmB

Synonym: RAF_ORF0330

Alternate gene names: NA

Gene position: 360649-361296 (Clockwise)

Preceding gene: 229586517

Following gene: 229586519

Centisome position: 28.21

GC content: 24.85

Gene sequence:

>648_bases
ATGAATAGTCTATTTGTACTAATTAAGCGTGAATTGATAGTGCAGAATCGCATTAATAATATAATTAAATATCTAGTTAT
ATTTTTTTTATTTTGCATAATTAGTACTGTTTTAATTAATAGTGAAAGGGATATTAACAAATTCGGTTTAATTTTTTCGG
TCATTTGTTTATTAATTTCATTAATCGGTTTTTCTTCGGTTATATTTAAATCTGATTTGGAAGACGGAAGCTTAGAGTTA
TTATTATCAATTGTTAGTCATGAAAAAATTATATTGGCTAAATTTTTTGCTATATTTATCAGTAGTACGATAGGGCTGGT
TTTTGTTTTACCCATTATTTATGTCTTGTTTGATAAAACTTTGCTTGAGATAATATTTTTCTTTATTAGTGTATGGATAA
TATTAGTGTTATCAAGTAGTTTAGTAGTGTTATCCGGTAGCGTGCAATGTTATTTTACGAAGAATGCTAACTTTGTCGGT
ACGTTTATCATGCCGTTATTAATTCCGAATATTATAATGACAGGTTTAATATTACAAGATAATAACTTACAATTAATTTT
TATTATGATAGGAATTAATTTAGTATTTTTACCGATTTCATTCTTCTTGAGTTCCTGTTTAATTAAAAATATTTATAATA
TTACGTGA

Upstream 100 bases:

>100_bases
AAGCTACTTGCTCAGCATATTGCGATAGTTATTGTTGAAATTGGTATAGGTTTAACTGTTGCAGCTATTATGTACTTAAT
TTACAACGTATTTAATAATT

Downstream 100 bases:

>100_bases
TTTTGCTTTATTTTTACTAATGTAGTGATATAAAATAAGATAAATATTATTAATAAATTTTTTGAGCAAAATATATGTGG
CAGGCTTTACGAAGGTTAAT

Product: Heme exporter protein B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MNSLFVLIKRELIVQNRINNIIKYLVIFFLFCIISTVLINSERDINKFGLIFSVICLLISLIGFSSVIFKSDLEDGSLEL
LLSIVSHEKIILAKFFAIFISSTIGLVFVLPIIYVLFDKTLLEIIFFFISVWIILVLSSSLVVLSGSVQCYFTKNANFVG
TFIMPLLIPNIIMTGLILQDNNLQLIFIMIGINLVFLPISFFLSSCLIKNIYNIT

Sequences:

>Translated_215_residues
MNSLFVLIKRELIVQNRINNIIKYLVIFFLFCIISTVLINSERDINKFGLIFSVICLLISLIGFSSVIFKSDLEDGSLEL
LLSIVSHEKIILAKFFAIFISSTIGLVFVLPIIYVLFDKTLLEIIFFFISVWIILVLSSSLVVLSGSVQCYFTKNANFVG
TFIMPLLIPNIIMTGLILQDNNLQLIFIMIGINLVFLPISFFLSSCLIKNIYNIT
>Mature_215_residues
MNSLFVLIKRELIVQNRINNIIKYLVIFFLFCIISTVLINSERDINKFGLIFSVICLLISLIGFSSVIFKSDLEDGSLEL
LLSIVSHEKIILAKFFAIFISSTIGLVFVLPIIYVLFDKTLLEIIFFFISVWIILVLSSSLVVLSGSVQCYFTKNANFVG
TFIMPLLIPNIIMTGLILQDNNLQLIFIMIGINLVFLPISFFLSSCLIKNIYNIT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CcmB/CycW/HelB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003544 [H]

Pfam domain/function: PF03379 CcmB [H]

EC number: NA

Molecular weight: Translated: 24366; Mature: 24366

Theoretical pI: Translated: 7.92; Mature: 7.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSLFVLIKRELIVQNRINNIIKYLVIFFLFCIISTVLINSERDINKFGLIFSVICLLIS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
LIGFSSVIFKSDLEDGSLELLLSIVSHEKIILAKFFAIFISSTIGLVFVLPIIYVLFDKT
HHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLEIIFFFISVWIILVLSSSLVVLSGSVQCYFTKNANFVGTFIMPLLIPNIIMTGLILQD
HHHHHHHHHHHHHHHHHHCCHHEEECCEEEEEECCCCHHHHHHHHHHHHHHHHHHHEEEC
NNLQLIFIMIGINLVFLPISFFLSSCLIKNIYNIT
CCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNSLFVLIKRELIVQNRINNIIKYLVIFFLFCIISTVLINSERDINKFGLIFSVICLLIS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
LIGFSSVIFKSDLEDGSLELLLSIVSHEKIILAKFFAIFISSTIGLVFVLPIIYVLFDKT
HHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLEIIFFFISVWIILVLSSSLVVLSGSVQCYFTKNANFVGTFIMPLLIPNIIMTGLILQD
HHHHHHHHHHHHHHHHHHCCHHEEECCEEEEEECCCCHHHHHHHHHHHHHHHHHHHEEEC
NNLQLIFIMIGINLVFLPISFFLSSCLIKNIYNIT
CCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11557893 [H]