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The map label for this gene is hlpA

Identifier: 229586514

GI number: 229586514

Start: 356897

End: 357451

Strand: Direct

Name: hlpA

Synonym: RAF_ORF0326

Alternate gene names: NA

Gene position: 356897-357451 (Clockwise)

Preceding gene: 229586512

Following gene: 229586515

Centisome position: 27.91

GC content: 31.53

Gene sequence:

>555_bases
ATGATATACCGAATATTATGTTTATGCATATTCATAATAAATTTCTCAACGATTACGGAGGCACAAAATGTGCCAATTAA
AGAAGATAATTTTAAAGTTAGAGTAGCTGTTGCTGATGTACAATCTATATTGGAAGGTTCGATCGCTATAAAAGATTTGC
GTAATAAAATCGAAAAGCTTAATCATAAAATTCAAGAGAATATTGCTGCAAAAGAAGCAGAATTTAAACCGCTGGAAGAG
AAGCTGCTAAATGAGCGTTCTCATTTAAGTGAAACTGAATTTGAGCATAAAGTAAACGAATTTAATGCAAAAGTTAGCCA
CGTTAGAAAAGAAATTCAGATTAAGAAAACAAAGCTTGAACAAGCCCACGCTGAGGCTATGAGTAGAGTCCATGAAACAA
CTATTACAATAATTAGTGAACTTGCCGAGAAATATAACCTTAATTTGGTAATTCCAAGTGCTCAAGTCTTATATGCCAAA
AATAATTTGAATATAACTTCCGAAGTGACTTTTATGTTGAATGAGAGATTAAAAGAAGTAACGATAAACTATTGA

Upstream 100 bases:

>100_bases
ATCGCGGAATTTCAGGATACTGCCTGTGATACAAGATCCCGTGGTCAAGCCACGGGATGACAATTCTAGCCGATACCGTT
TAACCTAAAAGGATCAAAAG

Downstream 100 bases:

>100_bases
TAGTGTTTTATGGATTTTTGTGTGTCATTCCCGCGTAGGTGGTAATCCAGAAAAATAACTTCAATATTGATACAGAAGTT
ACATATTTGATAAAATAAAT

Product: Outer membrane protein

Products: NA

Alternate protein names: Outer Membrane Protein OmpH; OmpH Family Outer Membrane Protein

Number of amino acids: Translated: 184; Mature: 184

Protein sequence:

>184_residues
MIYRILCLCIFIINFSTITEAQNVPIKEDNFKVRVAVADVQSILEGSIAIKDLRNKIEKLNHKIQENIAAKEAEFKPLEE
KLLNERSHLSETEFEHKVNEFNAKVSHVRKEIQIKKTKLEQAHAEAMSRVHETTITIISELAEKYNLNLVIPSAQVLYAK
NNLNITSEVTFMLNERLKEVTINY

Sequences:

>Translated_184_residues
MIYRILCLCIFIINFSTITEAQNVPIKEDNFKVRVAVADVQSILEGSIAIKDLRNKIEKLNHKIQENIAAKEAEFKPLEE
KLLNERSHLSETEFEHKVNEFNAKVSHVRKEIQIKKTKLEQAHAEAMSRVHETTITIISELAEKYNLNLVIPSAQVLYAK
NNLNITSEVTFMLNERLKEVTINY
>Mature_184_residues
MIYRILCLCIFIINFSTITEAQNVPIKEDNFKVRVAVADVQSILEGSIAIKDLRNKIEKLNHKIQENIAAKEAEFKPLEE
KLLNERSHLSETEFEHKVNEFNAKVSHVRKEIQIKKTKLEQAHAEAMSRVHETTITIISELAEKYNLNLVIPSAQVLYAK
NNLNITSEVTFMLNERLKEVTINY

Specific function: Unknown

COG id: COG2825

COG function: function code M; Outer membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21248; Mature: 21248

Theoretical pI: Translated: 7.15; Mature: 7.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIYRILCLCIFIINFSTITEAQNVPIKEDNFKVRVAVADVQSILEGSIAIKDLRNKIEKL
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHH
NHKIQENIAAKEAEFKPLEEKLLNERSHLSETEFEHKVNEFNAKVSHVRKEIQIKKTKLE
HHHHHHHHHHHCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QAHAEAMSRVHETTITIISELAEKYNLNLVIPSAQVLYAKNNLNITSEVTFMLNERLKEV
HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCEEEEECCCCCCHHHHHHHHHHHHHHH
TINY
HCCC
>Mature Secondary Structure
MIYRILCLCIFIINFSTITEAQNVPIKEDNFKVRVAVADVQSILEGSIAIKDLRNKIEKL
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHH
NHKIQENIAAKEAEFKPLEEKLLNERSHLSETEFEHKVNEFNAKVSHVRKEIQIKKTKLE
HHHHHHHHHHHCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QAHAEAMSRVHETTITIISELAEKYNLNLVIPSAQVLYAKNNLNITSEVTFMLNERLKEV
HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCEEEEECCCCCCHHHHHHHHHHHHHHH
TINY
HCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA